| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
Click here to switch to the map view.
The map label for this gene is phnL [H]
Identifier: 170750249
GI number: 170750249
Start: 4102068
End: 4102775
Strand: Reverse
Name: phnL [H]
Synonym: Mrad2831_3851
Alternate gene names: 170750249
Gene position: 4102775-4102068 (Counterclockwise)
Preceding gene: 170750250
Following gene: 170750248
Centisome position: 67.5
GC content: 74.58
Gene sequence:
>708_bases ATGACCGCGCTCCTGACCTTCGAGAACGTCGCCAAGAGCTTCACCCTGCACCTGCGCGGCGGCGTCGTGCTGCCGGTGGT GGGCGGCGTGAGCCTGTCCGTGGAACCCGGCGAGTGCGTGGTGCTCGGCGGCCCGTCCGGCGCGGGGAAATCCTCGCTGC TGAAGATGGCCTACGGCAATTACCGCTGCGACGGCGGCGCGATCCTCGTCCGCGACGGCGCGACGGTCGTGGACGTCGTC CGCGCCGATCCGCGGGCGGTCCTGGCGCTGCGGGCGCGGGTCATCGCCTACGTGTCGCAGTTCCTGCGGGTGATCCCGCG GGTCCCGGCCCTCGACGTCGTCGAGGCTGCCGGCCGCGAGGGCGGATTGTCCGAGGAGGCGGCGCGCGCGCGGGCCGAGA CCCTGCTCGCCCGGCTCAACCTGCCCGAGCGGCTCTGGGGCCTGCCGCCCGCGACCTTCTCGGGCGGCGAGCAGCAGCGG GTCAACATCGCCCGGGGCCTGATCGCCGACCGGCCGCTCCTGCTCCTCGACGAGCCCACCGCCTCCCTGGACGCGGAGAA CCGCGCCGTCGTGGCCGAGCTCGTCCGCGAGAAGCTCCGGGCGGGGGCCGGCGTGCTCGGCATCTTCCACGACAGCGAGA TGCGCGACGCTGTGGCGACCCGGGTGGTCGATGTCACCCGCTTCGCGCCGCGCGCCCGGGCAGCCTGA
Upstream 100 bases:
>100_bases TGCGCGCCGGCCGGGTGATCGAGACCGGCCTCACCGACCGGGTCCTCGACGATCCCGAGCACGCCTACACCCAGCTCCTC GTCGCCTCGGTGCTCGCCGC
Downstream 100 bases:
>100_bases GGATCTTCACGATGGACGACTTCATCCTCGAGAACGCGACCCTGGTCCTGCCGGACCGGGTGCAGCGCGGCTGGCTCGCC GTGTCGGACGGGGCGATCGC
Product: phosphonate C-P lyase system protein PhnL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MTALLTFENVAKSFTLHLRGGVVLPVVGGVSLSVEPGECVVLGGPSGAGKSSLLKMAYGNYRCDGGAILVRDGATVVDVV RADPRAVLALRARVIAYVSQFLRVIPRVPALDVVEAAGREGGLSEEAARARAETLLARLNLPERLWGLPPATFSGGEQQR VNIARGLIADRPLLLLDEPTASLDAENRAVVAELVREKLRAGAGVLGIFHDSEMRDAVATRVVDVTRFAPRARAA
Sequences:
>Translated_235_residues MTALLTFENVAKSFTLHLRGGVVLPVVGGVSLSVEPGECVVLGGPSGAGKSSLLKMAYGNYRCDGGAILVRDGATVVDVV RADPRAVLALRARVIAYVSQFLRVIPRVPALDVVEAAGREGGLSEEAARARAETLLARLNLPERLWGLPPATFSGGEQQR VNIARGLIADRPLLLLDEPTASLDAENRAVVAELVREKLRAGAGVLGIFHDSEMRDAVATRVVDVTRFAPRARAA >Mature_234_residues TALLTFENVAKSFTLHLRGGVVLPVVGGVSLSVEPGECVVLGGPSGAGKSSLLKMAYGNYRCDGGAILVRDGATVVDVVR ADPRAVLALRARVIAYVSQFLRVIPRVPALDVVEAAGREGGLSEEAARARAETLLARLNLPERLWGLPPATFSGGEQQRV NIARGLIADRPLLLLDEPTASLDAENRAVVAELVREKLRAGAGVLGIFHDSEMRDAVATRVVDVTRFAPRARAA
Specific function: Part of the binding-protein-dependent transport system for alkylphosphonates. Probably responsible for energy coupling to the transport system [H]
COG id: COG4778
COG function: function code P; ABC-type phosphonate transport system, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI9955968, Length=219, Percent_Identity=34.703196347032, Blast_Score=81, Evalue=7e-16, Organism=Homo sapiens, GI9955966, Length=209, Percent_Identity=34.9282296650718, Blast_Score=81, Evalue=8e-16, Organism=Homo sapiens, GI45243524, Length=209, Percent_Identity=34.9282296650718, Blast_Score=81, Evalue=8e-16, Organism=Homo sapiens, GI47078218, Length=219, Percent_Identity=25.5707762557078, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI45446740, Length=219, Percent_Identity=25.5707762557078, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI9955963, Length=175, Percent_Identity=36.5714285714286, Blast_Score=71, Evalue=7e-13, Organism=Homo sapiens, GI105990541, Length=217, Percent_Identity=26.7281105990783, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI156105685, Length=213, Percent_Identity=32.8638497652582, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI42741659, Length=203, Percent_Identity=30.5418719211823, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI9961250, Length=211, Percent_Identity=32.7014218009479, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI31657092, Length=228, Percent_Identity=27.6315789473684, Blast_Score=68, Evalue=5e-12, Organism=Homo sapiens, GI4505771, Length=203, Percent_Identity=30.5418719211823, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI9961252, Length=203, Percent_Identity=30.5418719211823, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI171184400, Length=227, Percent_Identity=33.0396475770925, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI255708477, Length=222, Percent_Identity=29.2792792792793, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI21536376, Length=199, Percent_Identity=25.6281407035176, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1790534, Length=219, Percent_Identity=55.2511415525114, Blast_Score=239, Evalue=8e-65, Organism=Escherichia coli, GI1787029, Length=226, Percent_Identity=31.858407079646, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1787105, Length=232, Percent_Identity=31.8965517241379, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1787089, Length=195, Percent_Identity=36.9230769230769, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1786703, Length=203, Percent_Identity=34.9753694581281, Blast_Score=84, Evalue=6e-18, Organism=Escherichia coli, GI1789672, Length=230, Percent_Identity=30.8695652173913, Blast_Score=84, Evalue=6e-18, Organism=Escherichia coli, GI1788225, Length=219, Percent_Identity=31.0502283105023, Blast_Score=84, Evalue=6e-18, Organism=Escherichia coli, GI1788644, Length=225, Percent_Identity=34.6666666666667, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI87081834, Length=212, Percent_Identity=32.5471698113208, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1789873, Length=208, Percent_Identity=34.1346153846154, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1787712, Length=225, Percent_Identity=32, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1789962, Length=200, Percent_Identity=29, Blast_Score=78, Evalue=4e-16, Organism=Escherichia coli, GI1788165, Length=216, Percent_Identity=31.9444444444444, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1786872, Length=222, Percent_Identity=34.6846846846847, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1790190, Length=217, Percent_Identity=29.9539170506912, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788761, Length=222, Percent_Identity=31.981981981982, Blast_Score=73, Evalue=1e-14, Organism=Escherichia coli, GI87081791, Length=229, Percent_Identity=31.0043668122271, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1788450, Length=209, Percent_Identity=31.1004784688995, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1789593, Length=227, Percent_Identity=32.15859030837, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1788506, Length=206, Percent_Identity=29.6116504854369, Blast_Score=71, Evalue=5e-14, Organism=Escherichia coli, GI1787143, Length=207, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1790467, Length=222, Percent_Identity=29.2792792792793, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1789864, Length=235, Percent_Identity=28.5106382978723, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1787758, Length=170, Percent_Identity=31.1764705882353, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1789751, Length=225, Percent_Identity=27.5555555555556, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1787112, Length=172, Percent_Identity=33.7209302325581, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI87081709, Length=203, Percent_Identity=29.064039408867, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1789032, Length=186, Percent_Identity=31.1827956989247, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1789991, Length=222, Percent_Identity=27.9279279279279, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1786253, Length=199, Percent_Identity=31.6582914572864, Blast_Score=68, Evalue=4e-13, Organism=Escherichia coli, GI87082267, Length=199, Percent_Identity=30.1507537688442, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI145693107, Length=201, Percent_Identity=32.3383084577114, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1789891, Length=200, Percent_Identity=30.5, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1787500, Length=214, Percent_Identity=27.5700934579439, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI2367384, Length=236, Percent_Identity=28.8135593220339, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1786398, Length=222, Percent_Identity=27.027027027027, Blast_Score=64, Evalue=9e-12, Organism=Escherichia coli, GI1786319, Length=213, Percent_Identity=28.6384976525822, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI48995001, Length=203, Percent_Identity=29.5566502463054, Blast_Score=63, Evalue=1e-11, Organism=Escherichia coli, GI1787759, Length=208, Percent_Identity=31.7307692307692, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1787370, Length=199, Percent_Identity=28.1407035175879, Blast_Score=62, Evalue=2e-11, Organism=Escherichia coli, GI1788897, Length=207, Percent_Identity=28.5024154589372, Blast_Score=62, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17558664, Length=214, Percent_Identity=31.3084112149533, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71992290, Length=189, Percent_Identity=33.8624338624339, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17541710, Length=194, Percent_Identity=32.4742268041237, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17565938, Length=205, Percent_Identity=30.7317073170732, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17543740, Length=169, Percent_Identity=31.9526627218935, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17567265, Length=202, Percent_Identity=29.2079207920792, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI115533608, Length=224, Percent_Identity=24.5535714285714, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71984940, Length=172, Percent_Identity=33.7209302325581, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI115533592, Length=227, Percent_Identity=32.15859030837, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17567269, Length=209, Percent_Identity=30.1435406698565, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71996550, Length=188, Percent_Identity=29.7872340425532, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI115535101, Length=209, Percent_Identity=30.1435406698565, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6323217, Length=221, Percent_Identity=28.5067873303167, Blast_Score=70, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6324498, Length=219, Percent_Identity=30.5936073059361, Blast_Score=66, Evalue=5e-12, Organism=Drosophila melanogaster, GI85726357, Length=175, Percent_Identity=31.4285714285714, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24582014, Length=180, Percent_Identity=27.7777777777778, Blast_Score=64, Evalue=8e-11, Organism=Drosophila melanogaster, GI24582012, Length=180, Percent_Identity=27.7777777777778, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR012701 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 24836; Mature: 24705
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALLTFENVAKSFTLHLRGGVVLPVVGGVSLSVEPGECVVLGGPSGAGKSSLLKMAYGN CCEEEEHHHHHHHEEEEECCCEEEEEECCEEEEECCCCEEEEECCCCCCHHHHHHHHCCC YRCDGGAILVRDGATVVDVVRADPRAVLALRARVIAYVSQFLRVIPRVPALDVVEAAGRE EEECCCEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCC GGLSEEAARARAETLLARLNLPERLWGLPPATFSGGEQQRVNIARGLIADRPLLLLDEPT CCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCC ASLDAENRAVVAELVREKLRAGAGVLGIFHDSEMRDAVATRVVDVTRFAPRARAA CCCCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TALLTFENVAKSFTLHLRGGVVLPVVGGVSLSVEPGECVVLGGPSGAGKSSLLKMAYGN CEEEEHHHHHHHEEEEECCCEEEEEECCEEEEECCCCEEEEECCCCCCHHHHHHHHCCC YRCDGGAILVRDGATVVDVVRADPRAVLALRARVIAYVSQFLRVIPRVPALDVVEAAGRE EEECCCEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCC GGLSEEAARARAETLLARLNLPERLWGLPPATFSGGEQQRVNIARGLIADRPLLLLDEPT CCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCC ASLDAENRAVVAELVREKLRAGAGVLGIFHDSEMRDAVATRVVDVTRFAPRARAA CCCCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]