| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170750836
Identifier: 170750836
GI number: 170750836
Start: 4729881
End: 4730228
Strand: Reverse
Name: 170750836
Synonym: Mrad2831_4447
Alternate gene names: NA
Gene position: 4730228-4729881 (Counterclockwise)
Preceding gene: 170750837
Following gene: 170750835
Centisome position: 77.83
GC content: 72.41
Gene sequence:
>348_bases ATGCCCATGATCGATTGGAACACCTACCGCCAGCAGGTCACCGCCGGCGTCGGACACTTCGCCAAGCTCAGCCCCGACAC GGTGCGGGGCTACGGCACCCTCAGCACCGCAGGCCAGAAGACCGGCCAGCTCGACGCCAAGACCCGCGAGCTGATCGCGG TGGCGGTGGCGATCTCCCTGCGCTGCGACGGCTGTATCACGGTCCACACCGACGCCGCCCGCAAGCTCGGCGCCACCGAG GCCGAGCTGGCCGAGGCCCTCGGGGTCGCCACCAGCCTCGGTGCCGGTGCCGCGGTCGTCTACGCGACCCGCGCGCTCGA CGCCTTCGCGGCCTCCGCCGAGGCGTAG
Upstream 100 bases:
>100_bases GCCGGCGGGTTGATCCGCGCGGTCATCAGCCTGCGCCGCGCGGCCATCGAGGGCGCGGACGGCCCCGATTACCTTCCTCG TCATCACGCAGGAGGTCGTC
Downstream 100 bases:
>100_bases CCCCTCCCCCCATCCGATTGAGCAAGGAGTCGTGTCATGAACACGCAGGTTCGCCGCGTCCTCGGCCTCGTCTCGGGGCC TGGCTCGAACCGCCTCGGCC
Product: alkylhydroperoxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MPMIDWNTYRQQVTAGVGHFAKLSPDTVRGYGTLSTAGQKTGQLDAKTRELIAVAVAISLRCDGCITVHTDAARKLGATE AELAEALGVATSLGAGAAVVYATRALDAFAASAEA
Sequences:
>Translated_115_residues MPMIDWNTYRQQVTAGVGHFAKLSPDTVRGYGTLSTAGQKTGQLDAKTRELIAVAVAISLRCDGCITVHTDAARKLGATE AELAEALGVATSLGAGAAVVYATRALDAFAASAEA >Mature_114_residues PMIDWNTYRQQVTAGVGHFAKLSPDTVRGYGTLSTAGQKTGQLDAKTRELIAVAVAISLRCDGCITVHTDAARKLGATEA ELAEALGVATSLGAGAAVVYATRALDAFAASAEA
Specific function: Unknown
COG id: COG0599
COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004675 - InterPro: IPR003779 [H]
Pfam domain/function: PF02627 CMD [H]
EC number: NA
Molecular weight: Translated: 11796; Mature: 11665
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMIDWNTYRQQVTAGVGHFAKLSPDTVRGYGTLSTAGQKTGQLDAKTRELIAVAVAISL CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEE RCDGCITVHTDAARKLGATEAELAEALGVATSLGAGAAVVYATRALDAFAASAEA ECCCEEEEECHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PMIDWNTYRQQVTAGVGHFAKLSPDTVRGYGTLSTAGQKTGQLDAKTRELIAVAVAISL CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEE RCDGCITVHTDAARKLGATEAELAEALGVATSLGAGAAVVYATRALDAFAASAEA ECCCEEEEECHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]