| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is phnK [H]
Identifier: 170750250
GI number: 170750250
Start: 4102772
End: 4103545
Strand: Reverse
Name: phnK [H]
Synonym: Mrad2831_3852
Alternate gene names: 170750250
Gene position: 4103545-4102772 (Counterclockwise)
Preceding gene: 170750251
Following gene: 170750249
Centisome position: 67.52
GC content: 73.13
Gene sequence:
>774_bases ATGAGCGAATCCCTGCTGCAGGTCCGCGGCCTGACCAAGCGCTACGGCGCCCGCCTCGCCTGCGCCGACGTGTCGTTCGA CCTCGTGCCCGGCGAGGTGCTGGCGATCGTGGGCGAATCCGGGTCCGGCAAGTCGACGCTGCTCTCCCTCATCGCCACCG AGCTGGCGCCCGATTCCGGGACGGTCGCCTACCGGATGCGCGACGGTACGCTGCGCGACCTCGGCACCTTGAGCGAGGCC GGGCGCCGGGCGCTGATGCGCACCGAGTGGGGGTTCGTCCGCCAGGACGCGGCCCAGGGCCTGCGCATGGCGGTCTCGGC CGGCGGCAATGTCGGCGAGCGGTTGATGGGGCTCGGCGAGCGCCACTACGGGCGGATCCGCGCCCAGGCCCTCGACTGGC TCGGCCGGGTCGAGATCGCCGCCGACCGGATCGACGACCCGCCGACGCGCTTCTCCGGCGGCATGCGCCAGCGCCTGCAG ATCGCCCGCAACCTCGTCACCGGGCCCCGCCTGGTGCTGATGGACGAGCCGACCTCCGGCCTCGACGTCTCGGTCCAGGC GCGGCTCCTCGACCTGATCCGCCGGCTCTCGGCCGAGCTGGGGCTCGCGGTGATCATCGTCACCCACGACCTCGCGGTGG CGCGGCTCCTCTCGCACCGGATCATGGTCATGCGCGCCGGCCGGGTGATCGAGACCGGCCTCACCGACCGGGTCCTCGAC GATCCCGAGCACGCCTACACCCAGCTCCTCGTCGCCTCGGTGCTCGCCGCATGA
Upstream 100 bases:
>100_bases AGCCGGCCCACGCCTTCTACGAGAGCCTCGGCTTCGAGCGCTACGGCTACAGCTTCCGCCTCGATCCCCCCTTCCTGCCC GACGCCGCGGAGGCGACCCG
Downstream 100 bases:
>100_bases CCGCGCTCCTGACCTTCGAGAACGTCGCCAAGAGCTTCACCCTGCACCTGCGCGGCGGCGTCGTGCTGCCGGTGGTGGGC GGCGTGAGCCTGTCCGTGGA
Product: phosphonate C-P lyase system protein PhnK
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MSESLLQVRGLTKRYGARLACADVSFDLVPGEVLAIVGESGSGKSTLLSLIATELAPDSGTVAYRMRDGTLRDLGTLSEA GRRALMRTEWGFVRQDAAQGLRMAVSAGGNVGERLMGLGERHYGRIRAQALDWLGRVEIAADRIDDPPTRFSGGMRQRLQ IARNLVTGPRLVLMDEPTSGLDVSVQARLLDLIRRLSAELGLAVIIVTHDLAVARLLSHRIMVMRAGRVIETGLTDRVLD DPEHAYTQLLVASVLAA
Sequences:
>Translated_257_residues MSESLLQVRGLTKRYGARLACADVSFDLVPGEVLAIVGESGSGKSTLLSLIATELAPDSGTVAYRMRDGTLRDLGTLSEA GRRALMRTEWGFVRQDAAQGLRMAVSAGGNVGERLMGLGERHYGRIRAQALDWLGRVEIAADRIDDPPTRFSGGMRQRLQ IARNLVTGPRLVLMDEPTSGLDVSVQARLLDLIRRLSAELGLAVIIVTHDLAVARLLSHRIMVMRAGRVIETGLTDRVLD DPEHAYTQLLVASVLAA >Mature_256_residues SESLLQVRGLTKRYGARLACADVSFDLVPGEVLAIVGESGSGKSTLLSLIATELAPDSGTVAYRMRDGTLRDLGTLSEAG RRALMRTEWGFVRQDAAQGLRMAVSAGGNVGERLMGLGERHYGRIRAQALDWLGRVEIAADRIDDPPTRFSGGMRQRLQI ARNLVTGPRLVLMDEPTSGLDVSVQARLLDLIRRLSAELGLAVIIVTHDLAVARLLSHRIMVMRAGRVIETGLTDRVLDD PEHAYTQLLVASVLAA
Specific function: Part of the binding-protein-dependent transport system for alkylphosphonates. Probably responsible for energy coupling to the transport system [H]
COG id: COG4107
COG function: function code P; ABC-type phosphonate transport system, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI21536376, Length=231, Percent_Identity=25.974025974026, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI171184400, Length=259, Percent_Identity=27.7992277992278, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI9955963, Length=229, Percent_Identity=27.5109170305677, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI31657092, Length=235, Percent_Identity=26.8085106382979, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI47078218, Length=230, Percent_Identity=24.3478260869565, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI45446740, Length=230, Percent_Identity=24.3478260869565, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI21536378, Length=232, Percent_Identity=28.8793103448276, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI27477115, Length=230, Percent_Identity=24.3478260869565, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI148612853, Length=196, Percent_Identity=28.0612244897959, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI42741659, Length=217, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI48994997, Length=255, Percent_Identity=65.0980392156863, Blast_Score=319, Evalue=1e-88, Organism=Escherichia coli, GI1789962, Length=264, Percent_Identity=34.8484848484849, Blast_Score=146, Evalue=2e-36, Organism=Escherichia coli, GI1789963, Length=254, Percent_Identity=36.2204724409449, Blast_Score=141, Evalue=5e-35, Organism=Escherichia coli, GI145693107, Length=273, Percent_Identity=35.8974358974359, Blast_Score=138, Evalue=4e-34, Organism=Escherichia coli, GI1788506, Length=266, Percent_Identity=36.0902255639098, Blast_Score=134, Evalue=6e-33, Organism=Escherichia coli, GI1787500, Length=234, Percent_Identity=35.4700854700855, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI1787758, Length=267, Percent_Identity=33.7078651685393, Blast_Score=125, Evalue=3e-30, Organism=Escherichia coli, GI48994883, Length=263, Percent_Identity=34.6007604562738, Blast_Score=124, Evalue=8e-30, Organism=Escherichia coli, GI87081834, Length=233, Percent_Identity=39.0557939914163, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI1787759, Length=258, Percent_Identity=34.1085271317829, Blast_Score=117, Evalue=6e-28, Organism=Escherichia coli, GI1788225, Length=255, Percent_Identity=32.5490196078431, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1789032, Length=251, Percent_Identity=31.8725099601594, Blast_Score=111, Evalue=5e-26, Organism=Escherichia coli, GI1787547, Length=263, Percent_Identity=31.5589353612167, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1787089, Length=233, Percent_Identity=35.1931330472103, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI87081791, Length=261, Percent_Identity=30.2681992337165, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1789891, Length=238, Percent_Identity=30.2521008403361, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1788761, Length=240, Percent_Identity=32.0833333333333, Blast_Score=103, Evalue=8e-24, Organism=Escherichia coli, GI1790467, Length=231, Percent_Identity=32.9004329004329, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1787370, Length=247, Percent_Identity=30.7692307692308, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI1789864, Length=250, Percent_Identity=27.6, Blast_Score=100, Evalue=7e-23, Organism=Escherichia coli, GI87081709, Length=243, Percent_Identity=28.3950617283951, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1787029, Length=253, Percent_Identity=29.6442687747036, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1786398, Length=255, Percent_Identity=29.0196078431373, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1787548, Length=265, Percent_Identity=29.4339622641509, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1788644, Length=254, Percent_Identity=32.2834645669291, Blast_Score=98, Evalue=4e-22, Organism=Escherichia coli, GI1788165, Length=211, Percent_Identity=32.2274881516588, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1786872, Length=251, Percent_Identity=28.2868525896414, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI1790162, Length=248, Percent_Identity=31.4516129032258, Blast_Score=95, Evalue=6e-21, Organism=Escherichia coli, GI1789672, Length=265, Percent_Identity=29.4339622641509, Blast_Score=94, Evalue=6e-21, Organism=Escherichia coli, GI1787105, Length=207, Percent_Identity=35.7487922705314, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1786563, Length=236, Percent_Identity=32.2033898305085, Blast_Score=91, Evalue=7e-20, Organism=Escherichia coli, GI1789890, Length=233, Percent_Identity=30.9012875536481, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1787712, Length=230, Percent_Identity=30.4347826086957, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1786345, Length=249, Percent_Identity=29.3172690763052, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1790525, Length=245, Percent_Identity=25.7142857142857, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1790739, Length=239, Percent_Identity=32.6359832635983, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1789873, Length=236, Percent_Identity=28.8135593220339, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1788210, Length=243, Percent_Identity=30.0411522633745, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI1788450, Length=242, Percent_Identity=27.2727272727273, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI1786698, Length=210, Percent_Identity=30.4761904761905, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI48995001, Length=228, Percent_Identity=27.6315789473684, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI1786803, Length=245, Percent_Identity=28.5714285714286, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1786319, Length=228, Percent_Identity=26.7543859649123, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1787164, Length=227, Percent_Identity=28.6343612334802, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1789991, Length=232, Percent_Identity=28.448275862069, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1790544, Length=258, Percent_Identity=27.1317829457364, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1786703, Length=186, Percent_Identity=36.5591397849462, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI87082267, Length=254, Percent_Identity=27.5590551181102, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI87081782, Length=258, Percent_Identity=26.7441860465116, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1786253, Length=212, Percent_Identity=31.6037735849057, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1788897, Length=225, Percent_Identity=32, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1790190, Length=215, Percent_Identity=27.4418604651163, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI2367384, Length=236, Percent_Identity=28.3898305084746, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1790534, Length=219, Percent_Identity=31.5068493150685, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI87082268, Length=248, Percent_Identity=27.8225806451613, Blast_Score=74, Evalue=6e-15, Organism=Escherichia coli, GI48994943, Length=239, Percent_Identity=25.9414225941423, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI1789593, Length=242, Percent_Identity=27.2727272727273, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1787792, Length=222, Percent_Identity=27.027027027027, Blast_Score=67, Evalue=8e-13, Organism=Escherichia coli, GI1788053, Length=208, Percent_Identity=30.2884615384615, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1788002, Length=220, Percent_Identity=25.4545454545455, Blast_Score=60, Evalue=1e-10, Organism=Caenorhabditis elegans, GI17565938, Length=233, Percent_Identity=30.0429184549356, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI115533608, Length=235, Percent_Identity=28.936170212766, Blast_Score=88, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17558664, Length=235, Percent_Identity=28.5106382978723, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71996809, Length=239, Percent_Identity=30.9623430962343, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI193211015, Length=239, Percent_Identity=30.9623430962343, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI25146777, Length=230, Percent_Identity=30.4347826086957, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI193202349, Length=225, Percent_Identity=30.2222222222222, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI193211017, Length=239, Percent_Identity=30.9623430962343, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI71992290, Length=230, Percent_Identity=30, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17543740, Length=229, Percent_Identity=25.764192139738, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17533971, Length=247, Percent_Identity=28.7449392712551, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI71984940, Length=220, Percent_Identity=29.0909090909091, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI115534520, Length=240, Percent_Identity=27.5, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17569145, Length=217, Percent_Identity=28.110599078341, Blast_Score=70, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17552010, Length=223, Percent_Identity=29.5964125560538, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17567269, Length=211, Percent_Identity=27.9620853080569, Blast_Score=67, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17569143, Length=220, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI115533592, Length=255, Percent_Identity=26.6666666666667, Blast_Score=64, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6322640, Length=223, Percent_Identity=28.6995515695067, Blast_Score=66, Evalue=5e-12, Organism=Drosophila melanogaster, GI24643674, Length=224, Percent_Identity=28.125, Blast_Score=91, Evalue=9e-19, Organism=Drosophila melanogaster, GI24641565, Length=228, Percent_Identity=31.5789473684211, Blast_Score=81, Evalue=5e-16, Organism=Drosophila melanogaster, GI281363262, Length=254, Percent_Identity=29.1338582677165, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI24653245, Length=254, Percent_Identity=29.1338582677165, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI28574150, Length=232, Percent_Identity=26.2931034482759, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI116007328, Length=232, Percent_Identity=26.2931034482759, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI85726357, Length=220, Percent_Identity=29.5454545454545, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24659289, Length=242, Percent_Identity=28.099173553719, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI161076682, Length=210, Percent_Identity=30.952380952381, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI161076684, Length=210, Percent_Identity=30.952380952381, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24581617, Length=210, Percent_Identity=30.952380952381, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24581615, Length=210, Percent_Identity=30.952380952381, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI28573571, Length=235, Percent_Identity=24.2553191489362, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI28574744, Length=187, Percent_Identity=31.0160427807487, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24582014, Length=231, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24582012, Length=231, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI17136662, Length=235, Percent_Identity=28.936170212766, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI23397593, Length=248, Percent_Identity=29.0322580645161, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI28573573, Length=229, Percent_Identity=24.4541484716157, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI21357907, Length=227, Percent_Identity=25.1101321585903, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR012700 - InterPro: IPR013563 [H]
Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]
EC number: NA
Molecular weight: Translated: 27836; Mature: 27704
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESLLQVRGLTKRYGARLACADVSFDLVPGEVLAIVGESGSGKSTLLSLIATELAPDSG CCCHHHHHHHHHHHHCCEEEEECCCEECCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCC TVAYRMRDGTLRDLGTLSEAGRRALMRTEWGFVRQDAAQGLRMAVSAGGNVGERLMGLGE CEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCH RHYGRIRAQALDWLGRVEIAADRIDDPPTRFSGGMRQRLQIARNLVTGPRLVLMDEPTSG HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCC LDVSVQARLLDLIRRLSAELGLAVIIVTHDLAVARLLSHRIMVMRAGRVIETGLTDRVLD CCHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHCC DPEHAYTQLLVASVLAA CHHHHHHHHHHHHHHCC >Mature Secondary Structure SESLLQVRGLTKRYGARLACADVSFDLVPGEVLAIVGESGSGKSTLLSLIATELAPDSG CCHHHHHHHHHHHHCCEEEEECCCEECCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCC TVAYRMRDGTLRDLGTLSEAGRRALMRTEWGFVRQDAAQGLRMAVSAGGNVGERLMGLGE CEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCH RHYGRIRAQALDWLGRVEIAADRIDDPPTRFSGGMRQRLQIARNLVTGPRLVLMDEPTSG HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCC LDVSVQARLLDLIRRLSAELGLAVIIVTHDLAVARLLSHRIMVMRAGRVIETGLTDRVLD CCHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHCC DPEHAYTQLLVASVLAA CHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]