| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170750838
Identifier: 170750838
GI number: 170750838
Start: 4731381
End: 4732094
Strand: Reverse
Name: 170750838
Synonym: Mrad2831_4449
Alternate gene names: NA
Gene position: 4732094-4731381 (Counterclockwise)
Preceding gene: 170750843
Following gene: 170750837
Centisome position: 77.86
GC content: 71.99
Gene sequence:
>714_bases ATGAGCCCCGCAGACGCTCCCCCGGCCGCCCCGCCGGCGAACCTTCCGGCGAGGGACGCCTACGCGACCGAGGCGATCTG CGCGCGGATCCTGGCGCGGCACCGGGACCGGATCAGCGTCCGGAAGGACCACGTCGCCGTCGCCAACCTCGCGCGGATCA TCGAGGCGGTGCTGAAGCTGTCGAGCCGGCAGGGCTTCCACGAGACGAGCCTGCGCGACCTCGCCCGGGCCTCGGGGCTC AGCATGGGCGGGCTCTACTCGTACTTCGACAACAAGAACACGCTGCTGGTGATGATCCTCACCGAGGTGGCCGAGACGGC CGAGGCGGTCCTGCGGCAGGCCCCGGCGGGGATCGCGGCGGATCCGGCCGCCCACCTGCGCTGGCTGATCGAGACCCATA TCCGCCTGACCGAGGCGATGCAGCCCTGGTTCGTCTTCGCCTTCATGGAGGCGAAGGGGTTCCCGGCCCCCGCCCGGACG ATGGCGACGGAGAGCGAGGCCGCCACGGAGCGCATCTTCGCCGAGGTCCTCGCCCGCGGCGCGGCGGCGGGCGTCTTCGC GGTCGCCGACGTCGACCTCACCGCCGCGCTGATCAAGCCGCTCCTGCAGGATTGGTACGTGAAGCGGGCCAAGCACCGGA AGCGCGGCATCCCGATCCAGCGCTACATCGCGGGCGTGACCGCCTTCGTCGAGAGGGCCATCGCGGCGGGCTGA
Upstream 100 bases:
>100_bases CCTGGATTCGTGCCTGGCAACGGGCTAGACCGCGGGAGCTGGCCCCGGCCCCGGCCGCGGCCCCGGCGGGCTCGCGCGGC GACGGAGCGACGATGGATCG
Downstream 100 bases:
>100_bases CGCCGCGCGGCGGACGAACAACCCTGGTCGAGGCCGCCGCGCGCCCTTATGCCGGGCTCGGAGACATTCCGGAGCGCGGG GAGCATGGCCGGACCGATCA
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: TetR Family Transcriptional Regulator; Transcriptional Regulator; HTH-Type Transcriptional Regulator
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MSPADAPPAAPPANLPARDAYATEAICARILARHRDRISVRKDHVAVANLARIIEAVLKLSSRQGFHETSLRDLARASGL SMGGLYSYFDNKNTLLVMILTEVAETAEAVLRQAPAGIAADPAAHLRWLIETHIRLTEAMQPWFVFAFMEAKGFPAPART MATESEAATERIFAEVLARGAAAGVFAVADVDLTAALIKPLLQDWYVKRAKHRKRGIPIQRYIAGVTAFVERAIAAG
Sequences:
>Translated_237_residues MSPADAPPAAPPANLPARDAYATEAICARILARHRDRISVRKDHVAVANLARIIEAVLKLSSRQGFHETSLRDLARASGL SMGGLYSYFDNKNTLLVMILTEVAETAEAVLRQAPAGIAADPAAHLRWLIETHIRLTEAMQPWFVFAFMEAKGFPAPART MATESEAATERIFAEVLARGAAAGVFAVADVDLTAALIKPLLQDWYVKRAKHRKRGIPIQRYIAGVTAFVERAIAAG >Mature_236_residues SPADAPPAAPPANLPARDAYATEAICARILARHRDRISVRKDHVAVANLARIIEAVLKLSSRQGFHETSLRDLARASGLS MGGLYSYFDNKNTLLVMILTEVAETAEAVLRQAPAGIAADPAAHLRWLIETHIRLTEAMQPWFVFAFMEAKGFPAPARTM ATESEAATERIFAEVLARGAAAGVFAVADVDLTAALIKPLLQDWYVKRAKHRKRGIPIQRYIAGVTAFVERAIAAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25722; Mature: 25591
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPADAPPAAPPANLPARDAYATEAICARILARHRDRISVRKDHVAVANLARIIEAVLKL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSRQGFHETSLRDLARASGLSMGGLYSYFDNKNTLLVMILTEVAETAEAVLRQAPAGIAA HHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCC DPAAHLRWLIETHIRLTEAMQPWFVFAFMEAKGFPAPARTMATESEAATERIFAEVLARG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AAAGVFAVADVDLTAALIKPLLQDWYVKRAKHRKRGIPIQRYIAGVTAFVERAIAAG HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SPADAPPAAPPANLPARDAYATEAICARILARHRDRISVRKDHVAVANLARIIEAVLKL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSRQGFHETSLRDLARASGLSMGGLYSYFDNKNTLLVMILTEVAETAEAVLRQAPAGIAA HHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCC DPAAHLRWLIETHIRLTEAMQPWFVFAFMEAKGFPAPARTMATESEAATERIFAEVLARG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AAAGVFAVADVDLTAALIKPLLQDWYVKRAKHRKRGIPIQRYIAGVTAFVERAIAAG HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA