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The map label for this gene is yqxC [H]

Identifier: 170750218

GI number: 170750218

Start: 4063990

End: 4064781

Strand: Direct

Name: yqxC [H]

Synonym: Mrad2831_3820

Alternate gene names: 170750218

Gene position: 4063990-4064781 (Clockwise)

Preceding gene: 170750216

Following gene: 170750219

Centisome position: 66.87

GC content: 77.02

Gene sequence:

>792_bases
ATGACCCGAGACCGGACCAGCCCGGACCGCGCGGCCCCCGCGGACGACCCCGCGGACGACCCTGGTCCGCGACGCGCCGA
CCTGTACCTCGTGGCGCACGGCCATTTCGAGAGCCGGGCCCGCGCCCAGGCGGCGATCCGTGCCGGACTCGTGCGGGTCG
ACGGGCGGCCGCTCGCGCGCCCCTCGGACTCGATCGCCCCCGGGGCCCGGGTCGAGGCGGAACCCGAGCATCCCTACGCC
TCCCGCGGCGGCCTCAAGCTCGCCGCCGCGCTGGACGCGTTCGGCGTCGATCCGGCCGGCCGGGTCGCCCTCGACGTCGG
CGCCTCGACGGGCGGCTTCACCGACGTGCTGCTCGCCCGCGGCGCGCGCCACGTCCACGCCCTCGACGTGGGCCGGGGCC
AGCTCCATCCGCGCCTCGCCGGGGACCCGCGCGTGACCAACCGCGAGGGCACCGACATTCGCGGCCTCGGCGCGGACACC
CTCGTCCCGCCGCCCGACCTCGCGAGCGTGGACGTGAGCTTCATCGGCCTGCGCCTCGTGCTGCCGGTCCTCCCGGGCCT
GCTGAGGCCGGCATCGGCGATCGTCGCGCTGATCAAGCCGCAATTCGAGGCCGGCCGCGCCCGGGTCGGCCGCGGCGGCC
TCGTGCGCGACCCGGCAGTCCACGCGGAGGTCTGCGCGGCCGTCCGCGAAACCCTGGAGGGGCTCGGGGCCACGATCCTG
GGCCTGATCGACTCGCCGGTGCCGGGCGGCGACGGCAATGCCGAGTTCCTGATCGGTGCGAGGTTCCCGTGA

Upstream 100 bases:

>100_bases
CTCCTTTCCGGCCCGGTCTAGTTAGGGAGCGCGCCGGCCTTCGACAGGGCGGCGGCCCGAAACCTCCGCCGCAGACCTGC
CGGAACCGCACGAAGCCCCG

Downstream 100 bases:

>100_bases
GCGAGCCAGCGAATAGCGAGACGGTCACGATCCGGGCGCTCGGCGCCCGCGGCGACGGGATCGCCGAGGACGGGACTCTG
GTACCCTACACGCTGCCCGG

Product: hemolysin A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MTRDRTSPDRAAPADDPADDPGPRRADLYLVAHGHFESRARAQAAIRAGLVRVDGRPLARPSDSIAPGARVEAEPEHPYA
SRGGLKLAAALDAFGVDPAGRVALDVGASTGGFTDVLLARGARHVHALDVGRGQLHPRLAGDPRVTNREGTDIRGLGADT
LVPPPDLASVDVSFIGLRLVLPVLPGLLRPASAIVALIKPQFEAGRARVGRGGLVRDPAVHAEVCAAVRETLEGLGATIL
GLIDSPVPGGDGNAEFLIGARFP

Sequences:

>Translated_263_residues
MTRDRTSPDRAAPADDPADDPGPRRADLYLVAHGHFESRARAQAAIRAGLVRVDGRPLARPSDSIAPGARVEAEPEHPYA
SRGGLKLAAALDAFGVDPAGRVALDVGASTGGFTDVLLARGARHVHALDVGRGQLHPRLAGDPRVTNREGTDIRGLGADT
LVPPPDLASVDVSFIGLRLVLPVLPGLLRPASAIVALIKPQFEAGRARVGRGGLVRDPAVHAEVCAAVRETLEGLGATIL
GLIDSPVPGGDGNAEFLIGARFP
>Mature_262_residues
TRDRTSPDRAAPADDPADDPGPRRADLYLVAHGHFESRARAQAAIRAGLVRVDGRPLARPSDSIAPGARVEAEPEHPYAS
RGGLKLAAALDAFGVDPAGRVALDVGASTGGFTDVLLARGARHVHALDVGRGQLHPRLAGDPRVTNREGTDIRGLGADTL
VPPPDLASVDVSFIGLRLVLPVLPGLLRPASAIVALIKPQFEAGRARVGRGGLVRDPAVHAEVCAAVRETLEGLGATILG
LIDSPVPGGDGNAEFLIGARFP

Specific function: Unknown

COG id: COG1189

COG function: function code J; Predicted rRNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004538
- InterPro:   IPR002877
- InterPro:   IPR002942 [H]

Pfam domain/function: PF01728 FtsJ; PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 27222; Mature: 27091

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRDRTSPDRAAPADDPADDPGPRRADLYLVAHGHFESRARAQAAIRAGLVRVDGRPLAR
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCEEEECCCCCCC
PSDSIAPGARVEAEPEHPYASRGGLKLAAALDAFGVDPAGRVALDVGASTGGFTDVLLAR
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCCCCEEEEECCCCCCHHHHHHHC
GARHVHALDVGRGQLHPRLAGDPRVTNREGTDIRGLGADTLVPPPDLASVDVSFIGLRLV
CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHH
LPVLPGLLRPASAIVALIKPQFEAGRARVGRGGLVRDPAVHAEVCAAVRETLEGLGATIL
HHHHHHHHCHHHHHHHHHCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GLIDSPVPGGDGNAEFLIGARFP
HHHCCCCCCCCCCCEEEEEECCC
>Mature Secondary Structure 
TRDRTSPDRAAPADDPADDPGPRRADLYLVAHGHFESRARAQAAIRAGLVRVDGRPLAR
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCEEEECCCCCCC
PSDSIAPGARVEAEPEHPYASRGGLKLAAALDAFGVDPAGRVALDVGASTGGFTDVLLAR
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCCCCEEEEECCCCCCHHHHHHHC
GARHVHALDVGRGQLHPRLAGDPRVTNREGTDIRGLGADTLVPPPDLASVDVSFIGLRLV
CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHH
LPVLPGLLRPASAIVALIKPQFEAGRARVGRGGLVRDPAVHAEVCAAVRETLEGLGATIL
HHHHHHHHCHHHHHHHHHCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GLIDSPVPGGDGNAEFLIGARFP
HHHCCCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 2507400 [H]