| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is nsrR [H]
Identifier: 170750041
GI number: 170750041
Start: 3875916
End: 3876407
Strand: Reverse
Name: nsrR [H]
Synonym: Mrad2831_3642
Alternate gene names: 170750041
Gene position: 3876407-3875916 (Counterclockwise)
Preceding gene: 170750043
Following gene: 170750033
Centisome position: 63.78
GC content: 75.0
Gene sequence:
>492_bases ATGCGCCTGACCCGCTACACGGATTACGCGCTGCGCACGCTGATCTACGTCGGGCTCCACGAGCCCGAGCAGAGCTCCAT CGCCGCGATCGCCCGCGCCTACGGCATCTCGGAGAATCACCTGACCAAGGTGGTCCACCAGCTGGGACGGCTGGGCCTGA TCCGGACGATCCGCGGCCGGGGCGGCGGCCTCCGCCTGGCGATGCCGCCGGGGGAGATCGTCGTCGGTGCGGTGGTGCGC CAGACCGAGGACGACCTGGCGCTGGTCGAGTGCTTCGGCGGCGGCGCCTGCGCCATCACGGCCCCGTGCCGGCTCCGGCG GGTGCTGGGGGAGGCTCTGGCGGCGTTCCTCGCCGTCCTCGACCGCTACACCCTGGCGGATCTGCTCGGCTCGCCGGACG GCGACGCGATCGCGGCGCTGCTGGGCCTCGCCGGGCCTCCGGGCGGCGAGCCGCCGATGCCGGCCGGTGCCGCGGGCCTG CCGGAGGCCTGA
Upstream 100 bases:
>100_bases CCCGCGTCGGCGGTGGTGCCGCTCCTCCGCAGGGCGTACGGACGCGGGTCGCGGCGGACACCGCATCGCCCCACGGCAGA GATCGTCTTCTGGAGTTGAG
Downstream 100 bases:
>100_bases CGGCCCGCGCGCCGCGCGGTCAGGTCGCCCGGGCCGAGAAATCGATCCGCGGGTCGATCCAGACGTAGATCAGGTCGGAC AGCAGGTTCACCGCGAGCCC
Product: BadM/Rrf2 family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MRLTRYTDYALRTLIYVGLHEPEQSSIAAIARAYGISENHLTKVVHQLGRLGLIRTIRGRGGGLRLAMPPGEIVVGAVVR QTEDDLALVECFGGGACAITAPCRLRRVLGEALAAFLAVLDRYTLADLLGSPDGDAIAALLGLAGPPGGEPPMPAGAAGL PEA
Sequences:
>Translated_163_residues MRLTRYTDYALRTLIYVGLHEPEQSSIAAIARAYGISENHLTKVVHQLGRLGLIRTIRGRGGGLRLAMPPGEIVVGAVVR QTEDDLALVECFGGGACAITAPCRLRRVLGEALAAFLAVLDRYTLADLLGSPDGDAIAALLGLAGPPGGEPPMPAGAAGL PEA >Mature_163_residues MRLTRYTDYALRTLIYVGLHEPEQSSIAAIARAYGISENHLTKVVHQLGRLGLIRTIRGRGGGLRLAMPPGEIVVGAVVR QTEDDLALVECFGGGACAITAPCRLRRVLGEALAAFLAVLDRYTLADLLGSPDGDAIAALLGLAGPPGGEPPMPAGAAGL PEA
Specific function: Nitric oxide-responsive transcriptional regulator [H]
COG id: COG1959
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1790621, Length=130, Percent_Identity=46.1538461538462, Blast_Score=117, Evalue=3e-28,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000944 - InterPro: IPR011991 [H]
Pfam domain/function: PF02082 Rrf2 [H]
EC number: NA
Molecular weight: Translated: 16936; Mature: 16936
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLTRYTDYALRTLIYVGLHEPEQSSIAAIARAYGISENHLTKVVHQLGRLGLIRTIRGR CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC GGGLRLAMPPGEIVVGAVVRQTEDDLALVECFGGGACAITAPCRLRRVLGEALAAFLAVL CCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHH DRYTLADLLGSPDGDAIAALLGLAGPPGGEPPMPAGAAGLPEA HHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRLTRYTDYALRTLIYVGLHEPEQSSIAAIARAYGISENHLTKVVHQLGRLGLIRTIRGR CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC GGGLRLAMPPGEIVVGAVVRQTEDDLALVECFGGGACAITAPCRLRRVLGEALAAFLAVL CCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHH DRYTLADLLGSPDGDAIAALLGLAGPPGGEPPMPAGAAGLPEA HHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA