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The map label for this gene is yfdE [H]

Identifier: 170750268

GI number: 170750268

Start: 4120430

End: 4121623

Strand: Reverse

Name: yfdE [H]

Synonym: Mrad2831_3871

Alternate gene names: 170750268

Gene position: 4121623-4120430 (Counterclockwise)

Preceding gene: 170750269

Following gene: 170750267

Centisome position: 67.81

GC content: 70.77

Gene sequence:

>1194_bases
GTGTCCGGTCCGCTCAGCGGTATCCGCGTTCTCGAGCTCGGTCAGCTGATCGCCGCGCCCTTCGCGACGCGGCTGATGGC
CGAGTTCGGCGCCGAGGTGATCAAGGTCGAGGCCCCGGGCGAGGGCGACCCGCTCCGGAAGTGGCGCAAGATGCACGAGG
GCACCTCGCTCTGGTGGTACCTGCAGTCGCGCAACAAGAAGTCGATCGCCGTCAATCTGAAGTCGCCCGAGGGGCTCGAC
ATCGTCAAGCAGCTCGCCGCGAGCGCCGACGTGGTGGTCGAGAACTTCCGTCCCGGCGGCCTGGAGAAGCTCGGCCTCGG
CTGGGACGTGCTCTCCGCCCTCAACCCGAACCTCGTGATGGTCCGGATCTCGGGCTACGGCCAGACCGGCCCCTACCGCG
ACCGGCCCGGCTTCGGGGCCATCGGCGAGTCGATGGGCGGCATCCGCTTCACCACCGGCAGCCCGGATTCCCCGCCGGCC
CGAGTCGGCGTCAGCATCGGCGACACCCTGGCCTCGCTCCACGGCGTCATCGGCGCGCTGATGGCCCTGCTGCGCGTGAA
GACCGGGCAGGGCGCCGGTCAGGTGATCGACGTCTCCCTCGTCGAGAGCGTGTTCAACGTCATGGAGAGCCTCGTCCCGG
AGTACGACCTGCTGGGCGAGGTCCGCACCCGCACCGGCGGCGCCCTGCCGGGCATCACCCCGTCGAACACCTACCCGACG
CGGGACGGCGGCTACGTGGTCATCGCCGGCAACAGCGACCCGATCTTCCGCCGCCTGATGACGGCGATCGGCCGTCCCGA
CCTCGCGGACGACCCGGCCCTGCGCAACAACGAGGGCCGCTCCAAGCAGTCGGCCATGCTGGACGGCACCATCGCCGACT
GGTCGAAGACGAAGAGTGTGGAGGAGGCGCTCGCCGTCCTCGACGCAGCCGACGTGCCCGCCGGCCGCATCTACTCGGTC
GCCGACATCGTGGCCGATCCGCATTATCAGGCGCGCGACATGATCCTGCAGGCGGAGCTGCCCGGCGGGACGGCCGTGAA
GATGCCCGGCATCGTGCCGAAGCTGTCCGACACGCCCGGCGAAGTCCGCTGGCAGGGGCCGGCCCTCGGCGCCCACACCG
ATTCCGTGCTCGCCGAGCTCGGTCTCGACCCGGCGCGCATCGCCGCGCTGCGCGAGAAGGGAGCCGTGGCATGA

Upstream 100 bases:

>100_bases
GCGTGCGTTCTCCGGCGGCGAACGCACGGTGGTGCATGGCGTTTGGACTTGGCCACCGGAAGGGCCCTATCTCCGGGGCA
ACAAACGATGGAGGAAAGCC

Downstream 100 bases:

>100_bases
GCGGCGATGCGCTGATCGTCCAGGAGGTCGCGACCCGGGACGGCTTCCAGATCGAGCCGGTCTTCGTGCCGACCCCGGAG
AAGATCCGCCTGATCGACGC

Product: L-carnitine dehydratase/bile acid-inducible protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MSGPLSGIRVLELGQLIAAPFATRLMAEFGAEVIKVEAPGEGDPLRKWRKMHEGTSLWWYLQSRNKKSIAVNLKSPEGLD
IVKQLAASADVVVENFRPGGLEKLGLGWDVLSALNPNLVMVRISGYGQTGPYRDRPGFGAIGESMGGIRFTTGSPDSPPA
RVGVSIGDTLASLHGVIGALMALLRVKTGQGAGQVIDVSLVESVFNVMESLVPEYDLLGEVRTRTGGALPGITPSNTYPT
RDGGYVVIAGNSDPIFRRLMTAIGRPDLADDPALRNNEGRSKQSAMLDGTIADWSKTKSVEEALAVLDAADVPAGRIYSV
ADIVADPHYQARDMILQAELPGGTAVKMPGIVPKLSDTPGEVRWQGPALGAHTDSVLAELGLDPARIAALREKGAVA

Sequences:

>Translated_397_residues
MSGPLSGIRVLELGQLIAAPFATRLMAEFGAEVIKVEAPGEGDPLRKWRKMHEGTSLWWYLQSRNKKSIAVNLKSPEGLD
IVKQLAASADVVVENFRPGGLEKLGLGWDVLSALNPNLVMVRISGYGQTGPYRDRPGFGAIGESMGGIRFTTGSPDSPPA
RVGVSIGDTLASLHGVIGALMALLRVKTGQGAGQVIDVSLVESVFNVMESLVPEYDLLGEVRTRTGGALPGITPSNTYPT
RDGGYVVIAGNSDPIFRRLMTAIGRPDLADDPALRNNEGRSKQSAMLDGTIADWSKTKSVEEALAVLDAADVPAGRIYSV
ADIVADPHYQARDMILQAELPGGTAVKMPGIVPKLSDTPGEVRWQGPALGAHTDSVLAELGLDPARIAALREKGAVA
>Mature_396_residues
SGPLSGIRVLELGQLIAAPFATRLMAEFGAEVIKVEAPGEGDPLRKWRKMHEGTSLWWYLQSRNKKSIAVNLKSPEGLDI
VKQLAASADVVVENFRPGGLEKLGLGWDVLSALNPNLVMVRISGYGQTGPYRDRPGFGAIGESMGGIRFTTGSPDSPPAR
VGVSIGDTLASLHGVIGALMALLRVKTGQGAGQVIDVSLVESVFNVMESLVPEYDLLGEVRTRTGGALPGITPSNTYPTR
DGGYVVIAGNSDPIFRRLMTAIGRPDLADDPALRNNEGRSKQSAMLDGTIADWSKTKSVEEALAVLDAADVPAGRIYSVA
DIVADPHYQARDMILQAELPGGTAVKMPGIVPKLSDTPGEVRWQGPALGAHTDSVLAELGLDPARIAALREKGAVA

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=395, Percent_Identity=34.1772151898734, Blast_Score=222, Evalue=6e-58,
Organism=Homo sapiens, GI300863124, Length=421, Percent_Identity=32.541567695962, Blast_Score=209, Evalue=3e-54,
Organism=Homo sapiens, GI300863126, Length=396, Percent_Identity=30.050505050505, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI13376042, Length=421, Percent_Identity=28.7410926365796, Blast_Score=155, Evalue=4e-38,
Organism=Homo sapiens, GI266456254, Length=393, Percent_Identity=26.972010178117, Blast_Score=125, Evalue=6e-29,
Organism=Homo sapiens, GI42794625, Length=393, Percent_Identity=26.972010178117, Blast_Score=125, Evalue=9e-29,
Organism=Homo sapiens, GI266458393, Length=259, Percent_Identity=32.046332046332, Blast_Score=106, Evalue=4e-23,
Organism=Homo sapiens, GI266458397, Length=259, Percent_Identity=31.6602316602317, Blast_Score=105, Evalue=5e-23,
Organism=Homo sapiens, GI266458395, Length=128, Percent_Identity=35.9375, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI42822893, Length=128, Percent_Identity=36.71875, Blast_Score=88, Evalue=1e-17,
Organism=Escherichia coli, GI87082093, Length=355, Percent_Identity=34.6478873239437, Blast_Score=218, Evalue=5e-58,
Organism=Escherichia coli, GI1788717, Length=420, Percent_Identity=29.7619047619048, Blast_Score=176, Evalue=3e-45,
Organism=Escherichia coli, GI1786222, Length=402, Percent_Identity=26.6169154228856, Blast_Score=130, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI115535051, Length=325, Percent_Identity=30.1538461538462, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI32564160, Length=320, Percent_Identity=28.75, Blast_Score=94, Evalue=8e-20,
Organism=Drosophila melanogaster, GI24648431, Length=397, Percent_Identity=33.5012594458438, Blast_Score=220, Evalue=1e-57,
Organism=Drosophila melanogaster, GI24585488, Length=366, Percent_Identity=28.1420765027322, Blast_Score=115, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 41946; Mature: 41814

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGPLSGIRVLELGQLIAAPFATRLMAEFGAEVIKVEAPGEGDPLRKWRKMHEGTSLWWY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEE
LQSRNKKSIAVNLKSPEGLDIVKQLAASADVVVENFRPGGLEKLGLGWDVLSALNPNLVM
EECCCCCEEEEEECCCCCHHHHHHHHHHHHHEEECCCCCCCHHHCCCHHHHHHCCCCEEE
VRISGYGQTGPYRDRPGFGAIGESMGGIRFTTGSPDSPPARVGVSIGDTLASLHGVIGAL
EEEECCCCCCCCCCCCCCCCHHHCCCCEEEECCCCCCCCCEEECHHHHHHHHHHHHHHHH
MALLRVKTGQGAGQVIDVSLVESVFNVMESLVPEYDLLGEVRTRTGGALPGITPSNTYPT
HHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
RDGGYVVIAGNSDPIFRRLMTAIGRPDLADDPALRNNEGRSKQSAMLDGTIADWSKTKSV
CCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHH
EEALAVLDAADVPAGRIYSVADIVADPHYQARDMILQAELPGGTAVKMPGIVPKLSDTPG
HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHEEEEEECCCCCEEECCCCCCCCCCCCC
EVRWQGPALGAHTDSVLAELGLDPARIAALREKGAVA
CEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
SGPLSGIRVLELGQLIAAPFATRLMAEFGAEVIKVEAPGEGDPLRKWRKMHEGTSLWWY
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEE
LQSRNKKSIAVNLKSPEGLDIVKQLAASADVVVENFRPGGLEKLGLGWDVLSALNPNLVM
EECCCCCEEEEEECCCCCHHHHHHHHHHHHHEEECCCCCCCHHHCCCHHHHHHCCCCEEE
VRISGYGQTGPYRDRPGFGAIGESMGGIRFTTGSPDSPPARVGVSIGDTLASLHGVIGAL
EEEECCCCCCCCCCCCCCCCHHHCCCCEEEECCCCCCCCCEEECHHHHHHHHHHHHHHHH
MALLRVKTGQGAGQVIDVSLVESVFNVMESLVPEYDLLGEVRTRTGGALPGITPSNTYPT
HHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
RDGGYVVIAGNSDPIFRRLMTAIGRPDLADDPALRNNEGRSKQSAMLDGTIADWSKTKSV
CCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHH
EEALAVLDAADVPAGRIYSVADIVADPHYQARDMILQAELPGGTAVKMPGIVPKLSDTPG
HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHEEEEEECCCCCEEECCCCCCCCCCCCC
EVRWQGPALGAHTDSVLAELGLDPARIAALREKGAVA
CEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]