| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is drp35 [H]
Identifier: 170750529
GI number: 170750529
Start: 4392800
End: 4393720
Strand: Reverse
Name: drp35 [H]
Synonym: Mrad2831_4136
Alternate gene names: 170750529
Gene position: 4393720-4392800 (Counterclockwise)
Preceding gene: 170750530
Following gene: 170750528
Centisome position: 72.29
GC content: 70.79
Gene sequence:
>921_bases ATGTCGTTCTTCGCTCCCCCGCCGGCCGTGACGGCCGAGGTCTTCACGCGCCTGCCCGACCGCTTCCGCAAGGTCCGGCC GACAGCCTGGGCGAACGCCAACCGGGGCGGGCACGCCATCGACTCCTTCCTGGAGGGCCCCGTCTTCGACCGGGCCGGCC GGCTCTACGTCACCGACATTCCCTTCGGCCGGATCTTCCGCATCGACCCGGCCGGCGAATGGGAGCTCGTGGCCGAGTAC GACGGCTGGCCGAACGGCCTGAAGATCCACCGCGACGGGCGGATCTTCATCACCTGCTACAGGCGCGGCCTGATGCTCCT CGATCCCGATACGGGGGCGGTGACGCCGTTCCTGGAGACGGCGGGCTCGGAGGGCTTTCGCGGGGTCAACGACCTGACCT TCGCGCGGAACGGCGACCTCTACTTCACCGACCAGGGCCAGACCGGGCTGCAGGACCCGACCGGCCGGGTCTACCGCCTG CGCCCCTCCGGCGAGCTGACCTGCCTCGTCGACACGATCCCGAGCCCGAACGGCATCGTCATCGACGATGCCATGGGGAG CCTGTTCGTGGCCGTGACCCGCGCCCAGCAGATCTGGCGGGTGCCCCTGAACGCCAGCGGCCTCGTCGCCAAGGTCGGCG TGTTCGCGCAGCTGCACGGCGGCCTCGGCGGTCCGGACGGCATCGCGCTCGATGCCGAGGGCTGCCTGATCGTCGCCCAT ACCGGGTTCGGCTCGATCTGGCGGCTGTCGCCCGTCGCCGAGCCGCTGCTGCGGGTGAAGTCTCCCGCCGGGATCTCGAC CACCAACGTCGCCTACGGCGGCCCGGACGGCGCGACCCTGTTCATCACCGAATCCCAGACCGGCAGCATCCTGACGGCGC GGATGCCGGCCCCCGGCCAGACCCTCTTCTCGCATCACTGA
Upstream 100 bases:
>100_bases ATCTGCGTGATCCTGATCAGCCGCGCCCATGCCCGCGAGGCCCGGACGGCGGCGCTGCCAGCCTGATCCACCGCTCCCGC ACCCACACCGAGGCCACGCG
Downstream 100 bases:
>100_bases CCGGACCGGACGGATGACCCCCTCGATGACCCGCCGCGCGCACATCGCGGCCCTCGTGGCCGGCGCCGCCGGCCTGCGGC CCGCAGCGGCGCAGACCGTC
Product: SMP-30/gluconolaconase/LRE domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MSFFAPPPAVTAEVFTRLPDRFRKVRPTAWANANRGGHAIDSFLEGPVFDRAGRLYVTDIPFGRIFRIDPAGEWELVAEY DGWPNGLKIHRDGRIFITCYRRGLMLLDPDTGAVTPFLETAGSEGFRGVNDLTFARNGDLYFTDQGQTGLQDPTGRVYRL RPSGELTCLVDTIPSPNGIVIDDAMGSLFVAVTRAQQIWRVPLNASGLVAKVGVFAQLHGGLGGPDGIALDAEGCLIVAH TGFGSIWRLSPVAEPLLRVKSPAGISTTNVAYGGPDGATLFITESQTGSILTARMPAPGQTLFSHH
Sequences:
>Translated_306_residues MSFFAPPPAVTAEVFTRLPDRFRKVRPTAWANANRGGHAIDSFLEGPVFDRAGRLYVTDIPFGRIFRIDPAGEWELVAEY DGWPNGLKIHRDGRIFITCYRRGLMLLDPDTGAVTPFLETAGSEGFRGVNDLTFARNGDLYFTDQGQTGLQDPTGRVYRL RPSGELTCLVDTIPSPNGIVIDDAMGSLFVAVTRAQQIWRVPLNASGLVAKVGVFAQLHGGLGGPDGIALDAEGCLIVAH TGFGSIWRLSPVAEPLLRVKSPAGISTTNVAYGGPDGATLFITESQTGSILTARMPAPGQTLFSHH >Mature_305_residues SFFAPPPAVTAEVFTRLPDRFRKVRPTAWANANRGGHAIDSFLEGPVFDRAGRLYVTDIPFGRIFRIDPAGEWELVAEYD GWPNGLKIHRDGRIFITCYRRGLMLLDPDTGAVTPFLETAGSEGFRGVNDLTFARNGDLYFTDQGQTGLQDPTGRVYRLR PSGELTCLVDTIPSPNGIVIDDAMGSLFVAVTRAQQIWRVPLNASGLVAKVGVFAQLHGGLGGPDGIALDAEGCLIVAHT GFGSIWRLSPVAEPLLRVKSPAGISTTNVAYGGPDGATLFITESQTGSILTARMPAPGQTLFSHH
Specific function: Exhibits lactonase activity. Acts in cells with perturbed membrane integrity and is possibly related to the membrane homeostasis [H]
COG id: COG3386
COG function: function code G; Gluconolactonase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SMP-30/CGR1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR013658 [H]
Pfam domain/function: PF08450 SGL [H]
EC number: NA
Molecular weight: Translated: 32938; Mature: 32807
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFFAPPPAVTAEVFTRLPDRFRKVRPTAWANANRGGHAIDSFLEGPVFDRAGRLYVTDI CCCCCCCCCHHHHHHHHCHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEC PFGRIFRIDPAGEWELVAEYDGWPNGLKIHRDGRIFITCYRRGLMLLDPDTGAVTPFLET CCCEEEEECCCCCEEEEEECCCCCCCEEEEECCEEEEEEEECCEEEECCCCCCCCHHHHH AGSEGFRGVNDLTFARNGDLYFTDQGQTGLQDPTGRVYRLRPSGELTCLVDTIPSPNGIV CCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCEE IDDAMGSLFVAVTRAQQIWRVPLNASGLVAKVGVFAQLHGGLGGPDGIALDAEGCLIVAH EECCCCCEEEHHHHHHHEEECCCCCCCHHHHHHHHEEECCCCCCCCCEEEECCCEEEEEE TGFGSIWRLSPVAEPLLRVKSPAGISTTNVAYGGPDGATLFITESQTGSILTARMPAPGQ CCCCCEEEECHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEECCCCCCEEEEECCCCCC TLFSHH HHCCCC >Mature Secondary Structure SFFAPPPAVTAEVFTRLPDRFRKVRPTAWANANRGGHAIDSFLEGPVFDRAGRLYVTDI CCCCCCCCHHHHHHHHCHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEC PFGRIFRIDPAGEWELVAEYDGWPNGLKIHRDGRIFITCYRRGLMLLDPDTGAVTPFLET CCCEEEEECCCCCEEEEEECCCCCCCEEEEECCEEEEEEEECCEEEECCCCCCCCHHHHH AGSEGFRGVNDLTFARNGDLYFTDQGQTGLQDPTGRVYRLRPSGELTCLVDTIPSPNGIV CCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCEE IDDAMGSLFVAVTRAQQIWRVPLNASGLVAKVGVFAQLHGGLGGPDGIALDAEGCLIVAH EECCCCCEEEHHHHHHHEEECCCCCCCHHHHHHHHEEECCCCCCCCCEEEECCCEEEEEE TGFGSIWRLSPVAEPLLRVKSPAGISTTNVAYGGPDGATLFITESQTGSILTARMPAPGQ CCCCCEEEECHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEECCCCCCEEEEECCCCCC TLFSHH HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA