| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is parB [H]
Identifier: 170750487
GI number: 170750487
Start: 4346236
End: 4347156
Strand: Direct
Name: parB [H]
Synonym: Mrad2831_4094
Alternate gene names: 170750487
Gene position: 4346236-4347156 (Clockwise)
Preceding gene: 170750486
Following gene: 170750488
Centisome position: 71.51
GC content: 72.64
Gene sequence:
>921_bases GTGTGGAGCGTGACACGGGTGGCGATCATGGCGGAGGAGGGGGCGAAGCCTCGACTGGGGCGCGGGCTCGCGGCGCTGAT CGGTGACTTCAACGAGGCCGGCCGCGCCTCGGCCAAGGCCGAGGAGCAGCGCAGGGTCCAGATCGAGTTCCTGCGCGCCA ACCCGCGCAACCCGCGCCGGAGCTTCGCCGAGACGGAGCTGTCCGAGCTGGCGGCCTCGATCGGTCAGCGGGGCATCATC CAGCCGATCGTGGTCCGCCCGATCGGCGACGTGCCCGGGACCTACGAGATCGTGGCCGGCGAGCGGCGCTGGCGGGCCGC CCAGCGCGCCGGCCTCGACGAGGTGCCGGTGGTGGTGGTCGAGATCGACGACCGCGGCTCGCTGGAATTCGCCATCCTGG AGAACGTCCAGCGCACCGACCTCAACGCGATCGAGGAGGCGTCCGGGTACGAGCGCCTGATGAAGGATTTCTCGTACACC CAGAAGGAGCTGGCCGAGATCCTGGGCAAGAGCCGCAGCCACCTCGCCAACACGCTCCGGCTGCTCAACCTGCCGCTGTC CGTGCAGGAGCGGGTCACCGCCGGCGAGCTGACCGCCGGCCACGCCCGCGCGCTGCTGGCCGTGCGCGATCCCGAGGCGA CGGCGCGCCGCGTCGTGGCCGAGAGCCTGTCGGTCCGGGACGTGGAGGCCATCGCCTCCGCGGAGGCTGCCCCGGCCGAG ACGCCGCGCCCGGGGCGCCCGCGCCTCTCGGCCGAGCGCCCCGCGACGGTGCGCGACCTGGAGCTGCGGATCCACCGGGC GCTCGGCGTCCCGGTCTCCTACAAGCCGAAGGACGCCGATTCGGGCGAGATCCGCATCCGTTACGAGACCCAGGACGAGC TGCAGGCCCTGCTCAACCGGTTCAAGGTCTCGGACGCCTGA
Upstream 100 bases:
>100_bases CAGGCCTACCTGCGCCTCGCCTCGGAGGTGATCCAGCGCGAGGGCCGGGTTCCGGCCGCGGCCTGACGGATTTGAGTCCC CCTCCCGGTACGAGGGGCGA
Downstream 100 bases:
>100_bases GGCGGCGCCGTCGGCGCCCCGTAGAGCGGAGGAGCGGAGCTTGGCCGAGCAGGGCGGCGCGGCGGCGCGGAAGTTCGACG CCGACCGGGCCGGGGCGTAC
Product: parB-like partition protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MWSVTRVAIMAEEGAKPRLGRGLAALIGDFNEAGRASAKAEEQRRVQIEFLRANPRNPRRSFAETELSELAASIGQRGII QPIVVRPIGDVPGTYEIVAGERRWRAAQRAGLDEVPVVVVEIDDRGSLEFAILENVQRTDLNAIEEASGYERLMKDFSYT QKELAEILGKSRSHLANTLRLLNLPLSVQERVTAGELTAGHARALLAVRDPEATARRVVAESLSVRDVEAIASAEAAPAE TPRPGRPRLSAERPATVRDLELRIHRALGVPVSYKPKDADSGEIRIRYETQDELQALLNRFKVSDA
Sequences:
>Translated_306_residues MWSVTRVAIMAEEGAKPRLGRGLAALIGDFNEAGRASAKAEEQRRVQIEFLRANPRNPRRSFAETELSELAASIGQRGII QPIVVRPIGDVPGTYEIVAGERRWRAAQRAGLDEVPVVVVEIDDRGSLEFAILENVQRTDLNAIEEASGYERLMKDFSYT QKELAEILGKSRSHLANTLRLLNLPLSVQERVTAGELTAGHARALLAVRDPEATARRVVAESLSVRDVEAIASAEAAPAE TPRPGRPRLSAERPATVRDLELRIHRALGVPVSYKPKDADSGEIRIRYETQDELQALLNRFKVSDA >Mature_306_residues MWSVTRVAIMAEEGAKPRLGRGLAALIGDFNEAGRASAKAEEQRRVQIEFLRANPRNPRRSFAETELSELAASIGQRGII QPIVVRPIGDVPGTYEIVAGERRWRAAQRAGLDEVPVVVVEIDDRGSLEFAILENVQRTDLNAIEEASGYERLMKDFSYT QKELAEILGKSRSHLANTLRLLNLPLSVQERVTAGELTAGHARALLAVRDPEATARRVVAESLSVRDVEAIASAEAAPAE TPRPGRPRLSAERPATVRDLELRIHRALGVPVSYKPKDADSGEIRIRYETQDELQALLNRFKVSDA
Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]
COG id: COG1475
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004437 - InterPro: IPR003115 - InterPro: IPR013741 [H]
Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]
EC number: NA
Molecular weight: Translated: 33738; Mature: 33738
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWSVTRVAIMAEEGAKPRLGRGLAALIGDFNEAGRASAKAEEQRRVQIEFLRANPRNPRR CCCCEEEEEEECCCCCCCHHHHHHHHHCCCCHHCCCHHHHHHHHCEEEEEEECCCCCHHH SFAETELSELAASIGQRGIIQPIVVRPIGDVPGTYEIVAGERRWRAAQRAGLDEVPVVVV HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEECHHHHHHHHHCCCCCCCEEEE EIDDRGSLEFAILENVQRTDLNAIEEASGYERLMKDFSYTQKELAEILGKSRSHLANTLR EECCCCCEEHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LLNLPLSVQERVTAGELTAGHARALLAVRDPEATARRVVAESLSVRDVEAIASAEAAPAE HHCCCCHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCHHHHHHHHHCCCCCCC TPRPGRPRLSAERPATVRDLELRIHRALGVPVSYKPKDADSGEIRIRYETQDELQALLNR CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHH FKVSDA HCCCCC >Mature Secondary Structure MWSVTRVAIMAEEGAKPRLGRGLAALIGDFNEAGRASAKAEEQRRVQIEFLRANPRNPRR CCCCEEEEEEECCCCCCCHHHHHHHHHCCCCHHCCCHHHHHHHHCEEEEEEECCCCCHHH SFAETELSELAASIGQRGIIQPIVVRPIGDVPGTYEIVAGERRWRAAQRAGLDEVPVVVV HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEECHHHHHHHHHCCCCCCCEEEE EIDDRGSLEFAILENVQRTDLNAIEEASGYERLMKDFSYTQKELAEILGKSRSHLANTLR EECCCCCEEHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LLNLPLSVQERVTAGELTAGHARALLAVRDPEATARRVVAESLSVRDVEAIASAEAAPAE HHCCCCHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCHHHHHHHHHCCCCCCC TPRPGRPRLSAERPATVRDLELRIHRALGVPVSYKPKDADSGEIRIRYETQDELQALLNR CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHH FKVSDA HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9054507 [H]