| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170750349
Identifier: 170750349
GI number: 170750349
Start: 4205055
End: 4206500
Strand: Direct
Name: 170750349
Synonym: Mrad2831_3952
Alternate gene names: NA
Gene position: 4205055-4206500 (Clockwise)
Preceding gene: 170750348
Following gene: 170750350
Centisome position: 69.19
GC content: 75.17
Gene sequence:
>1446_bases ATGTCTGACCTGTCCGACGGGCCGCCCCCGGCGGAGGCGGGCCGCTTCGTCACCGGCTCGATCCTCCGCCACGTCGTCGT GATGGCCGCCACCGGCTCGGTGGGGCTGATGGCGATCTTCGTCGTCGACCTCCTGTCGCTGCTCTACGTCTCGACGCTGG GCGACCCGAACCTCACGGCGGCGGTCGGCTTCGCCGGCATCGTGCAGTTCTTCGCCACGGCGGTGAATATCGGCCTGATG ATCGCGGCCGGCGCCCTGGTGGGGAAGGCCGTCGGCGCGCGCGACCCGGCGGCGGCGCGGCGCCTCGCGACGTCCGCGCT GGTCCTCGGCAGCCTCGTGGCCGCCGTCATCGCGGGGCTGATCGCGCTGCTGGCCGGCCCGCTCCTGGCCCTGATCGGCG CCGAGGGCGAGGCGCTGCGCGTGGCCGTCCTGTTCCTCCACATCACCCTGCCGTCGAACCTGCTGCTCGCCGCCGGCATG CTGTTCACCGGCCTGCTGCGAGCGGTCGGCGAGGCGGGTCAGGCGATGGCGGTCACGCTCGCCGGCGCCGTCGTCACCGC GTTCCTCGACCCGCTGCTGATCTTCGGGGCGGGCCTCGGCGTGACGGGCGCGGCGATCACGGTCTGCGTGGCGCGCGCGA CCTTCGTGGCGGTGGGCATCCGCGGCGTCGCGCGGCACGGGCTCCTCGGCCGGCCGCGCCTGCCCGACCTGCCGCCCGAC GCGGCCGCCCTGGCGGGGGTCGCGGGCCCGGCCGTGCTCACCAACCTCGCACCCTCGGTGGCGAGCGCCTTCCTGGCGCG CCTTTTTGCCGGCTACGGAGCGGATGCGGTCGCCGCCGCTTCGGTGATCGACCGGCTGACGCCGGTGGCTTTCGGCGGCC TGTTCGCGCTGTCGGGGGCGATCGGCCCGATCCTGGCGCAGAACTGGGGTGCGGGCCGGTTCGATCGGATGCGCGGCGTG CTCGGCGCGGCGATCCGGGTGACGCTGGCCTACTGCGCCGGGGTCTGGCTTCTCCTGGCGCTCGGCCGGGAGTGGCTCGC CGCCCTGTTCGGCCTGCAGGGGGGCGCGGCCGAGCTGTTCGGCTTCTTCTGCCTCGTCGGTGGCGCGATCTGGTTCTTCA ACGGGCTGCTGTTCCTCGGCAACGCCGCCTTCAACAATCTCGGCTTCCCGCTGCGCTCGACGCTGCTGAACTGGGGCCGG GCGACGCTCGGGACGATCCCGCCGGCGATGCTCGGCGCGGCGCTCTACGGCCCCCGCGGGGTGGTGGCCGGGATGGGGAT CGGCTCCCTGATCTTCGGGGCGCTCGGCATCCTGCTGGCCCGCCGCACGGTCGACCGGCTGGAGGGAAGCGGTCCGCGGC GGCCGGGGGCGGACATCGCCGCGGAGGCGCCCCAGCGCGCGGCGCCGCTGCCGGCGGGGCACGCCCATCCCGAGCCGATG ACCTGA
Upstream 100 bases:
>100_bases AGCCCGCCCTGGCCCCGCAGGAGACGGAGGCCGCCGAGGAATCCGATCCGGAGACCGAGCTCGAAGCGGAAGGCAGCGCC CGGGATGCGTGACGGGCCGG
Downstream 100 bases:
>100_bases GACGGCGGCGGCAAGGCACAAGTTCCGCGGGTGGGAACTGGTATTTCCCCGCGCAAAGGGTCACGATGCCCTGTCCCGGA CGGTCCCGGCCGGGACAGAG
Product: multi anti extrusion protein MatE
Products: NA
Alternate protein names: ORF 1 [H]
Number of amino acids: Translated: 481; Mature: 480
Protein sequence:
>481_residues MSDLSDGPPPAEAGRFVTGSILRHVVVMAATGSVGLMAIFVVDLLSLLYVSTLGDPNLTAAVGFAGIVQFFATAVNIGLM IAAGALVGKAVGARDPAAARRLATSALVLGSLVAAVIAGLIALLAGPLLALIGAEGEALRVAVLFLHITLPSNLLLAAGM LFTGLLRAVGEAGQAMAVTLAGAVVTAFLDPLLIFGAGLGVTGAAITVCVARATFVAVGIRGVARHGLLGRPRLPDLPPD AAALAGVAGPAVLTNLAPSVASAFLARLFAGYGADAVAAASVIDRLTPVAFGGLFALSGAIGPILAQNWGAGRFDRMRGV LGAAIRVTLAYCAGVWLLLALGREWLAALFGLQGGAAELFGFFCLVGGAIWFFNGLLFLGNAAFNNLGFPLRSTLLNWGR ATLGTIPPAMLGAALYGPRGVVAGMGIGSLIFGALGILLARRTVDRLEGSGPRRPGADIAAEAPQRAAPLPAGHAHPEPM T
Sequences:
>Translated_481_residues MSDLSDGPPPAEAGRFVTGSILRHVVVMAATGSVGLMAIFVVDLLSLLYVSTLGDPNLTAAVGFAGIVQFFATAVNIGLM IAAGALVGKAVGARDPAAARRLATSALVLGSLVAAVIAGLIALLAGPLLALIGAEGEALRVAVLFLHITLPSNLLLAAGM LFTGLLRAVGEAGQAMAVTLAGAVVTAFLDPLLIFGAGLGVTGAAITVCVARATFVAVGIRGVARHGLLGRPRLPDLPPD AAALAGVAGPAVLTNLAPSVASAFLARLFAGYGADAVAAASVIDRLTPVAFGGLFALSGAIGPILAQNWGAGRFDRMRGV LGAAIRVTLAYCAGVWLLLALGREWLAALFGLQGGAAELFGFFCLVGGAIWFFNGLLFLGNAAFNNLGFPLRSTLLNWGR ATLGTIPPAMLGAALYGPRGVVAGMGIGSLIFGALGILLARRTVDRLEGSGPRRPGADIAAEAPQRAAPLPAGHAHPEPM T >Mature_480_residues SDLSDGPPPAEAGRFVTGSILRHVVVMAATGSVGLMAIFVVDLLSLLYVSTLGDPNLTAAVGFAGIVQFFATAVNIGLMI AAGALVGKAVGARDPAAARRLATSALVLGSLVAAVIAGLIALLAGPLLALIGAEGEALRVAVLFLHITLPSNLLLAAGML FTGLLRAVGEAGQAMAVTLAGAVVTAFLDPLLIFGAGLGVTGAAITVCVARATFVAVGIRGVARHGLLGRPRLPDLPPDA AALAGVAGPAVLTNLAPSVASAFLARLFAGYGADAVAAASVIDRLTPVAFGGLFALSGAIGPILAQNWGAGRFDRMRGVL GAAIRVTLAYCAGVWLLLALGREWLAALFGLQGGAAELFGFFCLVGGAIWFFNGLLFLGNAAFNNLGFPLRSTLLNWGRA TLGTIPPAMLGAALYGPRGVVAGMGIGSLIFGALGILLARRTVDRLEGSGPRRPGADIAAEAPQRAAPLPAGHAHPEPMT
Specific function: May be a membrane-bound protein, possibly involved in IAA or IAA-Lysine transport [H]
COG id: COG0534
COG function: function code V; Na+-driven multidrug efflux pump
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002528 - InterPro: IPR015522 [H]
Pfam domain/function: PF01554 MatE [H]
EC number: NA
Molecular weight: Translated: 48256; Mature: 48124
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLSDGPPPAEAGRFVTGSILRHVVVMAATGSVGLMAIFVVDLLSLLYVSTLGDPNLTA CCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH AVGFAGIVQFFATAVNIGLMIAAGALVGKAVGARDPAAARRLATSALVLGSLVAAVIAGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IALLAGPLLALIGAEGEALRVAVLFLHITLPSNLLLAAGMLFTGLLRAVGEAGQAMAVTL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH AGAVVTAFLDPLLIFGAGLGVTGAAITVCVARATFVAVGIRGVARHGLLGRPRLPDLPPD HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC AAALAGVAGPAVLTNLAPSVASAFLARLFAGYGADAVAAASVIDRLTPVAFGGLFALSGA HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IGPILAQNWGAGRFDRMRGVLGAAIRVTLAYCAGVWLLLALGREWLAALFGLQGGAAELF HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH GFFCLVGGAIWFFNGLLFLGNAAFNNLGFPLRSTLLNWGRATLGTIPPAMLGAALYGPRG HHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHCCHHHHCCCHHHHHHHHCCCCH VVAGMGIGSLIFGALGILLARRTVDRLEGSGPRRPGADIAAEAPQRAAPLPAGHAHPEPM HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCC T C >Mature Secondary Structure SDLSDGPPPAEAGRFVTGSILRHVVVMAATGSVGLMAIFVVDLLSLLYVSTLGDPNLTA CCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH AVGFAGIVQFFATAVNIGLMIAAGALVGKAVGARDPAAARRLATSALVLGSLVAAVIAGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IALLAGPLLALIGAEGEALRVAVLFLHITLPSNLLLAAGMLFTGLLRAVGEAGQAMAVTL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH AGAVVTAFLDPLLIFGAGLGVTGAAITVCVARATFVAVGIRGVARHGLLGRPRLPDLPPD HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC AAALAGVAGPAVLTNLAPSVASAFLARLFAGYGADAVAAASVIDRLTPVAFGGLFALSGA HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IGPILAQNWGAGRFDRMRGVLGAAIRVTLAYCAGVWLLLALGREWLAALFGLQGGAAELF HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH GFFCLVGGAIWFFNGLLFLGNAAFNNLGFPLRSTLLNWGRATLGTIPPAMLGAALYGPRG HHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHCCHHHHCCCHHHHHHHHCCCCH VVAGMGIGSLIFGALGILLARRTVDRLEGSGPRRPGADIAAEAPQRAAPLPAGHAHPEPM HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCC T C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2377619 [H]