| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170750310
Identifier: 170750310
GI number: 170750310
Start: 4164399
End: 4165148
Strand: Direct
Name: 170750310
Synonym: Mrad2831_3913
Alternate gene names: NA
Gene position: 4164399-4165148 (Clockwise)
Preceding gene: 170750309
Following gene: 170750314
Centisome position: 68.52
GC content: 76.53
Gene sequence:
>750_bases ATGTCCGGCAAGCCCAGCCTCGTCGCCCGCCTGTTCTGGACGGCCGTGATCGGCCTCCCGTTCGGGCTCTGGTACGGCCG GCCGGCGCTCGCCGCGACGGGGCTCGCCCTCGGGCTCGTCCTGCTGCGGCATCTCGGGCGCCCGCGCCGGTTCCGGGCCC GGGTGCGGCGGATCGCCCGGGCCCATGCCGAGACGCTGGCGCTGCGGCGGCGTCAGGAGAGCTACAGCGACCCCTACGGC AACTGGATCGAGGACGGCTGGCTGCGCGAGCGGGCGTACTTCCTCGAGCGGACCGTCCTGCCGCAGCTCGGTCCCCGCTT CGCCGACCTCGCCGAGGCGGAGCACGCGCGGATGCTGGCGATCATCGAGGCCGAGGCGGCCGCCGTCGCGCTCCCGGACG AGGACGAGGCGCCCGGCGACGGGCTCGACTACGAGCGCTACTGCGCCGAGCGCCTGGTCCGGGCCGGCTGGCGCGCGCAC CGGACGCCGGCGAGCGGCGACCAGGGCGCCGACATCGTGGCGGTGCGGGACGGGCTGCGCCTCGTCGTGCAGTGCAAGCG GCTGAGCAAGCCCGTGGGCAACGCCGCCGTTCAGGAAGCCGCCGCGGCGCTGCGCTACTGGGACGGGGACCGGGCCGCCG TGGTGTCGAACGCCGGCTTCACGCCGGCGGCGCGCCGGCTGGCCACGGCCACCGGCGTGCTCCTGCTGCACCACGACGCC CTCGAGGCGATCGACCTCGCGGAGGCGTGA
Upstream 100 bases:
>100_bases CTCTCGTCCGCGTCCGCGTCCACAGCTTTCGGAGCCGGATTAGGCATCGGGCAAGCCGCGCTTGCGAGGGTCCGGGGCCC GTCAGCGCCCCAGAGACCCG
Downstream 100 bases:
>100_bases CGATCCTCAGGCGAGCGGGCCCGGGATGGCGATCTCCGCCTCGCTGAGCAGGCGCGCCTCGTGGCGGCGCACGAACAGCC ACAGGGCCAGGCCGCCGAAC
Product: restriction endonuclease
Products: NA
Alternate protein names: Restriction Endonuclease Family; Restriction Endonuclease Family Protein
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MSGKPSLVARLFWTAVIGLPFGLWYGRPALAATGLALGLVLLRHLGRPRRFRARVRRIARAHAETLALRRRQESYSDPYG NWIEDGWLRERAYFLERTVLPQLGPRFADLAEAEHARMLAIIEAEAAAVALPDEDEAPGDGLDYERYCAERLVRAGWRAH RTPASGDQGADIVAVRDGLRLVVQCKRLSKPVGNAAVQEAAAALRYWDGDRAAVVSNAGFTPAARRLATATGVLLLHHDA LEAIDLAEA
Sequences:
>Translated_249_residues MSGKPSLVARLFWTAVIGLPFGLWYGRPALAATGLALGLVLLRHLGRPRRFRARVRRIARAHAETLALRRRQESYSDPYG NWIEDGWLRERAYFLERTVLPQLGPRFADLAEAEHARMLAIIEAEAAAVALPDEDEAPGDGLDYERYCAERLVRAGWRAH RTPASGDQGADIVAVRDGLRLVVQCKRLSKPVGNAAVQEAAAALRYWDGDRAAVVSNAGFTPAARRLATATGVLLLHHDA LEAIDLAEA >Mature_248_residues SGKPSLVARLFWTAVIGLPFGLWYGRPALAATGLALGLVLLRHLGRPRRFRARVRRIARAHAETLALRRRQESYSDPYGN WIEDGWLRERAYFLERTVLPQLGPRFADLAEAEHARMLAIIEAEAAAVALPDEDEAPGDGLDYERYCAERLVRAGWRAHR TPASGDQGADIVAVRDGLRLVVQCKRLSKPVGNAAVQEAAAALRYWDGDRAAVVSNAGFTPAARRLATATGVLLLHHDAL EAIDLAEA
Specific function: Unknown
COG id: COG1787
COG function: function code V; Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27333; Mature: 27201
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGKPSLVARLFWTAVIGLPFGLWYGRPALAATGLALGLVLLRHLGRPRRFRARVRRIAR CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH AHAETLALRRRQESYSDPYGNWIEDGWLRERAYFLERTVLPQLGPRFADLAEAEHARMLA HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHE IIEAEAAAVALPDEDEAPGDGLDYERYCAERLVRAGWRAHRTPASGDQGADIVAVRDGLR EEECCHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHH LVVQCKRLSKPVGNAAVQEAAAALRYWDGDRAAVVSNAGFTPAARRLATATGVLLLHHDA HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHEEEHHH LEAIDLAEA HHHHHHCCC >Mature Secondary Structure SGKPSLVARLFWTAVIGLPFGLWYGRPALAATGLALGLVLLRHLGRPRRFRARVRRIAR CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH AHAETLALRRRQESYSDPYGNWIEDGWLRERAYFLERTVLPQLGPRFADLAEAEHARMLA HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHE IIEAEAAAVALPDEDEAPGDGLDYERYCAERLVRAGWRAHRTPASGDQGADIVAVRDGLR EEECCHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHH LVVQCKRLSKPVGNAAVQEAAAALRYWDGDRAAVVSNAGFTPAARRLATATGVLLLHHDA HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHEEEHHH LEAIDLAEA HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA