| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yejA [C]
Identifier: 170750038
GI number: 170750038
Start: 3870998
End: 3872923
Strand: Direct
Name: yejA [C]
Synonym: Mrad2831_3639
Alternate gene names: 170750038
Gene position: 3870998-3872923 (Clockwise)
Preceding gene: 170750037
Following gene: 170750039
Centisome position: 63.69
GC content: 68.28
Gene sequence:
>1926_bases GTGACAGCGCAGACCGTGACTGGACGCCTCCTCGCCGCGACACTCCTCGCCGCCTGCCTCCAGTTCGCCCCGGCCCGTGC GCAGGAACCGGCCGCGATGCCGTCGACGCCGGCTGAGTTGCCTGCCACCCTGCCGGCCGCCAACGGCCAGTGGACCCACG CGATCACGCTGATGGGCCAGCCGAAATACGGCCCCGACTTCAAGCATTTCGACTACGCCGACCCGGCCGCGCCCAAGGGC GGGATGGTCCGGTTCGGGGCCCAGGGCGGGTTCGACAATTTCAACATCGTCGTCGCCGGCCTGAAGGGTGACCTCGAGAA CGGCATCCAGCAGATCTACGATTCGCTGATGACCGAGTCCTCGGACGAGCCGTTCACCTCCTACGGCCTGCTCGCCGAGG CGGTCCGGATCGCCCCCGATCTCGGCTCGGTCTCGTACCGGCTGCGCGAGAACGCCCGCTGGCACGACGGCCAGCCGATC ACGCCCGAGGACGTGGTCTGGTCCTTCGACGTGCTCAAGGCCAACAGCCCGTTCTACGCCGCCTACTACCAGACCGTGGC CAAGGCCGCGGTGACCGGGCCGCACGAGGTGACCTTCACCTTCACGGAGACCGGCAACCGCGAGTTGCCGCAGGTGATCG GGCAGCTGCGCGTCCTGCCCAAGCACTGGTGGACCGCCAAGGACGCCAACGGCAAGCCGCGCAGCGTCACCGAGACGACC CTGGAGCCGCCGCTGGGCTCGGGCCCCTATCGCCTCGCGAAGTTCGAGCCGGGCCGCACGACGACCTACACCCGCGTGCC CGACTACTGGGGCAAGGACCTGCCGGTGAACGCCGGGCGCTACAACTTCGACACCGAGCGCTACGAGTATTTCCGCGACG GCACCGTGCTGGTCGAGGCGCTGAAGGGCGACCTCTACGACTTCCGGGTGGAGAACATCGCCCGGAACTGGGCGACCGCC TACGAGGATTTCCCGGCCGTGAAGGAGGGCCGGCTGATCAAGGAGGCGTTCCCCGAGCGCGGCATGGGCATCATGCAGGC CTTCGCGTTCAACACGCGCCGGGACAAGTTCAAGGATCCGCGCGTCCGCCGGGCCTTCAACCTCGCGCTGAACTACGAGG AGATGAACAAGGCCCTGTTCTACGGCCTGTACAAGCGGATCAACTCCTACTTCTTCGGCTCGGAGCTGGCCTCCTCCGGC CTGCCCGAGGGCGAGGAGAAGGCGATCCTCGAGAGCGTCAAGGACAAGGTCCCGGCCTCGGTCTTCACCACCCCCTACGC CAACCCGGTCAACGACGGCCCCGAGGCCGTGCGCAAGAACCTCCGCGAGGCCGTCGGCCTGCTGCGCGAGGCCGGCTACG AGCTGCGCGGCGGCAAGATGGTCAGCAAGGCCACCGGCGAGCCGCTGACCGTCGAGTTCCTGGAGTTCCAGAACACCTTC GAGCGGGTCATCCTGCCGTTCGCGGCGCAGCTGAAGCTGATCGGCATCGACTCCACCCTCCGGGTGATCGACCAGGCGCA GTACCAGAACCGCATCCGCAACTTCGACTTCGACGTCACCACGGCGTCGTGGGGCGAGTCGCTCTCGCCCGGCAACGAGC AGCGCGAGTACTGGGGCTCGGCGGCGGCCGACAAGCCCGGCTCGCGCAACCTGATCGGGATCAAGGATCCCGGCATCGAC GCCCTGATCGAGAAGGTGATCTTCGCCAAGGACCGGCACACCGTGATCGCGGCGACGCGCGCCCTCGACCGGGTGCTCCT CGCCCACGACTACGTCGTCCCGCAATGGTCCTCCGACCAGCAGCGGACGCTGCGCTGGAACCGGTTCGGCCACCCGGCGA TCCTGCCGCTCTACGCCAGTTCCGGCTTCCCGACGACGTGGTGGTACGACGAGAAGCTCGCGGCCAAGACCGGGGCGCCC CGTTGA
Upstream 100 bases:
>100_bases CGGCGCATGGTCGACGGGTGGCCGCCCGCGTCCTATGACCCCGGTACTCTCGAGATGTCCGCGCCGCGCGCGGGCCCGAC GCAACGGAGACAGCCTGCCC
Downstream 100 bases:
>100_bases CGGGGGCGCCCGGGATGCCGACCCGGCGCGGCCTGGTCCTCGGGGCCGGCGCCCTCGCGGCGATGCCGCCGTGGCGCCGC GCCCGCGCGGCCGAGGGGGC
Product: extracellular solute-binding protein
Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 641; Mature: 640
Protein sequence:
>641_residues MTAQTVTGRLLAATLLAACLQFAPARAQEPAAMPSTPAELPATLPAANGQWTHAITLMGQPKYGPDFKHFDYADPAAPKG GMVRFGAQGGFDNFNIVVAGLKGDLENGIQQIYDSLMTESSDEPFTSYGLLAEAVRIAPDLGSVSYRLRENARWHDGQPI TPEDVVWSFDVLKANSPFYAAYYQTVAKAAVTGPHEVTFTFTETGNRELPQVIGQLRVLPKHWWTAKDANGKPRSVTETT LEPPLGSGPYRLAKFEPGRTTTYTRVPDYWGKDLPVNAGRYNFDTERYEYFRDGTVLVEALKGDLYDFRVENIARNWATA YEDFPAVKEGRLIKEAFPERGMGIMQAFAFNTRRDKFKDPRVRRAFNLALNYEEMNKALFYGLYKRINSYFFGSELASSG LPEGEEKAILESVKDKVPASVFTTPYANPVNDGPEAVRKNLREAVGLLREAGYELRGGKMVSKATGEPLTVEFLEFQNTF ERVILPFAAQLKLIGIDSTLRVIDQAQYQNRIRNFDFDVTTASWGESLSPGNEQREYWGSAAADKPGSRNLIGIKDPGID ALIEKVIFAKDRHTVIAATRALDRVLLAHDYVVPQWSSDQQRTLRWNRFGHPAILPLYASSGFPTTWWYDEKLAAKTGAP R
Sequences:
>Translated_641_residues MTAQTVTGRLLAATLLAACLQFAPARAQEPAAMPSTPAELPATLPAANGQWTHAITLMGQPKYGPDFKHFDYADPAAPKG GMVRFGAQGGFDNFNIVVAGLKGDLENGIQQIYDSLMTESSDEPFTSYGLLAEAVRIAPDLGSVSYRLRENARWHDGQPI TPEDVVWSFDVLKANSPFYAAYYQTVAKAAVTGPHEVTFTFTETGNRELPQVIGQLRVLPKHWWTAKDANGKPRSVTETT LEPPLGSGPYRLAKFEPGRTTTYTRVPDYWGKDLPVNAGRYNFDTERYEYFRDGTVLVEALKGDLYDFRVENIARNWATA YEDFPAVKEGRLIKEAFPERGMGIMQAFAFNTRRDKFKDPRVRRAFNLALNYEEMNKALFYGLYKRINSYFFGSELASSG LPEGEEKAILESVKDKVPASVFTTPYANPVNDGPEAVRKNLREAVGLLREAGYELRGGKMVSKATGEPLTVEFLEFQNTF ERVILPFAAQLKLIGIDSTLRVIDQAQYQNRIRNFDFDVTTASWGESLSPGNEQREYWGSAAADKPGSRNLIGIKDPGID ALIEKVIFAKDRHTVIAATRALDRVLLAHDYVVPQWSSDQQRTLRWNRFGHPAILPLYASSGFPTTWWYDEKLAAKTGAP R >Mature_640_residues TAQTVTGRLLAATLLAACLQFAPARAQEPAAMPSTPAELPATLPAANGQWTHAITLMGQPKYGPDFKHFDYADPAAPKGG MVRFGAQGGFDNFNIVVAGLKGDLENGIQQIYDSLMTESSDEPFTSYGLLAEAVRIAPDLGSVSYRLRENARWHDGQPIT PEDVVWSFDVLKANSPFYAAYYQTVAKAAVTGPHEVTFTFTETGNRELPQVIGQLRVLPKHWWTAKDANGKPRSVTETTL EPPLGSGPYRLAKFEPGRTTTYTRVPDYWGKDLPVNAGRYNFDTERYEYFRDGTVLVEALKGDLYDFRVENIARNWATAY EDFPAVKEGRLIKEAFPERGMGIMQAFAFNTRRDKFKDPRVRRAFNLALNYEEMNKALFYGLYKRINSYFFGSELASSGL PEGEEKAILESVKDKVPASVFTTPYANPVNDGPEAVRKNLREAVGLLREAGYELRGGKMVSKATGEPLTVEFLEFQNTFE RVILPFAAQLKLIGIDSTLRVIDQAQYQNRIRNFDFDVTTASWGESLSPGNEQREYWGSAAADKPGSRNLIGIKDPGIDA LIEKVIFAKDRHTVIAATRALDRVLLAHDYVVPQWSSDQQRTLRWNRFGHPAILPLYASSGFPTTWWYDEKLAAKTGAPR
Specific function: Possible binding-protein with either a transport or enzymatic activity [H]
COG id: COG4166
COG function: function code E; ABC-type oligopeptide transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI87082063, Length=588, Percent_Identity=37.7551020408163, Blast_Score=386, Evalue=1e-108,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 71553; Mature: 71422
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAQTVTGRLLAATLLAACLQFAPARAQEPAAMPSTPAELPATLPAANGQWTHAITLMGQ CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEC PKYGPDFKHFDYADPAAPKGGMVRFGAQGGFDNFNIVVAGLKGDLENGIQQIYDSLMTES CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCC SDEPFTSYGLLAEAVRIAPDLGSVSYRLRENARWHDGQPITPEDVVWSFDVLKANSPFYA CCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCHHHHEEEEEEEECCCCCHH AYYQTVAKAAVTGPHEVTFTFTETGNRELPQVIGQLRVLPKHWWTAKDANGKPRSVTETT HHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC LEPPLGSGPYRLAKFEPGRTTTYTRVPDYWGKDLPVNAGRYNFDTERYEYFRDGTVLVEA CCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHH LKGDLYDFRVENIARNWATAYEDFPAVKEGRLIKEAFPERGMGIMQAFAFNTRRDKFKDP HHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCCHHCCCCC RVRRAFNLALNYEEMNKALFYGLYKRINSYFFGSELASSGLPEGEEKAILESVKDKVPAS HHHHHHHHEECHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHCCCC VFTTPYANPVNDGPEAVRKNLREAVGLLREAGYELRGGKMVSKATGEPLTVEFLEFQNTF EECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEHHHHHHHHH ERVILPFAAQLKLIGIDSTLRVIDQAQYQNRIRNFDFDVTTASWGESLSPGNEQREYWGS HHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHCCC AAADKPGSRNLIGIKDPGIDALIEKVIFAKDRHTVIAATRALDRVLLAHDYVVPQWSSDQ CCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCH QRTLRWNRFGHPAILPLYASSGFPTTWWYDEKLAAKTGAPR HHHHHHHCCCCCEEEEEEECCCCCCEEEECCHHHCCCCCCC >Mature Secondary Structure TAQTVTGRLLAATLLAACLQFAPARAQEPAAMPSTPAELPATLPAANGQWTHAITLMGQ CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEC PKYGPDFKHFDYADPAAPKGGMVRFGAQGGFDNFNIVVAGLKGDLENGIQQIYDSLMTES CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCC SDEPFTSYGLLAEAVRIAPDLGSVSYRLRENARWHDGQPITPEDVVWSFDVLKANSPFYA CCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCHHHHEEEEEEEECCCCCHH AYYQTVAKAAVTGPHEVTFTFTETGNRELPQVIGQLRVLPKHWWTAKDANGKPRSVTETT HHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC LEPPLGSGPYRLAKFEPGRTTTYTRVPDYWGKDLPVNAGRYNFDTERYEYFRDGTVLVEA CCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHH LKGDLYDFRVENIARNWATAYEDFPAVKEGRLIKEAFPERGMGIMQAFAFNTRRDKFKDP HHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCCHHCCCCC RVRRAFNLALNYEEMNKALFYGLYKRINSYFFGSELASSGLPEGEEKAILESVKDKVPAS HHHHHHHHEECHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHCCCC VFTTPYANPVNDGPEAVRKNLREAVGLLREAGYELRGGKMVSKATGEPLTVEFLEFQNTF EECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEHHHHHHHHH ERVILPFAAQLKLIGIDSTLRVIDQAQYQNRIRNFDFDVTTASWGESLSPGNEQREYWGS HHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHCCC AAADKPGSRNLIGIKDPGIDALIEKVIFAKDRHTVIAATRALDRVLLAHDYVVPQWSSDQ CCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCH QRTLRWNRFGHPAILPLYASSGFPTTWWYDEKLAAKTGAPR HHHHHHHCCCCCEEEEEEECCCCCCEEEECCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; oligopeptides [Periplasm]; H2O [C]
Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]