| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is luxQ [H]
Identifier: 170749919
GI number: 170749919
Start: 3733007
End: 3734353
Strand: Direct
Name: luxQ [H]
Synonym: Mrad2831_3519
Alternate gene names: 170749919
Gene position: 3733007-3734353 (Clockwise)
Preceding gene: 170749918
Following gene: 170749920
Centisome position: 61.42
GC content: 71.86
Gene sequence:
>1347_bases GTGACCCTGCACCCGAACGGCCTCGAGACCGACGCGTCCCTGCACCGGCGGATCGAGAAGCTCGAGCGCATCAACGCCGC GCTGATGTCCCATGTCGAGCGCTCCATGGATCAGCGGGGCAGCGCCTACTCGCTGTTCCAGACGGCGATCATGCTCGAGG GCCGGGTCCGCACCCGCACCGAGGAGCTGACCGGGCTCATGCACCGGCTGGAGCGCTCCAACGAGGCGCTGGCCGCGGCC AAGGAGGAGGCCGAGACCGCCAACCGCTCGAAGACGCGGTTCCTGGCGGCGGCGAGCCACGACCTGCTGCAGCCGGTCAA TGCCGCCCGCCTGTCGATCTCGGCGCTCGCCGACCTCGAGGTCCCGCCGGAAGCGCGTGCCATCGCCGGACAGGTGGAGC GGGGCCTGCAGACCATCGAGGACCTGATCAAGACGCTGCTCGACATCTCGAAACTCGATGCCGGGGTCGTTCGACCGCAG GTCCAGCCCGTCTTCCTGCCCGACCTGCTGGCGGAGCTCGCGGAGAGCTTCAAACCCTTCGCGCAGCGCAAGGGTCTGCG CCTGTCGGTGCACTGTCCGGAGGTCACCGTCACCAGCGACGTGGTGCTCCTGCAGCGGATCCTCCAGAACCTCGTCTCCA ACGCCGTCCGGTACACCCGCACCGGCGGGATCGTCCTGGCGGCCCGGCGCCGGTCCGGCGCTGTCCGGATCGAAGTGACC GACACGGGCTGCGGCATCGCCGCCGAGGAATGCGACCTCGTCTTCGACGAGTTCTTCCGGGGCGGCGACCGGACCGGCAG CGGCGAGGAGCCGGGCCTCGGCCTCGGCCTTTCGATCGTCCGCCGCATGGCCCTGGCCCTCGACCATCCCCTGCGGCTGC GCTCCCGGGTCGGCCACGGCACCCGGGTCGCGCTGACGCTGCCCCTGAGCGCGGTCCCGGCCGCGGCCGCGCCGCCCGCC CCGGTGGCGACCCGGCTCTCGGGAGCGCACGTCCTCGTCGTGGAGAACGACGCCTCGACGGCCGACGCCCTCGCGCGCCT CCTCCAGAACTGGGATGCCCGGGTCTCGACCTTCCGCGACCTCGCGGGGGTGAAGGCCTCCGTCGAGGCGGGCGCCGGGG CGCCGGACATCCTGGTGCTCGACTATCATCTCGACGAGGGCGCCTGCGGCCTCGACGTGGCCGCCTATCTCCGCGCGCTG CGGGCCGAGCCGCTCCCGGTCATCGTCACCACCGCCGACCATTCCAGCGCGGTCGAGGATCGCGTCACAGCCGCCGGAGC GGAACTCGTGCACAAGCCGATCAAGCCGGCCCAGCTCCGCTCCCTGCTGACCTACATGCTGGCTTGA
Upstream 100 bases:
>100_bases AGTACCGGGCGATGCACCTGAACCAGACCTTCACGGGCATCGCCATCGGCAAGACCCTCGCCGCGGGCGCGCCGGCCGCG GCCGCCGCCCCGGTCGCGTC
Downstream 100 bases:
>100_bases TCCCGGTCGGGACCCGCGACGCTCCGGGTCGCGCCCGGCGCGCGCCGCGCGCTCCCGAACCGATCGAGCGCCCGGGCCGC GCGGCGTGCTGCCGACGGCG
Product: histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MTLHPNGLETDASLHRRIEKLERINAALMSHVERSMDQRGSAYSLFQTAIMLEGRVRTRTEELTGLMHRLERSNEALAAA KEEAETANRSKTRFLAAASHDLLQPVNAARLSISALADLEVPPEARAIAGQVERGLQTIEDLIKTLLDISKLDAGVVRPQ VQPVFLPDLLAELAESFKPFAQRKGLRLSVHCPEVTVTSDVVLLQRILQNLVSNAVRYTRTGGIVLAARRRSGAVRIEVT DTGCGIAAEECDLVFDEFFRGGDRTGSGEEPGLGLGLSIVRRMALALDHPLRLRSRVGHGTRVALTLPLSAVPAAAAPPA PVATRLSGAHVLVVENDASTADALARLLQNWDARVSTFRDLAGVKASVEAGAGAPDILVLDYHLDEGACGLDVAAYLRAL RAEPLPVIVTTADHSSAVEDRVTAAGAELVHKPIKPAQLRSLLTYMLA
Sequences:
>Translated_448_residues MTLHPNGLETDASLHRRIEKLERINAALMSHVERSMDQRGSAYSLFQTAIMLEGRVRTRTEELTGLMHRLERSNEALAAA KEEAETANRSKTRFLAAASHDLLQPVNAARLSISALADLEVPPEARAIAGQVERGLQTIEDLIKTLLDISKLDAGVVRPQ VQPVFLPDLLAELAESFKPFAQRKGLRLSVHCPEVTVTSDVVLLQRILQNLVSNAVRYTRTGGIVLAARRRSGAVRIEVT DTGCGIAAEECDLVFDEFFRGGDRTGSGEEPGLGLGLSIVRRMALALDHPLRLRSRVGHGTRVALTLPLSAVPAAAAPPA PVATRLSGAHVLVVENDASTADALARLLQNWDARVSTFRDLAGVKASVEAGAGAPDILVLDYHLDEGACGLDVAAYLRAL RAEPLPVIVTTADHSSAVEDRVTAAGAELVHKPIKPAQLRSLLTYMLA >Mature_447_residues TLHPNGLETDASLHRRIEKLERINAALMSHVERSMDQRGSAYSLFQTAIMLEGRVRTRTEELTGLMHRLERSNEALAAAK EEAETANRSKTRFLAAASHDLLQPVNAARLSISALADLEVPPEARAIAGQVERGLQTIEDLIKTLLDISKLDAGVVRPQV QPVFLPDLLAELAESFKPFAQRKGLRLSVHCPEVTVTSDVVLLQRILQNLVSNAVRYTRTGGIVLAARRRSGAVRIEVTD TGCGIAAEECDLVFDEFFRGGDRTGSGEEPGLGLGLSIVRRMALALDHPLRLRSRVGHGTRVALTLPLSAVPAAAAPPAP VATRLSGAHVLVVENDASTADALARLLQNWDARVSTFRDLAGVKASVEAGAGAPDILVLDYHLDEGACGLDVAAYLRALR AEPLPVIVTTADHSSAVEDRVTAAGAELVHKPIKPAQLRSLLTYMLA
Specific function: At low cell density, in absence of autoinducer has a kinase activity, and autophosphorylates on a histidine residue. The phosphoryl group is then transferred to an aspartate residue in the response regulator domain. The phosphoryl group is transferred to
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI48994928, Length=373, Percent_Identity=27.3458445040214, Blast_Score=111, Evalue=8e-26, Organism=Escherichia coli, GI145693157, Length=378, Percent_Identity=27.2486772486773, Blast_Score=111, Evalue=1e-25, Organism=Escherichia coli, GI1789149, Length=310, Percent_Identity=28.3870967741935, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1788713, Length=391, Percent_Identity=26.3427109974425, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI87081816, Length=336, Percent_Identity=28.8690476190476, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI1788393, Length=219, Percent_Identity=30.5936073059361, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI87082128, Length=224, Percent_Identity=29.0178571428571, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1786783, Length=230, Percent_Identity=27.8260869565217, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1786912, Length=244, Percent_Identity=27.8688524590164, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1786600, Length=221, Percent_Identity=27.6018099547511, Blast_Score=69, Evalue=9e-13, Organism=Escherichia coli, GI1788279, Length=197, Percent_Identity=25.3807106598985, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR015387 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 - ProDom: PD142495 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF09308 LuxQ-periplasm; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 48153; Mature: 48022
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLHPNGLETDASLHRRIEKLERINAALMSHVERSMDQRGSAYSLFQTAIMLEGRVRTRT CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHH EELTGLMHRLERSNEALAAAKEEAETANRSKTRFLAAASHDLLQPVNAARLSISALADLE HHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC VPPEARAIAGQVERGLQTIEDLIKTLLDISKLDAGVVRPQVQPVFLPDLLAELAESFKPF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH AQRKGLRLSVHCPEVTVTSDVVLLQRILQNLVSNAVRYTRTGGIVLAARRRSGAVRIEVT HHCCCCEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCEEEEEEE DTGCGIAAEECDLVFDEFFRGGDRTGSGEEPGLGLGLSIVRRMALALDHPLRLRSRVGHG CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCC TRVALTLPLSAVPAAAAPPAPVATRLSGAHVLVVENDASTADALARLLQNWDARVSTFRD CEEEEEECHHHCCCCCCCCCCHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH LAGVKASVEAGAGAPDILVLDYHLDEGACGLDVAAYLRALRAEPLPVIVTTADHSSAVED HHCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHH RVTAAGAELVHKPIKPAQLRSLLTYMLA HHHHHHHHHHHCCCCHHHHHHHHHHHHC >Mature Secondary Structure TLHPNGLETDASLHRRIEKLERINAALMSHVERSMDQRGSAYSLFQTAIMLEGRVRTRT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHH EELTGLMHRLERSNEALAAAKEEAETANRSKTRFLAAASHDLLQPVNAARLSISALADLE HHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC VPPEARAIAGQVERGLQTIEDLIKTLLDISKLDAGVVRPQVQPVFLPDLLAELAESFKPF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH AQRKGLRLSVHCPEVTVTSDVVLLQRILQNLVSNAVRYTRTGGIVLAARRRSGAVRIEVT HHCCCCEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCEEEEEEE DTGCGIAAEECDLVFDEFFRGGDRTGSGEEPGLGLGLSIVRRMALALDHPLRLRSRVGHG CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCC TRVALTLPLSAVPAAAAPPAPVATRLSGAHVLVVENDASTADALARLLQNWDARVSTFRD CEEEEEECHHHCCCCCCCCCCHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH LAGVKASVEAGAGAPDILVLDYHLDEGACGLDVAAYLRALRAEPLPVIVTTADHSSAVED HHCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHH RVTAAGAELVHKPIKPAQLRSLLTYMLA HHHHHHHHHHHCCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]