| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170750687
Identifier: 170750687
GI number: 170750687
Start: 4547814
End: 4548245
Strand: Reverse
Name: 170750687
Synonym: Mrad2831_4297
Alternate gene names: NA
Gene position: 4548245-4547814 (Counterclockwise)
Preceding gene: 170750688
Following gene: 170750686
Centisome position: 74.83
GC content: 66.2
Gene sequence:
>432_bases GTGCTGTACGACTGGATCAAGGCCCTCCACGTCATCAGCCTGATCGCCTGGATGGCCGGGATGCTCTACCTGCCCCGGCT GTTCGTCTACCACGCGAGCCTGCCGCCCGGCGCGGAGGCGCAGTCGGCGACCTTCAAGGTCATGGAGCGCCGCCTGCTCA AGGCGATCATGAACCCCGCGATGATCGCTACCTGGGCGTTCGGGCTGGCGCTCGCCTGGATGAGCGGCTTCTACGCGAGC GTCTGGCTGCAGGCGAAGTTCGTGCTGGTGCTGGCGATGTCGGGCATCCACGGCTGGCTCGCCCGGATGGTCAAGGATTT CGCCGCCGACCGGAACACCCGCGGCCACAAGTTCTACCGGGTGCTCAACGAGGTGCCGACGCTGCTGATGATCGGCATCG TCATCCTGGCGATCGTCAAGCCGGGCCTCTGA
Upstream 100 bases:
>100_bases CACATCTTCAACCTCGGCCACGGCATCACGCCGCAGACGCCGGTGGCCCATGTCGAGCGGATGCTCGCGCGGCTGCGCGG CCAGGGCTGAGGTCGGGCGC
Downstream 100 bases:
>100_bases TCCCGGGATCCCGTGATCCCAGGCGTCTGCCCCGGCGGTCGGAGCCTTTTCGCCGCCGGTCCGTTGGGAGGCCATGTCGA AGCCCCTCGTCCTCGCCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MLYDWIKALHVISLIAWMAGMLYLPRLFVYHASLPPGAEAQSATFKVMERRLLKAIMNPAMIATWAFGLALAWMSGFYAS VWLQAKFVLVLAMSGIHGWLARMVKDFAADRNTRGHKFYRVLNEVPTLLMIGIVILAIVKPGL
Sequences:
>Translated_143_residues MLYDWIKALHVISLIAWMAGMLYLPRLFVYHASLPPGAEAQSATFKVMERRLLKAIMNPAMIATWAFGLALAWMSGFYAS VWLQAKFVLVLAMSGIHGWLARMVKDFAADRNTRGHKFYRVLNEVPTLLMIGIVILAIVKPGL >Mature_143_residues MLYDWIKALHVISLIAWMAGMLYLPRLFVYHASLPPGAEAQSATFKVMERRLLKAIMNPAMIATWAFGLALAWMSGFYAS VWLQAKFVLVLAMSGIHGWLARMVKDFAADRNTRGHKFYRVLNEVPTLLMIGIVILAIVKPGL
Specific function: Unknown
COG id: COG1981
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0093 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014351 - InterPro: IPR005265 [H]
Pfam domain/function: PF03653 UPF0093 [H]
EC number: NA
Molecular weight: Translated: 16094; Mature: 16094
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.0 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYDWIKALHVISLIAWMAGMLYLPRLFVYHASLPPGAEAQSATFKVMERRLLKAIMNPA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCHH MIATWAFGLALAWMSGFYASVWLQAKFVLVLAMSGIHGWLARMVKDFAADRNTRGHKFYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH VLNEVPTLLMIGIVILAIVKPGL HHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLYDWIKALHVISLIAWMAGMLYLPRLFVYHASLPPGAEAQSATFKVMERRLLKAIMNPA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCHH MIATWAFGLALAWMSGFYASVWLQAKFVLVLAMSGIHGWLARMVKDFAADRNTRGHKFYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH VLNEVPTLLMIGIVILAIVKPGL HHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8606169 [H]