| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is hemA [H]
Identifier: 170749908
GI number: 170749908
Start: 3722785
End: 3724080
Strand: Reverse
Name: hemA [H]
Synonym: Mrad2831_3508
Alternate gene names: 170749908
Gene position: 3724080-3722785 (Counterclockwise)
Preceding gene: 170749910
Following gene: 170749907
Centisome position: 61.27
GC content: 70.83
Gene sequence:
>1296_bases ATGACCGTCACCCGGATGCCCAGCACGATGCTCGCCCAAGCGGGATCGACGCGCGCCGGATCCGGCTACGAGCGCTACTT CCGCGGGGCCCTGGATCAGCTGCACGGCGAGCGGCGCTACCGGGTCTTCGCCGACATCGAGCGGATTTCGGGCCGTTTCC CGACGGCCAAGTGGCGCCAGCCCGAGGGCAAGACCACCGAGATCACGGTGTGGTGCTCCAACGACTACCTCGGCATGGGC CAGCACAAGGAGGTCGTGGCGGCCATGACCGAGACCGCCGCCCGCTGCGGCGTCGGCGCCGGCGGCACCCGCAACATCGC CGGCAACACCTCGCCGCTGGTCGATCTGGAGCGCGAGCTCGCCGACCTGCACGGCAAGGAGGCCGGCCTCGTCTTCACCT CCGGCTACGTCTCGAACCAGGCCGGCATCTCGACCATCGCCAAGCTGATCCCCGACTGCCTGATCCTGTCGGACGCCTTC AACCACAACTCGATGATCGAGGGCGTGCGCCATTCCGGCTGCGCGAAGAAGATCTTCCGCCACAACGATCTCCAGCACCT GGAGGAGCTGCTCCGGGAGGCCGGCGACCGGCCCAAGCTGATCGTGTTCGAGTCGGTCTACTCGATGGACGGCGACGTGG CGCCGATCGGCGAGATCTGCGACCTCGCCGACCGCTACGGGGCGATGACCTACCTCGACGAGGTCCACGCCGTCGGCCTC TACGGCCCGCGCGGCGGCGGCATCGCCGAGCGCGACGGCGTCATGCACCGGGTCGACGTGATCGAGGGGACGCTGGCCAA GGGCTTCGGCTGCGTGGGCGGCTACATCACGGCTTCGGCGGCGATCTGCGACGCGGTGCGCAGCTTCGCGCCGGGCTTCA TATTCACGACGGCGCTGCCGCCTGCCGTGGCGGCGGCGGCGCGGGCGTCGGTGCGGTATCTCAAGCGCTCGGGCGCGGAG CGGGAGGCGCACCAGCGCCAGGCGGCGGCCACCAAGGCGGCGCTGCGCGCGGCGGGCCTGCCGGTCCTGGAGACGGAGAC GCACATCGTGCCGGTGATGGTGGGCGATGCCGAGCTGTGCAAGGCGGCGGCCGACCATCTTCTGGAGCACCACGCGATCT ACATCCAGCCGATCAACTACCCGACGGTGCCGCGCGGGACCGAGCGCCTGCGGATCACGCCGTCGCCCTTCCACGACGCG GCGCATATCGAGCGCCTGGCTGCGGCGCTGACGGAGACCTGGGAGGCGCTGGACCTGCCCCGCGCCGGCACGGTGTTCGT CGAGGCGGCGGAGTAG
Upstream 100 bases:
>100_bases CCTCACGCGAAGGACTGGACCGAGGCCGGACCTCGATCGCGGGCCTGAGATGCCGCCTCGGCGGTGTCGCCCGCGCGGCC GAATACGCGAAGGACGCTCG
Downstream 100 bases:
>100_bases GATCCGCGCCGCCTCTCCCCGAGAGGCGGTGCTGCGGGCGCCCGCTTCCGCGAAGGGGGCGAAGCAACCCGGGGGGCCCG TTCACCGACGGCCTGCTGCC
Product: 5-aminolevulinate synthase
Products: NA
Alternate protein names: 5-aminolevulinic acid synthase; Delta-ALA synthase; Delta-aminolevulinate synthase [H]
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MTVTRMPSTMLAQAGSTRAGSGYERYFRGALDQLHGERRYRVFADIERISGRFPTAKWRQPEGKTTEITVWCSNDYLGMG QHKEVVAAMTETAARCGVGAGGTRNIAGNTSPLVDLERELADLHGKEAGLVFTSGYVSNQAGISTIAKLIPDCLILSDAF NHNSMIEGVRHSGCAKKIFRHNDLQHLEELLREAGDRPKLIVFESVYSMDGDVAPIGEICDLADRYGAMTYLDEVHAVGL YGPRGGGIAERDGVMHRVDVIEGTLAKGFGCVGGYITASAAICDAVRSFAPGFIFTTALPPAVAAAARASVRYLKRSGAE REAHQRQAAATKAALRAAGLPVLETETHIVPVMVGDAELCKAAADHLLEHHAIYIQPINYPTVPRGTERLRITPSPFHDA AHIERLAAALTETWEALDLPRAGTVFVEAAE
Sequences:
>Translated_431_residues MTVTRMPSTMLAQAGSTRAGSGYERYFRGALDQLHGERRYRVFADIERISGRFPTAKWRQPEGKTTEITVWCSNDYLGMG QHKEVVAAMTETAARCGVGAGGTRNIAGNTSPLVDLERELADLHGKEAGLVFTSGYVSNQAGISTIAKLIPDCLILSDAF NHNSMIEGVRHSGCAKKIFRHNDLQHLEELLREAGDRPKLIVFESVYSMDGDVAPIGEICDLADRYGAMTYLDEVHAVGL YGPRGGGIAERDGVMHRVDVIEGTLAKGFGCVGGYITASAAICDAVRSFAPGFIFTTALPPAVAAAARASVRYLKRSGAE REAHQRQAAATKAALRAAGLPVLETETHIVPVMVGDAELCKAAADHLLEHHAIYIQPINYPTVPRGTERLRITPSPFHDA AHIERLAAALTETWEALDLPRAGTVFVEAAE >Mature_430_residues TVTRMPSTMLAQAGSTRAGSGYERYFRGALDQLHGERRYRVFADIERISGRFPTAKWRQPEGKTTEITVWCSNDYLGMGQ HKEVVAAMTETAARCGVGAGGTRNIAGNTSPLVDLERELADLHGKEAGLVFTSGYVSNQAGISTIAKLIPDCLILSDAFN HNSMIEGVRHSGCAKKIFRHNDLQHLEELLREAGDRPKLIVFESVYSMDGDVAPIGEICDLADRYGAMTYLDEVHAVGLY GPRGGGIAERDGVMHRVDVIEGTLAKGFGCVGGYITASAAICDAVRSFAPGFIFTTALPPAVAAAARASVRYLKRSGAER EAHQRQAAATKAALRAAGLPVLETETHIVPVMVGDAELCKAAADHLLEHHAIYIQPINYPTVPRGTERLRITPSPFHDAA HIERLAAALTETWEALDLPRAGTVFVEAAE
Specific function: Unknown
COG id: COG0156
COG function: function code H; 7-keto-8-aminopelargonate synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI83977442, Length=402, Percent_Identity=49.2537313432836, Blast_Score=417, Evalue=1e-117, Organism=Homo sapiens, GI83977440, Length=402, Percent_Identity=49.2537313432836, Blast_Score=417, Evalue=1e-116, Organism=Homo sapiens, GI83977444, Length=402, Percent_Identity=49.2537313432836, Blast_Score=416, Evalue=1e-116, Organism=Homo sapiens, GI4502025, Length=401, Percent_Identity=49.8753117206983, Blast_Score=391, Evalue=1e-109, Organism=Homo sapiens, GI40316939, Length=401, Percent_Identity=49.8753117206983, Blast_Score=391, Evalue=1e-109, Organism=Homo sapiens, GI284448556, Length=351, Percent_Identity=36.4672364672365, Blast_Score=219, Evalue=5e-57, Organism=Homo sapiens, GI7657118, Length=354, Percent_Identity=36.1581920903955, Blast_Score=218, Evalue=6e-57, Organism=Homo sapiens, GI119220554, Length=397, Percent_Identity=28.9672544080605, Blast_Score=159, Evalue=3e-39, Organism=Homo sapiens, GI4758668, Length=369, Percent_Identity=31.7073170731707, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI5454084, Length=253, Percent_Identity=26.8774703557312, Blast_Score=100, Evalue=2e-21, Organism=Escherichia coli, GI1790046, Length=359, Percent_Identity=34.8189415041783, Blast_Score=196, Evalue=2e-51, Organism=Escherichia coli, GI1786993, Length=342, Percent_Identity=33.3333333333333, Blast_Score=160, Evalue=2e-40, Organism=Caenorhabditis elegans, GI71994529, Length=418, Percent_Identity=33.4928229665072, Blast_Score=211, Evalue=8e-55, Organism=Caenorhabditis elegans, GI32566772, Length=391, Percent_Identity=30.1790281329923, Blast_Score=152, Evalue=4e-37, Organism=Caenorhabditis elegans, GI17560914, Length=368, Percent_Identity=28.2608695652174, Blast_Score=142, Evalue=5e-34, Organism=Caenorhabditis elegans, GI17560912, Length=368, Percent_Identity=28.2608695652174, Blast_Score=142, Evalue=5e-34, Organism=Caenorhabditis elegans, GI71982617, Length=251, Percent_Identity=27.4900398406374, Blast_Score=108, Evalue=4e-24, Organism=Caenorhabditis elegans, GI71982625, Length=251, Percent_Identity=27.4900398406374, Blast_Score=108, Evalue=6e-24, Organism=Saccharomyces cerevisiae, GI6320438, Length=429, Percent_Identity=48.4848484848485, Blast_Score=404, Evalue=1e-113, Organism=Saccharomyces cerevisiae, GI6320267, Length=366, Percent_Identity=30.327868852459, Blast_Score=146, Evalue=7e-36, Organism=Saccharomyces cerevisiae, GI6323954, Length=285, Percent_Identity=24.5614035087719, Blast_Score=94, Evalue=4e-20, Organism=Drosophila melanogaster, GI17137420, Length=402, Percent_Identity=47.0149253731343, Blast_Score=379, Evalue=1e-105, Organism=Drosophila melanogaster, GI24662918, Length=361, Percent_Identity=35.1800554016621, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI17136286, Length=377, Percent_Identity=28.1167108753316, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI24653280, Length=290, Percent_Identity=27.2413793103448, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI24653276, Length=290, Percent_Identity=27.2413793103448, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI24653278, Length=290, Percent_Identity=27.2413793103448, Blast_Score=107, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010961 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.3.1.37 [H]
Molecular weight: Translated: 46493; Mature: 46362
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVTRMPSTMLAQAGSTRAGSGYERYFRGALDQLHGERRYRVFADIERISGRFPTAKWRQ CCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCC PEGKTTEITVWCSNDYLGMGQHKEVVAAMTETAARCGVGAGGTRNIAGNTSPLVDLEREL CCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH ADLHGKEAGLVFTSGYVSNQAGISTIAKLIPDCLILSDAFNHNSMIEGVRHSGCAKKIFR HHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH HNDLQHLEELLREAGDRPKLIVFESVYSMDGDVAPIGEICDLADRYGAMTYLDEVHAVGL CCCHHHHHHHHHHCCCCCCEEEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEE YGPRGGGIAERDGVMHRVDVIEGTLAKGFGCVGGYITASAAICDAVRSFAPGFIFTTALP ECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCC PAVAAAARASVRYLKRSGAEREAHQRQAAATKAALRAAGLPVLETETHIVPVMVGDAELC HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEECCHHHH KAAADHLLEHHAIYIQPINYPTVPRGTERLRITPSPFHDAAHIERLAAALTETWEALDLP HHHHHHHHHCCEEEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC RAGTVFVEAAE CCCEEEEEECC >Mature Secondary Structure TVTRMPSTMLAQAGSTRAGSGYERYFRGALDQLHGERRYRVFADIERISGRFPTAKWRQ CCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCC PEGKTTEITVWCSNDYLGMGQHKEVVAAMTETAARCGVGAGGTRNIAGNTSPLVDLEREL CCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH ADLHGKEAGLVFTSGYVSNQAGISTIAKLIPDCLILSDAFNHNSMIEGVRHSGCAKKIFR HHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH HNDLQHLEELLREAGDRPKLIVFESVYSMDGDVAPIGEICDLADRYGAMTYLDEVHAVGL CCCHHHHHHHHHHCCCCCCEEEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEE YGPRGGGIAERDGVMHRVDVIEGTLAKGFGCVGGYITASAAICDAVRSFAPGFIFTTALP ECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCC PAVAAAARASVRYLKRSGAEREAHQRQAAATKAALRAAGLPVLETETHIVPVMVGDAELC HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEECCHHHH KAAADHLLEHHAIYIQPINYPTVPRGTERLRITPSPFHDAAHIERLAAALTETWEALDLP HHHHHHHHHCCEEEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC RAGTVFVEAAE CCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3609750; 12597275 [H]