| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yqgE [C]
Identifier: 170750314
GI number: 170750314
Start: 4166999
End: 4167640
Strand: Direct
Name: yqgE [C]
Synonym: Mrad2831_3917
Alternate gene names: 170750314
Gene position: 4166999-4167640 (Clockwise)
Preceding gene: 170750310
Following gene: 170750316
Centisome position: 68.56
GC content: 70.72
Gene sequence:
>642_bases ATGTCGGCAGCGTCGTCGCAGGCCGGGAAGGCCGCGTCGCCGCTCCGGACGGAGCTGTCGGGCCCGCACTTCCTCGACGG GCAGTTCCTCGTGGCCATGCCCGGCATGGCCGACGAGCGCTTCGCCCGCTCGGTGATCTACGTCTGCGCCCATTCCGCCG ACGGGGCCATGGGCATTATCGTCAACAAGGCGGCGACCGACATCAGCATGCCGGACCTCCTGGTCCAGCTCGACGTCGCG CCCGAGGCGGACGCGATTCGCCTGCGCGAGCGGGTCGGCCACATGCCGGTCCTGATGGGCGGCCCGGTGGAGGGGCGGCG CGGCTTCGTGCTCCACAGCGACGATTTCCACATCCAGCAATCGACGCTGATCATCGACGACGGCATCTGCCTGACCGCGA CCGTGGAGATCCTCCGGGCCATCGCCAGCGGGGACGGCCCGGCCAGCGCCGTGCTGGCGCTCGGCTATGCCGGCTGGCAG GCCGGGCAGCTGGAGAGCGAGATCATGGCCAACGGCTGGCTCAACTGCCCGGCCGATCCGGCGCTGATCTTCAACGCCGA CCTCGACGCCAAGTACGACCTCGCCCTGCGGGCCAACGGCATCGACCCGGCGATGCTGTCGATGACCGCCGGCCGGGCCT GA
Upstream 100 bases:
>100_bases TTGGGGGAGGCTGGCTGCGTCCCTATTGCCCGCTGGACAACGGAGGGGCGCGGCGTAGCATGGACGGATGGCGCACCCTC CGCACCGCAGGCCTGATCCC
Downstream 100 bases:
>100_bases CCCGGCCGCGCGCTCCGGCGCCTCGAATCCGCCGCCCCCGGTCGCGCCGCCGCGTCGCGCCGGCGGTCCTGCGCGGGCCG CCTATTCGGGCAGCGCGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MSAASSQAGKAASPLRTELSGPHFLDGQFLVAMPGMADERFARSVIYVCAHSADGAMGIIVNKAATDISMPDLLVQLDVA PEADAIRLRERVGHMPVLMGGPVEGRRGFVLHSDDFHIQQSTLIIDDGICLTATVEILRAIASGDGPASAVLALGYAGWQ AGQLESEIMANGWLNCPADPALIFNADLDAKYDLALRANGIDPAMLSMTAGRA
Sequences:
>Translated_213_residues MSAASSQAGKAASPLRTELSGPHFLDGQFLVAMPGMADERFARSVIYVCAHSADGAMGIIVNKAATDISMPDLLVQLDVA PEADAIRLRERVGHMPVLMGGPVEGRRGFVLHSDDFHIQQSTLIIDDGICLTATVEILRAIASGDGPASAVLALGYAGWQ AGQLESEIMANGWLNCPADPALIFNADLDAKYDLALRANGIDPAMLSMTAGRA >Mature_212_residues SAASSQAGKAASPLRTELSGPHFLDGQFLVAMPGMADERFARSVIYVCAHSADGAMGIIVNKAATDISMPDLLVQLDVAP EADAIRLRERVGHMPVLMGGPVEGRRGFVLHSDDFHIQQSTLIIDDGICLTATVEILRAIASGDGPASAVLALGYAGWQA GQLESEIMANGWLNCPADPALIFNADLDAKYDLALRANGIDPAMLSMTAGRA
Specific function: Unknown
COG id: COG1678
COG function: function code K; Putative transcriptional regulator
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0301 (AlgH) family [H]
Homologues:
Organism=Escherichia coli, GI87082187, Length=191, Percent_Identity=37.17277486911, Blast_Score=142, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003774 [H]
Pfam domain/function: PF02622 DUF179 [H]
EC number: NA
Molecular weight: Translated: 22345; Mature: 22214
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAASSQAGKAASPLRTELSGPHFLDGQFLVAMPGMADERFARSVIYVCAHSADGAMGII CCCCCCCCCCCCCCHHHHCCCCEEECCEEEEECCCCCHHHHHHEEEEEEECCCCCEEEEE VNKAATDISMPDLLVQLDVAPEADAIRLRERVGHMPVLMGGPVEGRRGFVLHSDDFHIQQ EECCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEECCCCCCCCEEEEECCCCEEEE STLIIDDGICLTATVEILRAIASGDGPASAVLALGYAGWQAGQLESEIMANGWLNCPADP EEEEEECCCHHHHHHHHHHHHHCCCCCHHHHEEECCCCCCCCCHHHHHHHCCCCCCCCCC ALIFNADLDAKYDLALRANGIDPAMLSMTAGRA EEEEECCCCCEEEEEEEECCCCHHHHEECCCCC >Mature Secondary Structure SAASSQAGKAASPLRTELSGPHFLDGQFLVAMPGMADERFARSVIYVCAHSADGAMGII CCCCCCCCCCCCCHHHHCCCCEEECCEEEEECCCCCHHHHHHEEEEEEECCCCCEEEEE VNKAATDISMPDLLVQLDVAPEADAIRLRERVGHMPVLMGGPVEGRRGFVLHSDDFHIQQ EECCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEECCCCCCCCEEEEECCCCEEEE STLIIDDGICLTATVEILRAIASGDGPASAVLALGYAGWQAGQLESEIMANGWLNCPADP EEEEEECCCHHHHHHHHHHHHHCCCCCHHHHEEECCCCCCCCCHHHHHHHCCCCCCCCCC ALIFNADLDAKYDLALRANGIDPAMLSMTAGRA EEEEECCCCCEEEEEEEECCCCHHHHEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA