| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yebQ [H]
Identifier: 170749920
GI number: 170749920
Start: 3734626
End: 3736053
Strand: Direct
Name: yebQ [H]
Synonym: Mrad2831_3520
Alternate gene names: 170749920
Gene position: 3734626-3736053 (Clockwise)
Preceding gene: 170749919
Following gene: 170749921
Centisome position: 61.45
GC content: 72.9
Gene sequence:
>1428_bases ATGGCGCAGGTCCCGCACGGTCCGACAGGCGGCGCGCCGGGCAGCCCCCAGCCGCCCCCGCAGGCGCCCGTCCAGGACGG CCTGCCGCCCCGCGAGCGCGTCCTCGCCATGGCGGCGATCGGGCTTGCCATGACCATGGCGGTCCTCGACGGGGCCATCG TCAACGTGGCGCTGCCCGTCATGGCGAAGGACCTCTCGGTCAGGCCGGCCGACGCGATCTTCGTGGTCAACGCCTATCAG GTCGCCGTCACGGCGAGCCTCCTGCCCTTCGCGGCCCTCGGCGACATCTTCGGCTTCCGGAAGGTCTACCTGCCGGGGCT CGCGGTGTTCGTCGCCGCCTCCCTCGCCTGCGCGGTCGCGCCGAACCTGCCGCTCCTGATCGCGGCCCGCATCGTCCAGG GTCTCGGGGGCGCGGCGATCATGAGCGTCAACATCGGCTTCGTGCGCTTCATCTACCCGCACCGGATGATCGGCCAGGGG GTCGCCAACGTCGCGCTCGTGGTGGCGGTCGCCTCGGCCGCCGGCCCGACCGTGGCCGCGGCGATCCTGTCGGTGGCGAC CTGGCCCTGGCTGTTCCTCGTGAACATCCCCGTGGGCCTCCTGGCCCTGACGGTGGCGTCCCGGACCCTGCCGGTCACAC CGGCGAGCGGCCGGCCGTTCGATCTCGTGAGTGCGGTGCTCAACGCCCTGACCTTCGGCCTGCTGATCATCGGGATCGAC GGCCTCGGCGATCCGGAAGCCCGGGGCGTCGCCATCGTCGAACTCGCGGCCGCCCTGGTGGTCGGCGCGGTGTTCGTCCG GCGTCAGATCCGGCTGCCCGCACCGCTCCTGCCGGTCGACCTGCTGCGGATCCCCGCCTTCGCCCTGTCGATGGCGACGT CGGTCGCCTCGTTCTGCGCCCAGATGGTCTCCTACGTGGCGCTGCCCTTCTACTTCCAGGACGTGCTGCACCTCTCCAGC ACCCAGACGGGCTTCCTGCTCACCCCCTGGCCGATCGCGGTCGCCGCGATGGCGCCGATCTCCGGCCGCCTCGCGGACCG CTACCCGCCCGGCATCCTCGGCGGCATCGGACTGGCCATGATGGCCGCCGGGCTCGTCAGCGTGACCCTCCTGCCCGCGG TGCCCGCCATCCTCGACATCGTCTGGCGGCTGACCCTGTGCGGCCTCGGCTTCGGCCTGTTCCAGTCGCCCAACAATAAG GTCATCGTCACCTCGGCACCGCGCGAGCGGGCCGGCGGGGCGAGCGGGATGCAGTCGACGGCGCGGCTCACCGGGCAGTC GCTCGGCGCGGCCCTGGTGGCGGTGATCTTCGGCCTGACCCACGGGCTCGGGGCCGAGCGGGCCGTGACCATCTCGCTGT CCTGCGCGGTGGCGCTCTCGGTGATCGGCGGCTGCGCCAGCGTCCTGCGGCGGAGTCGGAGCGGCTAG
Upstream 100 bases:
>100_bases GCCTGCGCGACAGGGAGCAGCATCCGCCTCGCGTCCCGCGTCCGGATTTCCCAGCCATCGACGTCACGGACCCGCCGGGA CGCCGCAGGAGCGCGCACCC
Downstream 100 bases:
>100_bases ACCGGTCCCGTATGCCACCGCGGGCACCGGACCGCGTTGACGGAACGAGTCACGTGCTGGAGCGTCCCATGGATCTCGAT CTCACCGGCCGGAAGGCCCT
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 475; Mature: 474
Protein sequence:
>475_residues MAQVPHGPTGGAPGSPQPPPQAPVQDGLPPRERVLAMAAIGLAMTMAVLDGAIVNVALPVMAKDLSVRPADAIFVVNAYQ VAVTASLLPFAALGDIFGFRKVYLPGLAVFVAASLACAVAPNLPLLIAARIVQGLGGAAIMSVNIGFVRFIYPHRMIGQG VANVALVVAVASAAGPTVAAAILSVATWPWLFLVNIPVGLLALTVASRTLPVTPASGRPFDLVSAVLNALTFGLLIIGID GLGDPEARGVAIVELAAALVVGAVFVRRQIRLPAPLLPVDLLRIPAFALSMATSVASFCAQMVSYVALPFYFQDVLHLSS TQTGFLLTPWPIAVAAMAPISGRLADRYPPGILGGIGLAMMAAGLVSVTLLPAVPAILDIVWRLTLCGLGFGLFQSPNNK VIVTSAPRERAGGASGMQSTARLTGQSLGAALVAVIFGLTHGLGAERAVTISLSCAVALSVIGGCASVLRRSRSG
Sequences:
>Translated_475_residues MAQVPHGPTGGAPGSPQPPPQAPVQDGLPPRERVLAMAAIGLAMTMAVLDGAIVNVALPVMAKDLSVRPADAIFVVNAYQ VAVTASLLPFAALGDIFGFRKVYLPGLAVFVAASLACAVAPNLPLLIAARIVQGLGGAAIMSVNIGFVRFIYPHRMIGQG VANVALVVAVASAAGPTVAAAILSVATWPWLFLVNIPVGLLALTVASRTLPVTPASGRPFDLVSAVLNALTFGLLIIGID GLGDPEARGVAIVELAAALVVGAVFVRRQIRLPAPLLPVDLLRIPAFALSMATSVASFCAQMVSYVALPFYFQDVLHLSS TQTGFLLTPWPIAVAAMAPISGRLADRYPPGILGGIGLAMMAAGLVSVTLLPAVPAILDIVWRLTLCGLGFGLFQSPNNK VIVTSAPRERAGGASGMQSTARLTGQSLGAALVAVIFGLTHGLGAERAVTISLSCAVALSVIGGCASVLRRSRSG >Mature_474_residues AQVPHGPTGGAPGSPQPPPQAPVQDGLPPRERVLAMAAIGLAMTMAVLDGAIVNVALPVMAKDLSVRPADAIFVVNAYQV AVTASLLPFAALGDIFGFRKVYLPGLAVFVAASLACAVAPNLPLLIAARIVQGLGGAAIMSVNIGFVRFIYPHRMIGQGV ANVALVVAVASAAGPTVAAAILSVATWPWLFLVNIPVGLLALTVASRTLPVTPASGRPFDLVSAVLNALTFGLLIIGIDG LGDPEARGVAIVELAAALVVGAVFVRRQIRLPAPLLPVDLLRIPAFALSMATSVASFCAQMVSYVALPFYFQDVLHLSST QTGFLLTPWPIAVAAMAPISGRLADRYPPGILGGIGLAMMAAGLVSVTLLPAVPAILDIVWRLTLCGLGFGLFQSPNNKV IVTSAPRERAGGASGMQSTARLTGQSLGAALVAVIFGLTHGLGAERAVTISLSCAVALSVIGGCASVLRRSRSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=455, Percent_Identity=55.3846153846154, Blast_Score=463, Evalue=1e-131, Organism=Escherichia coli, GI1790195, Length=259, Percent_Identity=30.5019305019305, Blast_Score=118, Evalue=7e-28, Organism=Escherichia coli, GI1789042, Length=427, Percent_Identity=24.1217798594848, Blast_Score=93, Evalue=4e-20, Organism=Escherichia coli, GI1788392, Length=406, Percent_Identity=25.8620689655172, Blast_Score=92, Evalue=8e-20, Organism=Escherichia coli, GI1788710, Length=420, Percent_Identity=23.0952380952381, Blast_Score=90, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6322958, Length=198, Percent_Identity=25.7575757575758, Blast_Score=64, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 48431; Mature: 48300
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQVPHGPTGGAPGSPQPPPQAPVQDGLPPRERVLAMAAIGLAMTMAVLDGAIVNVALPV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAKDLSVRPADAIFVVNAYQVAVTASLLPFAALGDIFGFRKVYLPGLAVFVAASLACAVA HHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PNLPLLIAARIVQGLGGAAIMSVNIGFVRFIYPHRMIGQGVANVALVVAVASAAGPTVAA CCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH AILSVATWPWLFLVNIPVGLLALTVASRTLPVTPASGRPFDLVSAVLNALTFGLLIIGID HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEECC GLGDPEARGVAIVELAAALVVGAVFVRRQIRLPAPLLPVDLLRIPAFALSMATSVASFCA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QMVSYVALPFYFQDVLHLSSTQTGFLLTPWPIAVAAMAPISGRLADRYPPGILGGIGLAM HHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHH MAAGLVSVTLLPAVPAILDIVWRLTLCGLGFGLFQSPNNKVIVTSAPRERAGGASGMQST HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEECCCHHHCCCCCCHHHH ARLTGQSLGAALVAVIFGLTHGLGAERAVTISLSCAVALSVIGGCASVLRRSRSG HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AQVPHGPTGGAPGSPQPPPQAPVQDGLPPRERVLAMAAIGLAMTMAVLDGAIVNVALPV CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAKDLSVRPADAIFVVNAYQVAVTASLLPFAALGDIFGFRKVYLPGLAVFVAASLACAVA HHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PNLPLLIAARIVQGLGGAAIMSVNIGFVRFIYPHRMIGQGVANVALVVAVASAAGPTVAA CCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH AILSVATWPWLFLVNIPVGLLALTVASRTLPVTPASGRPFDLVSAVLNALTFGLLIIGID HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEECC GLGDPEARGVAIVELAAALVVGAVFVRRQIRLPAPLLPVDLLRIPAFALSMATSVASFCA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QMVSYVALPFYFQDVLHLSSTQTGFLLTPWPIAVAAMAPISGRLADRYPPGILGGIGLAM HHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHH MAAGLVSVTLLPAVPAILDIVWRLTLCGLGFGLFQSPNNKVIVTSAPRERAGGASGMQST HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEECCCHHHCCCCCCHHHH ARLTGQSLGAALVAVIFGLTHGLGAERAVTISLSCAVALSVIGGCASVLRRSRSG HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]