| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is bphB [H]
Identifier: 170750121
GI number: 170750121
Start: 3960471
End: 3963086
Strand: Reverse
Name: bphB [H]
Synonym: Mrad2831_3723
Alternate gene names: 170750121
Gene position: 3963086-3960471 (Counterclockwise)
Preceding gene: 170750122
Following gene: 170750120
Centisome position: 65.21
GC content: 72.21
Gene sequence:
>2616_bases ATGCCGCCCAGTCAGATCCCCGATACGGACGTCGATCTCGACGCCATCGCGCCGGAGGCGCTCGACCGCCTGGACCAGGG GGTGATCGGCCTCGACCCGGCCGGCACCGTCGTGGCCTTCAGCGAGGGCGCGAGCGCGATCTCCGGGCTGTCGCGCGAGG CCGTCCTCGGGCGCGACTATTTCCGCGACGTGATGCCCGGCACGAACGTGCCGAGCTTCCGCGGCCGGTTCCTGGCGGGC GCGCGCCGCGGTGCCCTCGACGAGACCTTCGACTACGTCTTCGGCCGGCTGCCGCAGCCGCTCCGGGCCCGGATCCACAT GCGTCACGGCCAGATCGGCGGCCTGCGCCCCGTGACGTGGCTGACCATCGATCCCGTCGAGAGCCTCGGGGCCGACCTGT CGCGCGAGGCGGTCCTGGCGGCGATCGGCCAGCGGGTGCGCGCCGAGCCCGTGGATGCCAGCATCTGCGAGCGCGAGCCG ATCCACATTCCGGGCTCGATCCAGCCCAACGCCGTGATGCTCGCGGCCGATGCCGGAACTCTCCTGGTCGCGGCCTACTC GGCCAATGTCGGCGAGATCATCGACCCGATCGAGCCGCCACTGGCGGGCCGGCCCCTGGCGGACGTGCTGCCGGCGGAGT TCGTCGCGGCGATCCGCGCCCGGCTCGCGAGCGGGACCCTCGACGACGGCGCCTCCATGCGCCGGACCCTGACCATCCCG GACCGCGGCGCCGCCTACCACGCCGTCGCCCACGCCCATGCCGGCCGCGTCATCGTCGAGCTCGAGCTGGAGCCGGATTC GGCCGACGATTTCGCCACGGCGAGCCAAGTCGACACCGAACTCGCCGTGGGGCGCCTGCGCGAGGCCGGAACCCTAGCGG AGGCCGCCCGGATCGCGGCCCTCGAGATCCGCGCCCTCACCGGGTTCGAGGCGGTGCTGGTCTACCGCTTCGACGTGGAC TGGAACGGCGAGGCCGTGGCGGAGGACAAGGTGCCCGGCTGGTCACGCAGCCTGCTGGGCCTGCGCTTTCCCGCCTCCGA CATTCCCGCCCAGGCCCGGGCCCTCTACACCAAGGCCAAGAGCCGCTTCGTCATCGACCGCGACAGCGTCCCGGTCGGGC TGGTCGCGGCGCCCGGGGCCGGAAACGGCCCGATCGACCTGACCTTCGCCCAGCACCGCACGCTCTCGCCGATCCACCTG GAGTACCAGCGCAACCTCGGCGTGAACGGCTCGATGTCGATCTCGATCATGGTCGAGGGACGGCTCTGGGGCCTGATGAT CGGTCACCATCGCCGCCCGCACTACGTCACGCCGGAGACGCGCGCGGCCGCCACGGTGCTCACCGACGCCTTCGCCATGC GGGTGGAGGAAATCGAGTCGCGCCGGCTCTGGGCCGAGCGGCAGGCGCATCTCGACGTCGAGGGACGCCTCGTGCGCGGC CTGACCCGATCCGACGACTTCGTCGCCGCCCTGACCGCCGGGACGACGACGCTGCTCGACCTGTTCAGCGCCACCGGCGC CGGCATCGTCTCCGGCGAGCGGGTCACGCTGATCGGACGGACGCCGCCGGCCGAGATGGTGGCGGCGATCGCGGGCTGGC TGCGGGCGCGCGTGCCGGAGGGCGAGGTCGTCTACAGCAGCGACAGCTTCAGCGCCGACTATCCGGAGACCGGCCCGCAT CGCGAGATCGCCAGCGGCCTGCTCTCGGCCTTCGTGGACGACTCGCGCGAGAACCTGCTGGTGTGGTTCCGGCCTGAGGT GCCCAGCACGGTCACGTGGGGCGGCGACCCGCGCAAGCCCGTCCTCGCCGGAAGCGGTCCCGTGGCGGTGCTGCCCCGCC GCTCGTTCGAGCGCTGGGTCGAGGAGCGCACCGGCTTCGCCGCGCCCTTCGCGGAATGGCAGGTCCAGCTCGCCGGCTCC CTGGCCGAGGCGGTCGAGGGCGTCGTGTTGCGCCAGCGGCGCAAGATCGACGAACTCACCGGCCTGCTCGCCGAGAAGGA GCGCCTGCTCGAGCAGAAGGATCTCCTCACGCGGGAGATCGACCACCGGGTCAAGAACTCCCTGCAGATCGTCTCGGCCT TCCTGCAGATGCAGCGGCGCCAGATCGCCGACGGCGAGGCCCGGCAGGCCTTCGCCGACACCTCCGCGCGGGTGATGAGC GTCGCGCGGGTGCACGACAGCCTGTACCAGGCGGATCGGTTCGACGAGGTCGATCTCGGCCAGACCATCGAGAGCCTGTG CAACGACCTCGCGGGGCTGGCCGGCGACGGGCACGCGGTCGACATGTCGGCGGAGCCCGGCCTGATGGTGCCCTACCGCA AGGCGGTGGCGCTCTCGCTGATCGCCACGGAACTCGTCACCAACGCCTTCAAGTACGCGGCGAACCCGGCCGGCGGCGGC CGTGTCGAGGTCAGCGTCTCGGCCTCCGGCCCCGGCGAGGTCCAGCTGCGCGTCTGCGACGACGGGGCCGGCCTGCCCGA CGACTGGGCCGACGCCAAGGCGCGGAGCAAGGGCTCGGGCCTCGGCATGAAACTGATCCGGGCGATGCTCGACCAGATCA ACGCCAAGCTCACCGTCGCCAACAATCCCGGCGCCTGCTTCACGATCACCGCGTGA
Upstream 100 bases:
>100_bases GATACAGAGAAGCTGAGGCGTTGATCTTGCCGATATCACAAGCATTGCGCTCGACCATTTCGGTCGCCATACCCCGCTGA ATACGCCGGTTTCGTTCCTG
Downstream 100 bases:
>100_bases GGTCCCGCGACGGCCTGCACGCGCGGCTGCGCGCCGCGACCGATCCGGCCCACCGGGCGCTGGAGGTGTCCCTCGACTGG CAGGCGCGGGTGGCGACGCT
Product: multi-sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 871; Mature: 870
Protein sequence:
>871_residues MPPSQIPDTDVDLDAIAPEALDRLDQGVIGLDPAGTVVAFSEGASAISGLSREAVLGRDYFRDVMPGTNVPSFRGRFLAG ARRGALDETFDYVFGRLPQPLRARIHMRHGQIGGLRPVTWLTIDPVESLGADLSREAVLAAIGQRVRAEPVDASICEREP IHIPGSIQPNAVMLAADAGTLLVAAYSANVGEIIDPIEPPLAGRPLADVLPAEFVAAIRARLASGTLDDGASMRRTLTIP DRGAAYHAVAHAHAGRVIVELELEPDSADDFATASQVDTELAVGRLREAGTLAEAARIAALEIRALTGFEAVLVYRFDVD WNGEAVAEDKVPGWSRSLLGLRFPASDIPAQARALYTKAKSRFVIDRDSVPVGLVAAPGAGNGPIDLTFAQHRTLSPIHL EYQRNLGVNGSMSISIMVEGRLWGLMIGHHRRPHYVTPETRAAATVLTDAFAMRVEEIESRRLWAERQAHLDVEGRLVRG LTRSDDFVAALTAGTTTLLDLFSATGAGIVSGERVTLIGRTPPAEMVAAIAGWLRARVPEGEVVYSSDSFSADYPETGPH REIASGLLSAFVDDSRENLLVWFRPEVPSTVTWGGDPRKPVLAGSGPVAVLPRRSFERWVEERTGFAAPFAEWQVQLAGS LAEAVEGVVLRQRRKIDELTGLLAEKERLLEQKDLLTREIDHRVKNSLQIVSAFLQMQRRQIADGEARQAFADTSARVMS VARVHDSLYQADRFDEVDLGQTIESLCNDLAGLAGDGHAVDMSAEPGLMVPYRKAVALSLIATELVTNAFKYAANPAGGG RVEVSVSASGPGEVQLRVCDDGAGLPDDWADAKARSKGSGLGMKLIRAMLDQINAKLTVANNPGACFTITA
Sequences:
>Translated_871_residues MPPSQIPDTDVDLDAIAPEALDRLDQGVIGLDPAGTVVAFSEGASAISGLSREAVLGRDYFRDVMPGTNVPSFRGRFLAG ARRGALDETFDYVFGRLPQPLRARIHMRHGQIGGLRPVTWLTIDPVESLGADLSREAVLAAIGQRVRAEPVDASICEREP IHIPGSIQPNAVMLAADAGTLLVAAYSANVGEIIDPIEPPLAGRPLADVLPAEFVAAIRARLASGTLDDGASMRRTLTIP DRGAAYHAVAHAHAGRVIVELELEPDSADDFATASQVDTELAVGRLREAGTLAEAARIAALEIRALTGFEAVLVYRFDVD WNGEAVAEDKVPGWSRSLLGLRFPASDIPAQARALYTKAKSRFVIDRDSVPVGLVAAPGAGNGPIDLTFAQHRTLSPIHL EYQRNLGVNGSMSISIMVEGRLWGLMIGHHRRPHYVTPETRAAATVLTDAFAMRVEEIESRRLWAERQAHLDVEGRLVRG LTRSDDFVAALTAGTTTLLDLFSATGAGIVSGERVTLIGRTPPAEMVAAIAGWLRARVPEGEVVYSSDSFSADYPETGPH REIASGLLSAFVDDSRENLLVWFRPEVPSTVTWGGDPRKPVLAGSGPVAVLPRRSFERWVEERTGFAAPFAEWQVQLAGS LAEAVEGVVLRQRRKIDELTGLLAEKERLLEQKDLLTREIDHRVKNSLQIVSAFLQMQRRQIADGEARQAFADTSARVMS VARVHDSLYQADRFDEVDLGQTIESLCNDLAGLAGDGHAVDMSAEPGLMVPYRKAVALSLIATELVTNAFKYAANPAGGG RVEVSVSASGPGEVQLRVCDDGAGLPDDWADAKARSKGSGLGMKLIRAMLDQINAKLTVANNPGACFTITA >Mature_870_residues PPSQIPDTDVDLDAIAPEALDRLDQGVIGLDPAGTVVAFSEGASAISGLSREAVLGRDYFRDVMPGTNVPSFRGRFLAGA RRGALDETFDYVFGRLPQPLRARIHMRHGQIGGLRPVTWLTIDPVESLGADLSREAVLAAIGQRVRAEPVDASICEREPI HIPGSIQPNAVMLAADAGTLLVAAYSANVGEIIDPIEPPLAGRPLADVLPAEFVAAIRARLASGTLDDGASMRRTLTIPD RGAAYHAVAHAHAGRVIVELELEPDSADDFATASQVDTELAVGRLREAGTLAEAARIAALEIRALTGFEAVLVYRFDVDW NGEAVAEDKVPGWSRSLLGLRFPASDIPAQARALYTKAKSRFVIDRDSVPVGLVAAPGAGNGPIDLTFAQHRTLSPIHLE YQRNLGVNGSMSISIMVEGRLWGLMIGHHRRPHYVTPETRAAATVLTDAFAMRVEEIESRRLWAERQAHLDVEGRLVRGL TRSDDFVAALTAGTTTLLDLFSATGAGIVSGERVTLIGRTPPAEMVAAIAGWLRARVPEGEVVYSSDSFSADYPETGPHR EIASGLLSAFVDDSRENLLVWFRPEVPSTVTWGGDPRKPVLAGSGPVAVLPRRSFERWVEERTGFAAPFAEWQVQLAGSL AEAVEGVVLRQRRKIDELTGLLAEKERLLEQKDLLTREIDHRVKNSLQIVSAFLQMQRRQIADGEARQAFADTSARVMSV ARVHDSLYQADRFDEVDLGQTIESLCNDLAGLAGDGHAVDMSAEPGLMVPYRKAVALSLIATELVTNAFKYAANPAGGGR VEVSVSASGPGEVQLRVCDDGAGLPDDWADAKARSKGSGLGMKLIRAMLDQINAKLTVANNPGACFTITA
Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]
COG id: COG4251
COG function: function code T; Bacteriophytochrome (light-regulated signal transduction histidine kinase)
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003018 - InterPro: IPR013654 - InterPro: IPR016132 - InterPro: IPR001294 - InterPro: IPR013515 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 93502; Mature: 93371
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS50112 PAS ; PS50109 HIS_KIN ; PS50046 PHYTOCHROME_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPSQIPDTDVDLDAIAPEALDRLDQGVIGLDPAGTVVAFSEGASAISGLSREAVLGRDY CCCCCCCCCCCCHHHCCHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHCCCHHHHHHHHH FRDVMPGTNVPSFRGRFLAGARRGALDETFDYVFGRLPQPLRARIHMRHGQIGGLRPVTW HHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCHHHHHHEEECCCCCCCCCCEEE LTIDPVESLGADLSREAVLAAIGQRVRAEPVDASICEREPIHIPGSIQPNAVMLAADAGT EEECCHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCEEEEEECCCE LLVAAYSANVGEIIDPIEPPLAGRPLADVLPAEFVAAIRARLASGTLDDGASMRRTLTIP EEEEEECCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECC DRGAAYHAVAHAHAGRVIVELELEPDSADDFATASQVDTELAVGRLREAGTLAEAARIAA CCCCHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEIRALTGFEAVLVYRFDVDWNGEAVAEDKVPGWSRSLLGLRFPASDIPAQARALYTKAK EEEEECCCCEEEEEEEEECCCCCCEEECCCCCCCCHHHHEEECCCCCCCHHHHHHHHHHC SRFVIDRDSVPVGLVAAPGAGNGPIDLTFAQHRTLSPIHLEYQRNLGVNGSMSISIMVEG CCEEEECCCCCEEEEECCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEEECC RLWGLMIGHHRRPHYVTPETRAAATVLTDAFAMRVEEIESRRLWAERQAHLDVEGRLVRG EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHC LTRSDDFVAALTAGTTTLLDLFSATGAGIVSGERVTLIGRTPPAEMVAAIAGWLRARVPE CCCCCCEEEEECCCHHHHHHHHHCCCCCEECCCEEEEEECCCHHHHHHHHHHHHHHCCCC GEVVYSSDSFSADYPETGPHREIASGLLSAFVDDSRENLLVWFRPEVPSTVTWGGDPRKP CCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEECCCCCCCC VLAGSGPVAVLPRRSFERWVEERTGFAAPFAEWQVQLAGSLAEAVEGVVLRQRRKIDELT EEECCCCEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLLAEKERLLEQKDLLTREIDHRVKNSLQIVSAFLQMQRRQIADGEARQAFADTSARVMS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH VARVHDSLYQADRFDEVDLGQTIESLCNDLAGLAGDGHAVDMSAEPGLMVPYRKAVALSL HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEECCHHHHHHHHH IATELVTNAFKYAANPAGGGRVEVSVSASGPGEVQLRVCDDGAGLPDDWADAKARSKGSG HHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCC LGMKLIRAMLDQINAKLTVANNPGACFTITA CHHHHHHHHHHHCCCEEEEECCCCCEEEEEC >Mature Secondary Structure PPSQIPDTDVDLDAIAPEALDRLDQGVIGLDPAGTVVAFSEGASAISGLSREAVLGRDY CCCCCCCCCCCHHHCCHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHCCCHHHHHHHHH FRDVMPGTNVPSFRGRFLAGARRGALDETFDYVFGRLPQPLRARIHMRHGQIGGLRPVTW HHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCHHHHHHEEECCCCCCCCCCEEE LTIDPVESLGADLSREAVLAAIGQRVRAEPVDASICEREPIHIPGSIQPNAVMLAADAGT EEECCHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCEEEEEECCCE LLVAAYSANVGEIIDPIEPPLAGRPLADVLPAEFVAAIRARLASGTLDDGASMRRTLTIP EEEEEECCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECC DRGAAYHAVAHAHAGRVIVELELEPDSADDFATASQVDTELAVGRLREAGTLAEAARIAA CCCCHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEIRALTGFEAVLVYRFDVDWNGEAVAEDKVPGWSRSLLGLRFPASDIPAQARALYTKAK EEEEECCCCEEEEEEEEECCCCCCEEECCCCCCCCHHHHEEECCCCCCCHHHHHHHHHHC SRFVIDRDSVPVGLVAAPGAGNGPIDLTFAQHRTLSPIHLEYQRNLGVNGSMSISIMVEG CCEEEECCCCCEEEEECCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEEECC RLWGLMIGHHRRPHYVTPETRAAATVLTDAFAMRVEEIESRRLWAERQAHLDVEGRLVRG EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHC LTRSDDFVAALTAGTTTLLDLFSATGAGIVSGERVTLIGRTPPAEMVAAIAGWLRARVPE CCCCCCEEEEECCCHHHHHHHHHCCCCCEECCCEEEEEECCCHHHHHHHHHHHHHHCCCC GEVVYSSDSFSADYPETGPHREIASGLLSAFVDDSRENLLVWFRPEVPSTVTWGGDPRKP CCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEECCCCCCCC VLAGSGPVAVLPRRSFERWVEERTGFAAPFAEWQVQLAGSLAEAVEGVVLRQRRKIDELT EEECCCCEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLLAEKERLLEQKDLLTREIDHRVKNSLQIVSAFLQMQRRQIADGEARQAFADTSARVMS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH VARVHDSLYQADRFDEVDLGQTIESLCNDLAGLAGDGHAVDMSAEPGLMVPYRKAVALSL HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEECCHHHHHHHHH IATELVTNAFKYAANPAGGGRVEVSVSASGPGEVQLRVCDDGAGLPDDWADAKARSKGSG HHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCC LGMKLIRAMLDQINAKLTVANNPGACFTITA CHHHHHHHHHHHCCCEEEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]