| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170750240
Identifier: 170750240
GI number: 170750240
Start: 4093224
End: 4094867
Strand: Reverse
Name: 170750240
Synonym: Mrad2831_3842
Alternate gene names: NA
Gene position: 4094867-4093224 (Counterclockwise)
Preceding gene: 170750241
Following gene: 170750239
Centisome position: 67.37
GC content: 68.07
Gene sequence:
>1644_bases ATGCGATGCACCCTGACGGTCACCTCCAAGCGACGCATCCTGTGCGTCTTTCCCGCCTACACGCCGTCCTTCGGGACATT CTCCCACGCCTACCCGCTGATGGGCGGGGTGAAGGCGTTCATGCCGCCGCAGGGGCTGCTGCTGATCGCGGCCTACATGC CCGAGGCGTGGGAATGTCGGTTCATCGATGAGAATATCCGCCGCGCCGGCCCGGCCGACTTCGCCTGGGCCGACGCGGTC TTCGTCTCCGGGATGCACATCCAGGAGCCGCAGATCCACGACATCCGCGACCGCGCCCGCGCCGCCGGCAAGGTCACGGT GCTGGGCGGCCCCTCGGTCTCGGGCGCCCCGGAGAAGTACGGCGACTTCGACTACCTCCATATAGGCGAGATCGGCGACG CCACCGACCAGCTCGTCGCGCGCCTCGACGGCGACGTCACCCCGCCGCCCGACCAGGTGGTGCTGGAGACGAAGGACCGC CTCGCGCTCGCCGACTTCCCGGCCCCGGCCTACGAGCACGCGCCGCTCAAGCGCTACCTGATCGGCTCGCTGCAGTTCTC CTCGGGCTGCCCCTACCGCTGCGAGTTCTGCGACATCCCGCAGCTCTACGGCCGCCAGCCCCGCCTGAAGAGTCCCGAGC AGATGTGCGCCGAGCTCGACGCCATCGTCAGCCAGCCGGGCCATCCGGCGGTGGTCTACTTCGTCGACGACAATTTCATC GGCAACCGCAAGGCGACGCGCGAGATGCTGCCGCACCTCGTCGCGTGGCAGAAGAAGAACAACTACCCGCTCCAGTTCGC CTGCGAGGCGACGCTGAACATGGCCAAGCAGCCCGAGATCCTCGAGCTGATGCGGCAGGCCAACTTCATGACGGTGTTCG TCGGCATCGAGACGCCGGAGGCGGAGGCGCTCAAGGGCATCGACAAGACCCACAACGCCGCCGTGCCGATGTACGAGGCG ATCGAGACCCTCAATTCCTACGGCCTGGAGGTGACCTCCGGCATCATCCTCGGTCTCGACTCCGACACCGACAAGTCCGA GCAGAACCTGATCGACTTCATCGACCGCTCGGCCATCCCGGTCCTGACCATCAACCTGCTCCAGGCGCTGCCCAAGACCC CGCTCTGGGACCGGCTGGAGCGCGAGGGCCGGCTGCTGCACGACGCCAGCCTCGAGTCGAACGTGCTGTTCAAGCGGCCC CACGATTCGGTGGTGTCGAGCTGGCGCCGGGCGATCGCGCACGCCTACGAGCCCGAGAAGATCTTCGAGCGGTTCAAGCA CCAGTGCGCGGTGACCTACCCGAACCGGATCACCACGCCGACGGCCGGCAAGCTGACCTTCACCAACCTGCGCCGCGGCC TGATCCTGGGCTTCAACATCATCACCCGGGTCGGGATCTTCTCCGACTACCGCAAGCCGTTCTGGAGCGCGGCCGGCTAC GCGCTGAAGCGCGGGCAGATCGAGGCGGTGTTCAACATGGGCTTCGTGGCCCACCACCTGATCCGCTTCACCCGCGAGGC CCTGCGCGGCGAGCACAACGCCTCGTTCTACGCCGCGAAGGCCGCGGAGGCGAAGGCCGCCCGCGACCGGAGCTGGTGGG AGGCGGCGCGGCGCAAGCTCGTGCCGGAGCGCGAGGCGGCGTAG
Upstream 100 bases:
>100_bases AGACAAGCCGCGGTGGCCGCCACCGGGCCCGCGCTCCTCACGCCATTCTTAACCGCCGAGGGGGGGCGCCAACGGCCGCG GCTGTGCTAGATAGGGCGCC
Downstream 100 bases:
>100_bases CCCGGGTCCCGGGCCCGTCGGAGCGATGCAGCCGCGGCAGGGCTCCCGAGCAAGTCCTTGCCTGCGGCGGAAAAGTCGCG TTCCGGCCCTTGGCAGGCGG
Product: radical SAM domain-containing protein
Products: NA
Alternate protein names: ORF N [H]
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MRCTLTVTSKRRILCVFPAYTPSFGTFSHAYPLMGGVKAFMPPQGLLLIAAYMPEAWECRFIDENIRRAGPADFAWADAV FVSGMHIQEPQIHDIRDRARAAGKVTVLGGPSVSGAPEKYGDFDYLHIGEIGDATDQLVARLDGDVTPPPDQVVLETKDR LALADFPAPAYEHAPLKRYLIGSLQFSSGCPYRCEFCDIPQLYGRQPRLKSPEQMCAELDAIVSQPGHPAVVYFVDDNFI GNRKATREMLPHLVAWQKKNNYPLQFACEATLNMAKQPEILELMRQANFMTVFVGIETPEAEALKGIDKTHNAAVPMYEA IETLNSYGLEVTSGIILGLDSDTDKSEQNLIDFIDRSAIPVLTINLLQALPKTPLWDRLEREGRLLHDASLESNVLFKRP HDSVVSSWRRAIAHAYEPEKIFERFKHQCAVTYPNRITTPTAGKLTFTNLRRGLILGFNIITRVGIFSDYRKPFWSAAGY ALKRGQIEAVFNMGFVAHHLIRFTREALRGEHNASFYAAKAAEAKAARDRSWWEAARRKLVPEREAA
Sequences:
>Translated_547_residues MRCTLTVTSKRRILCVFPAYTPSFGTFSHAYPLMGGVKAFMPPQGLLLIAAYMPEAWECRFIDENIRRAGPADFAWADAV FVSGMHIQEPQIHDIRDRARAAGKVTVLGGPSVSGAPEKYGDFDYLHIGEIGDATDQLVARLDGDVTPPPDQVVLETKDR LALADFPAPAYEHAPLKRYLIGSLQFSSGCPYRCEFCDIPQLYGRQPRLKSPEQMCAELDAIVSQPGHPAVVYFVDDNFI GNRKATREMLPHLVAWQKKNNYPLQFACEATLNMAKQPEILELMRQANFMTVFVGIETPEAEALKGIDKTHNAAVPMYEA IETLNSYGLEVTSGIILGLDSDTDKSEQNLIDFIDRSAIPVLTINLLQALPKTPLWDRLEREGRLLHDASLESNVLFKRP HDSVVSSWRRAIAHAYEPEKIFERFKHQCAVTYPNRITTPTAGKLTFTNLRRGLILGFNIITRVGIFSDYRKPFWSAAGY ALKRGQIEAVFNMGFVAHHLIRFTREALRGEHNASFYAAKAAEAKAARDRSWWEAARRKLVPEREAA >Mature_547_residues MRCTLTVTSKRRILCVFPAYTPSFGTFSHAYPLMGGVKAFMPPQGLLLIAAYMPEAWECRFIDENIRRAGPADFAWADAV FVSGMHIQEPQIHDIRDRARAAGKVTVLGGPSVSGAPEKYGDFDYLHIGEIGDATDQLVARLDGDVTPPPDQVVLETKDR LALADFPAPAYEHAPLKRYLIGSLQFSSGCPYRCEFCDIPQLYGRQPRLKSPEQMCAELDAIVSQPGHPAVVYFVDDNFI GNRKATREMLPHLVAWQKKNNYPLQFACEATLNMAKQPEILELMRQANFMTVFVGIETPEAEALKGIDKTHNAAVPMYEA IETLNSYGLEVTSGIILGLDSDTDKSEQNLIDFIDRSAIPVLTINLLQALPKTPLWDRLEREGRLLHDASLESNVLFKRP HDSVVSSWRRAIAHAYEPEKIFERFKHQCAVTYPNRITTPTAGKLTFTNLRRGLILGFNIITRVGIFSDYRKPFWSAAGY ALKRGQIEAVFNMGFVAHHLIRFTREALRGEHNASFYAAKAAEAKAARDRSWWEAARRKLVPEREAA
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006158 - InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 61385; Mature: 61385
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCTLTVTSKRRILCVFPAYTPSFGTFSHAYPLMGGVKAFMPPQGLLLIAAYMPEAWECR CEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHCCHHHCCCCCCEEEEEECCCCCCEEE FIDENIRRAGPADFAWADAVFVSGMHIQEPQIHDIRDRARAAGKVTVLGGPSVSGAPEKY ECCHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCHHC GDFDYLHIGEIGDATDQLVARLDGDVTPPPDQVVLETKDRLALADFPAPAYEHAPLKRYL CCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCHHHHH IGSLQFSSGCPYRCEFCDIPQLYGRQPRLKSPEQMCAELDAIVSQPGHPAVVYFVDDNFI HHCEEECCCCCCEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCC GNRKATREMLPHLVAWQKKNNYPLQFACEATLNMAKQPEILELMRQANFMTVFVGIETPE CCHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCHHHHHHHHCCEEEEEEEECCCH AEALKGIDKTHNAAVPMYEAIETLNSYGLEVTSGIILGLDSDTDKSEQNLIDFIDRSAIP HHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEECCEEEEECCCCCCHHHHHHHHHHCCCCH VLTINLLQALPKTPLWDRLEREGRLLHDASLESNVLFKRPHDSVVSSWRRAIAHAYEPEK HHHHHHHHHCCCCCCHHHHHHCCCEEECCCCCCCEEEECCCHHHHHHHHHHHHHCCCHHH IFERFKHQCAVTYPNRITTPTAGKLTFTNLRRGLILGFNIITRVGIFSDYRKPFWSAAGY HHHHHHHCEEEECCCCCCCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ALKRGQIEAVFNMGFVAHHLIRFTREALRGEHNASFYAAKAAEAKAARDRSWWEAARRKL HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCHHHHHHHHHCC VPEREAA CCCCCCC >Mature Secondary Structure MRCTLTVTSKRRILCVFPAYTPSFGTFSHAYPLMGGVKAFMPPQGLLLIAAYMPEAWECR CEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHCCHHHCCCCCCEEEEEECCCCCCEEE FIDENIRRAGPADFAWADAVFVSGMHIQEPQIHDIRDRARAAGKVTVLGGPSVSGAPEKY ECCHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCHHC GDFDYLHIGEIGDATDQLVARLDGDVTPPPDQVVLETKDRLALADFPAPAYEHAPLKRYL CCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCHHHHH IGSLQFSSGCPYRCEFCDIPQLYGRQPRLKSPEQMCAELDAIVSQPGHPAVVYFVDDNFI HHCEEECCCCCCEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCC GNRKATREMLPHLVAWQKKNNYPLQFACEATLNMAKQPEILELMRQANFMTVFVGIETPE CCHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCHHHHHHHHCCEEEEEEEECCCH AEALKGIDKTHNAAVPMYEAIETLNSYGLEVTSGIILGLDSDTDKSEQNLIDFIDRSAIP HHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEECCEEEEECCCCCCHHHHHHHHHHCCCCH VLTINLLQALPKTPLWDRLEREGRLLHDASLESNVLFKRPHDSVVSSWRRAIAHAYEPEK HHHHHHHHHCCCCCCHHHHHHCCCEEECCCCCCCEEEECCCHHHHHHHHHHHHHCCCHHH IFERFKHQCAVTYPNRITTPTAGKLTFTNLRRGLILGFNIITRVGIFSDYRKPFWSAAGY HHHHHHHCEEEECCCCCCCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ALKRGQIEAVFNMGFVAHHLIRFTREALRGEHNASFYAAKAAEAKAARDRSWWEAARRKL HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCHHHHHHHHHCC VPEREAA CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231; 8467083 [H]