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The map label for this gene is cbbE [H]

Identifier: 170749956

GI number: 170749956

Start: 3775696

End: 3776382

Strand: Reverse

Name: cbbE [H]

Synonym: Mrad2831_3557

Alternate gene names: 170749956

Gene position: 3776382-3775696 (Counterclockwise)

Preceding gene: 170749957

Following gene: 170749955

Centisome position: 62.13

GC content: 71.32

Gene sequence:

>687_bases
ATGCTCGCACCCGTCATCGCCCCGTCGATCCTGTCCGCCGACTTCTCGAAGCTCGCCGAGGAGACGCGCGCCGTGGACGC
GGCCGGGGCCGACTGGATCCACCTCGACGTGATGGACGGCCATTTCGTGCCCAACATCACCTTCGGGCCGCCGGTGGTGA
AGGCGCTCCGGCCCCACACCCAGAAATACTTCGACGTGCACCTGATGATCGCGCCGGCCGATCCGTACCTGGCGGCGTTC
GCGCAGGCCGGCGCCGACGGCATCACGGTCCACGCCGAGGCCGGGCCGCACATCCACCGCTCGCTTCAGACCATCCGCGA
CCTCGGCAAGCGCGCCGGCGTGGCGATCAACCCGGGTACGCCGGCCGCCATGGTCGAGCCGGTGCTCGACCTCGTGGATC
TCGTGCTGGTGATGACCGTCAATCCCGGCTTCGGCGGCCAGAGCTTCGTCAAGGGCGCGATGGAATCGGTGGCGCGGGTG
CGCGCCATGGTGGCGGGCCGGGACATCCGCATCCAGGTCGACGGCGGGATCGATCCCGAGACCGTGAAGGTCGCGAGCCG
CGCCGGGGCCGACACGTTCGTTGCCGGCAACGCCGTGTTCAGCGGCGGCCCGGACGCCTACGCCGAGCGCATCGCGGCGA
TCCGCGAGGGCGCGGAGGGCGCCTCCGGTCGCGACCTGTCGTGCTGA

Upstream 100 bases:

>100_bases
GCAAGCTCGACCTGGCGATGCAGCTGATCCTGACACCGATGATCATGCAGCTCGTCGAGCGCCGCCGCCGGCTGGCCTGA
GCCGATCCCGAAAGCCTCCC

Downstream 100 bases:

>100_bases
GGGCGCTGATCTTCGACGTCGACGGGACCCTCGCCGAGACGGAGGATCTGCACCGGCAGGCGTTCAACCGCGCCTTCGCG
GAGCTCGGCCTGCCCTGGCG

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MLAPVIAPSILSADFSKLAEETRAVDAAGADWIHLDVMDGHFVPNITFGPPVVKALRPHTQKYFDVHLMIAPADPYLAAF
AQAGADGITVHAEAGPHIHRSLQTIRDLGKRAGVAINPGTPAAMVEPVLDLVDLVLVMTVNPGFGGQSFVKGAMESVARV
RAMVAGRDIRIQVDGGIDPETVKVASRAGADTFVAGNAVFSGGPDAYAERIAAIREGAEGASGRDLSC

Sequences:

>Translated_228_residues
MLAPVIAPSILSADFSKLAEETRAVDAAGADWIHLDVMDGHFVPNITFGPPVVKALRPHTQKYFDVHLMIAPADPYLAAF
AQAGADGITVHAEAGPHIHRSLQTIRDLGKRAGVAINPGTPAAMVEPVLDLVDLVLVMTVNPGFGGQSFVKGAMESVARV
RAMVAGRDIRIQVDGGIDPETVKVASRAGADTFVAGNAVFSGGPDAYAERIAAIREGAEGASGRDLSC
>Mature_228_residues
MLAPVIAPSILSADFSKLAEETRAVDAAGADWIHLDVMDGHFVPNITFGPPVVKALRPHTQKYFDVHLMIAPADPYLAAF
AQAGADGITVHAEAGPHIHRSLQTIRDLGKRAGVAINPGTPAAMVEPVLDLVDLVLVMTVNPGFGGQSFVKGAMESVARV
RAMVAGRDIRIQVDGGIDPETVKVASRAGADTFVAGNAVFSGGPDAYAERIAAIREGAEGASGRDLSC

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=197, Percent_Identity=43.1472081218274, Blast_Score=166, Evalue=2e-41,
Organism=Homo sapiens, GI219879828, Length=197, Percent_Identity=40.6091370558376, Blast_Score=152, Evalue=2e-37,
Organism=Homo sapiens, GI24307923, Length=153, Percent_Identity=33.3333333333333, Blast_Score=89, Evalue=4e-18,
Organism=Escherichia coli, GI1789788, Length=218, Percent_Identity=47.7064220183486, Blast_Score=196, Evalue=1e-51,
Organism=Escherichia coli, GI1790523, Length=196, Percent_Identity=36.2244897959184, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1790754, Length=199, Percent_Identity=33.1658291457286, Blast_Score=94, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17552948, Length=228, Percent_Identity=40.3508771929825, Blast_Score=179, Evalue=1e-45,
Organism=Saccharomyces cerevisiae, GI6322341, Length=214, Percent_Identity=43.4579439252336, Blast_Score=172, Evalue=3e-44,
Organism=Drosophila melanogaster, GI24586301, Length=212, Percent_Identity=41.5094339622642, Blast_Score=164, Evalue=5e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 23742; Mature: 23742

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAPVIAPSILSADFSKLAEETRAVDAAGADWIHLDVMDGHFVPNITFGPPVVKALRPHT
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCC
QKYFDVHLMIAPADPYLAAFAQAGADGITVHAEAGPHIHRSLQTIRDLGKRAGVAINPGT
CCEEEEEEEEECCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCEEECCCC
PAAMVEPVLDLVDLVLVMTVNPGFGGQSFVKGAMESVARVRAMVAGRDIRIQVDGGIDPE
CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHH
TVKVASRAGADTFVAGNAVFSGGPDAYAERIAAIREGAEGASGRDLSC
HHHHHHHCCCCEEEECCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MLAPVIAPSILSADFSKLAEETRAVDAAGADWIHLDVMDGHFVPNITFGPPVVKALRPHT
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCC
QKYFDVHLMIAPADPYLAAFAQAGADGITVHAEAGPHIHRSLQTIRDLGKRAGVAINPGT
CCEEEEEEEEECCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCEEECCCC
PAAMVEPVLDLVDLVLVMTVNPGFGGQSFVKGAMESVARVRAMVAGRDIRIQVDGGIDPE
CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHH
TVKVASRAGADTFVAGNAVFSGGPDAYAERIAAIREGAEGASGRDLSC
HHHHHHHCCCCEEEECCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA