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The map label for this gene is petR [H]

Identifier: 170750462

GI number: 170750462

Start: 4318662

End: 4319369

Strand: Reverse

Name: petR [H]

Synonym: Mrad2831_4069

Alternate gene names: 170750462

Gene position: 4319369-4318662 (Counterclockwise)

Preceding gene: 170750463

Following gene: 170750459

Centisome position: 71.07

GC content: 73.16

Gene sequence:

>708_bases
GTGAGCCACGCTGCCCGGTCCGACCTGCCCGACGAGGCACCCCACGTCCTCGTGGTCGACGACGACCGTCGCCTGCGCGA
GCTGCTCGCCCGCTACCTCACCGACCAGGGCTTCCGGGTCACCGCGGCGGCGAGCGCCGCGGAGGCGCGGGCGCGGGCCC
AGAGCGTCGTGTTCGACGCCATGGTGCTCGACGTGATGATGCCCGGCGAGAACGGCTTCGACTACGCGCGCAGCGTGCGC
GAGACCTCCCGGGTGCCGATCCTGATGCTCACGGCGCGCTCCAACCCGAACGACCGGGTGATGGGGCTGGAGATCGGCGC
GGACGATTACCTGCCGAAGCCGTTCGAGCCGCGGGAGCTGACGCTGCGGCTCAACAACATCATCAAGCGCAGCGCGCGGC
CCCGCCCGGCCTCCGCCGAGGCGGTCACCTTCGGGCCGTTCGCGTTCCGGATCGACCGGGGCGAGCTGCGCCGGGACGAC
GAGCTGATCCGCATCACCGAGCGCGAGCGCGAGATCCTGACGATCCTGGCGGCGGCGGGCGGCGCCAATGTCGAGCGCGA
GCAGCTCGCCGGGCCAGGGGGCGCCGCGGCGGAGCGGACCGTCGACGTGCAGATCAACCGCCTGCGCCGCAAGACCGAGG
TCGACCCCGCCAACCCGGTCTTCCTGCAGACCGTGCGGGGCGTCGGCTACCGGCTCGCGGTCGACTGA

Upstream 100 bases:

>100_bases
TGATGGCGATGATCGAGCCGGAGGACCGGCCGGCGGTCCAGCGCCTGATGGCGCGGCGCGGGGGCGGGGCCGAGGGGCGC
CTCGGCGCGGAGGAGCCCGC

Downstream 100 bases:

>100_bases
GCCGCGCGCGGGCCGGCGCCGGGCGGCTCAGACCACCCGCGGCGCGTCGGGCTTCAGCTTGAGGGCCTTGGCGATCCGGG
TGGACAGGCTGCCTACGATG

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MSHAARSDLPDEAPHVLVVDDDRRLRELLARYLTDQGFRVTAAASAAEARARAQSVVFDAMVLDVMMPGENGFDYARSVR
ETSRVPILMLTARSNPNDRVMGLEIGADDYLPKPFEPRELTLRLNNIIKRSARPRPASAEAVTFGPFAFRIDRGELRRDD
ELIRITEREREILTILAAAGGANVEREQLAGPGGAAAERTVDVQINRLRRKTEVDPANPVFLQTVRGVGYRLAVD

Sequences:

>Translated_235_residues
MSHAARSDLPDEAPHVLVVDDDRRLRELLARYLTDQGFRVTAAASAAEARARAQSVVFDAMVLDVMMPGENGFDYARSVR
ETSRVPILMLTARSNPNDRVMGLEIGADDYLPKPFEPRELTLRLNNIIKRSARPRPASAEAVTFGPFAFRIDRGELRRDD
ELIRITEREREILTILAAAGGANVEREQLAGPGGAAAERTVDVQINRLRRKTEVDPANPVFLQTVRGVGYRLAVD
>Mature_234_residues
SHAARSDLPDEAPHVLVVDDDRRLRELLARYLTDQGFRVTAAASAAEARARAQSVVFDAMVLDVMMPGENGFDYARSVRE
TSRVPILMLTARSNPNDRVMGLEIGADDYLPKPFEPRELTLRLNNIIKRSARPRPASAEAVTFGPFAFRIDRGELRRDDE
LIRITEREREILTILAAAGGANVEREQLAGPGGAAAERTVDVQINRLRRKTEVDPANPVFLQTVRGVGYRLAVD

Specific function: Necessary for photosynthetic and respiratory growth. Probable promoter-specific protein mediating the interaction between DNA and RNA polymerase [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=233, Percent_Identity=42.9184549356223, Blast_Score=177, Evalue=5e-46,
Organism=Escherichia coli, GI1787229, Length=230, Percent_Identity=36.9565217391304, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1790863, Length=234, Percent_Identity=33.3333333333333, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1788394, Length=235, Percent_Identity=32.3404255319149, Blast_Score=123, Evalue=8e-30,
Organism=Escherichia coli, GI2367329, Length=224, Percent_Identity=35.7142857142857, Blast_Score=123, Evalue=9e-30,
Organism=Escherichia coli, GI1786599, Length=231, Percent_Identity=33.3333333333333, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI87082012, Length=221, Percent_Identity=31.2217194570136, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI1786784, Length=224, Percent_Identity=33.4821428571429, Blast_Score=107, Evalue=5e-25,
Organism=Escherichia coli, GI1787375, Length=220, Percent_Identity=33.6363636363636, Blast_Score=107, Evalue=6e-25,
Organism=Escherichia coli, GI1786911, Length=224, Percent_Identity=30.8035714285714, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1790860, Length=225, Percent_Identity=32.4444444444444, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1790552, Length=225, Percent_Identity=28.4444444444444, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1789402, Length=223, Percent_Identity=29.5964125560538, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI145693140, Length=236, Percent_Identity=27.9661016949153, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1790299, Length=102, Percent_Identity=34.3137254901961, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26103; Mature: 25972

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHAARSDLPDEAPHVLVVDDDRRLRELLARYLTDQGFRVTAAASAAEARARAQSVVFDA
CCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHH
MVLDVMMPGENGFDYARSVRETSRVPILMLTARSNPNDRVMGLEIGADDYLPKPFEPREL
HHHEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCHHE
TLRLNNIIKRSARPRPASAEAVTFGPFAFRIDRGELRRDDELIRITEREREILTILAAAG
EEHHHHHHHHCCCCCCCCCCEEEECCEEEEECCCCCCCCCCEEEEHHHHHEEEEEEEECC
GANVEREQLAGPGGAAAERTVDVQINRLRRKTEVDPANPVFLQTVRGVGYRLAVD
CCCCCHHHHCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCHHHHHHHCCCEEEEEC
>Mature Secondary Structure 
SHAARSDLPDEAPHVLVVDDDRRLRELLARYLTDQGFRVTAAASAAEARARAQSVVFDA
CCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHH
MVLDVMMPGENGFDYARSVRETSRVPILMLTARSNPNDRVMGLEIGADDYLPKPFEPREL
HHHEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCHHE
TLRLNNIIKRSARPRPASAEAVTFGPFAFRIDRGELRRDDELIRITEREREILTILAAAG
EEHHHHHHHHCCCCCCCCCCEEEECCEEEEECCCCCCCCCCEEEEHHHHHEEEEEEEECC
GANVEREQLAGPGGAAAERTVDVQINRLRRKTEVDPANPVFLQTVRGVGYRLAVD
CCCCCHHHHCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCHHHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1323023 [H]