| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is cbbP [H]
Identifier: 170749957
GI number: 170749957
Start: 3776403
End: 3777263
Strand: Reverse
Name: cbbP [H]
Synonym: Mrad2831_3558
Alternate gene names: 170749957
Gene position: 3777263-3776403 (Counterclockwise)
Preceding gene: 170749958
Following gene: 170749956
Centisome position: 62.15
GC content: 65.85
Gene sequence:
>861_bases ATGTCGGCGCGGCACCCCATCATCTCGGTGACCGGCTCCTCCGGGGCCGGGACCACCTCGGTGCGCAACACCTTCGAGCA GATCTTCCGCCGCGAGGACGTGCGGGCGGTCTTCATCGAGGGGGACGGCTTCCACGCCTTCGACCGCGACACGATGCGGG CGATGATGGCGAACGAGCCGACACTGTCCCACTTCGCGCCGCGGGCCAACCTCCTGCCCGAGCTGGAGGCGGTGTTCCGC AGCTACGCCGAGTCCGGGACGGGCCGGACCCGTCACTACGCCCACGATCAGCACGACGCGCAGGCCTACGGCATCCCGGA GGGCAGTTTCTCGGACTGGGAGACGTTCCCACCCGATTCCGACCTGCTGTTCTACGAGGGCCTGCACGGCTGCGTCGCCG ATCAGGACGTCGACATCGCCCGCTACGCCGACCTGAAGATCGGCGTCGTGCCGGTGATCAACCTCGAATGGATCCAGAAG CTGCACCGGGACCGCTCGTTCCGCGGCTACTCCACCGAGGCGGTGACCGACGTGATCCTGCGGCGCATGCCCGACTACGT GCAGACCATCTGCCCGCAATTCTCGTTCACCGACATCAACTTCCAGCGGGTGCCGACGGTCGACACGTCGAACCCGTTCA TCGCCCGCTGGATTCCCACCGCCGACGAATCGATGGTCGTGATCCGCTTCAAGGACCCGAAGGGGATCGACTTCTCGTAT CTCGTCTCCATGATTCACGACAGTTTCATGAGCCGGGCCAACTCCATCGTGATCCCCGGCGGCAAGCTCGACCTGGCGAT GCAGCTGATCCTGACACCGATGATCATGCAGCTCGTCGAGCGCCGCCGCCGGCTGGCCTGA
Upstream 100 bases:
>100_bases CCACCTACTATGCCGGCGGCAAGCCCGATGCCGGCCGCTCGCCGCTCTTCGGCCAGCGCGGCCTGATGCGGTCATAACCG CACCGTGAAGTCGTAAAGGC
Downstream 100 bases:
>100_bases GCCGATCCCGAAAGCCTCCCATGCTCGCACCCGTCATCGCCCCGTCGATCCTGTCCGCCGACTTCTCGAAGCTCGCCGAG GAGACGCGCGCCGTGGACGC
Product: phosphoribulokinase
Products: NA
Alternate protein names: PRK; PRKase; Phosphopentokinase [H]
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MSARHPIISVTGSSGAGTTSVRNTFEQIFRREDVRAVFIEGDGFHAFDRDTMRAMMANEPTLSHFAPRANLLPELEAVFR SYAESGTGRTRHYAHDQHDAQAYGIPEGSFSDWETFPPDSDLLFYEGLHGCVADQDVDIARYADLKIGVVPVINLEWIQK LHRDRSFRGYSTEAVTDVILRRMPDYVQTICPQFSFTDINFQRVPTVDTSNPFIARWIPTADESMVVIRFKDPKGIDFSY LVSMIHDSFMSRANSIVIPGGKLDLAMQLILTPMIMQLVERRRRLA
Sequences:
>Translated_286_residues MSARHPIISVTGSSGAGTTSVRNTFEQIFRREDVRAVFIEGDGFHAFDRDTMRAMMANEPTLSHFAPRANLLPELEAVFR SYAESGTGRTRHYAHDQHDAQAYGIPEGSFSDWETFPPDSDLLFYEGLHGCVADQDVDIARYADLKIGVVPVINLEWIQK LHRDRSFRGYSTEAVTDVILRRMPDYVQTICPQFSFTDINFQRVPTVDTSNPFIARWIPTADESMVVIRFKDPKGIDFSY LVSMIHDSFMSRANSIVIPGGKLDLAMQLILTPMIMQLVERRRRLA >Mature_285_residues SARHPIISVTGSSGAGTTSVRNTFEQIFRREDVRAVFIEGDGFHAFDRDTMRAMMANEPTLSHFAPRANLLPELEAVFRS YAESGTGRTRHYAHDQHDAQAYGIPEGSFSDWETFPPDSDLLFYEGLHGCVADQDVDIARYADLKIGVVPVINLEWIQKL HRDRSFRGYSTEAVTDVILRRMPDYVQTICPQFSFTDINFQRVPTVDTSNPFIARWIPTADESMVVIRFKDPKGIDFSYL VSMIHDSFMSRANSIVIPGGKLDLAMQLILTPMIMQLVERRRRLA
Specific function: Unknown
COG id: COG3954
COG function: function code C; Phosphoribulokinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoribulokinase family [H]
Homologues:
Organism=Escherichia coli, GI2367214, Length=287, Percent_Identity=48.780487804878, Blast_Score=291, Evalue=4e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006082 - InterPro: IPR006083 [H]
Pfam domain/function: PF00485 PRK [H]
EC number: =2.7.1.19 [H]
Molecular weight: Translated: 32469; Mature: 32338
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: PS00567 PHOSPHORIBULOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARHPIISVTGSSGAGTTSVRNTFEQIFRREDVRAVFIEGDGFHAFDRDTMRAMMANEP CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHCCCC TLSHFAPRANLLPELEAVFRSYAESGTGRTRHYAHDQHDAQAYGIPEGSFSDWETFPPDS CHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC DLLFYEGLHGCVADQDVDIARYADLKIGVVPVINLEWIQKLHRDRSFRGYSTEAVTDVIL CEEEECCCCCCCCCCCCCHHHCCCCEEEEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHH RRMPDYVQTICPQFSFTDINFQRVPTVDTSNPFIARWIPTADESMVVIRFKDPKGIDFSY HHCHHHHHHHCCCCCCCCCCCEECCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCHHH LVSMIHDSFMSRANSIVIPGGKLDLAMQLILTPMIMQLVERRRRLA HHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SARHPIISVTGSSGAGTTSVRNTFEQIFRREDVRAVFIEGDGFHAFDRDTMRAMMANEP CCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHCCCC TLSHFAPRANLLPELEAVFRSYAESGTGRTRHYAHDQHDAQAYGIPEGSFSDWETFPPDS CHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC DLLFYEGLHGCVADQDVDIARYADLKIGVVPVINLEWIQKLHRDRSFRGYSTEAVTDVIL CEEEECCCCCCCCCCCCCHHHCCCCEEEEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHH RRMPDYVQTICPQFSFTDINFQRVPTVDTSNPFIARWIPTADESMVVIRFKDPKGIDFSY HHCHHHHHHHCCCCCCCCCCCEECCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCHHH LVSMIHDSFMSRANSIVIPGGKLDLAMQLILTPMIMQLVERRRRLA HHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA