Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

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The map label for this gene is cdsA [H]

Identifier: 170749845

GI number: 170749845

Start: 3661791

End: 3662648

Strand: Reverse

Name: cdsA [H]

Synonym: Mrad2831_3445

Alternate gene names: 170749845

Gene position: 3662648-3661791 (Counterclockwise)

Preceding gene: 170749846

Following gene: 170749844

Centisome position: 60.26

GC content: 76.22

Gene sequence:

>858_bases
GTGACCTCCGCCGCCGCACCGGCCGCGCGTCCCTCGGGGCGGCGCGAGCTGTGGCTGCGCGTCGCCTCGGGCCTCGTGCT
CGGGGCCGGCGTGCTGGCCGCGCTCGTCTATGGCGGCTGGCCCTTCGCGGGGATCTGGCTCGCCGCCGGCATCGTCGGCT
TCGCCGAGTGGATGGTGATGAGCCGCACGGAGCCCCGCGAGGTGCTGATCGCGCTGGGCGCGGCGACGCTCGGCGCCCTG
CTGCTCTGCCAGCGCGGCGGCGCCCCGACGCCGGCCTGCCTCGCGGTCCTGCTGCTCGGCGCCGCGGCCTGCGCCACGGT
GGCGCGGACCGGCCGAGGCCGGCTCCGCGCCTTCCTCGGGGTGCTCGGCGCGGCGGCGATCGCGGCGGTGCCGGTGGCCC
TGCGCGACGATCCCGCCATCGGCCTCGTCGGGCCGGCCTGGATGTTCGCGGTGGTCTGGTCCACCGACATCGCGGCCTAC
TTCGCCGGTCGGAAGATCGGCGGCCCCAAGCTGATGCCGCGGGTCTCACCCAACAAGACGTGGTCGGGCGCCCTCGGCGG
CCTCGTCGGCGCGGTCGCCGCCGGGACGCTGGTCCCGGTGGTCGCCGACCTCGCCGGCACGACCCTGCCCAGCGCCGCCT
CCCTCCCGGTGGTGGCGGGCGTGAGCGCGCTGGCCTCGGTCCTGAGTCAGGCGGGCGACCTGATCGAATCCGGCCTGAAG
CGCCGCTACGGCGTCAAGGATTCGGGGAAGATCATCCCCGGCCACGGCGGCGTCATGGACAGGCTCGACGGATTCTTCGC
GGTCGCCGTGCTGGCGGCCGTCTATCTCGCCCTGCGCGGCGGCGGTCTGATCCCGTGA

Upstream 100 bases:

>100_bases
GTTCAGAAGGCGACCGACCAGTACATCGCCGAGATCGACGGCGTGCTGGCCTCCAAGGAGAAGGAGATCATGCAGGTCTG
AGGCGCGGGACGGGACGCGC

Downstream 100 bases:

>100_bases
CGATGAGGGAGTTGAACCCGTGACCCAGGTCGTCACCGTCTTCGGCGCCACCGGCTCGATCGGCCGCTCCACCGCCGACC
TCCTGGCCCAGCACGCCGAC

Product: phosphatidate cytidylyltransferase

Products: NA

Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MTSAAAPAARPSGRRELWLRVASGLVLGAGVLAALVYGGWPFAGIWLAAGIVGFAEWMVMSRTEPREVLIALGAATLGAL
LLCQRGGAPTPACLAVLLLGAAACATVARTGRGRLRAFLGVLGAAAIAAVPVALRDDPAIGLVGPAWMFAVVWSTDIAAY
FAGRKIGGPKLMPRVSPNKTWSGALGGLVGAVAAGTLVPVVADLAGTTLPSAASLPVVAGVSALASVLSQAGDLIESGLK
RRYGVKDSGKIIPGHGGVMDRLDGFFAVAVLAAVYLALRGGGLIP

Sequences:

>Translated_285_residues
MTSAAAPAARPSGRRELWLRVASGLVLGAGVLAALVYGGWPFAGIWLAAGIVGFAEWMVMSRTEPREVLIALGAATLGAL
LLCQRGGAPTPACLAVLLLGAAACATVARTGRGRLRAFLGVLGAAAIAAVPVALRDDPAIGLVGPAWMFAVVWSTDIAAY
FAGRKIGGPKLMPRVSPNKTWSGALGGLVGAVAAGTLVPVVADLAGTTLPSAASLPVVAGVSALASVLSQAGDLIESGLK
RRYGVKDSGKIIPGHGGVMDRLDGFFAVAVLAAVYLALRGGGLIP
>Mature_284_residues
TSAAAPAARPSGRRELWLRVASGLVLGAGVLAALVYGGWPFAGIWLAAGIVGFAEWMVMSRTEPREVLIALGAATLGALL
LCQRGGAPTPACLAVLLLGAAACATVARTGRGRLRAFLGVLGAAAIAAVPVALRDDPAIGLVGPAWMFAVVWSTDIAAYF
AGRKIGGPKLMPRVSPNKTWSGALGGLVGAVAAGTLVPVVADLAGTTLPSAASLPVVAGVSALASVLSQAGDLIESGLKR
RYGVKDSGKIIPGHGGVMDRLDGFFAVAVLAAVYLALRGGGLIP

Specific function: Phospholipid biosynthesis. [C]

COG id: COG0575

COG function: function code I; CDP-diglyceride synthetase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDS family [H]

Homologues:

Organism=Escherichia coli, GI87081696, Length=176, Percent_Identity=38.0681818181818, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1787677, Length=117, Percent_Identity=39.3162393162393, Blast_Score=78, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000374 [H]

Pfam domain/function: PF01148 CTP_transf_1 [H]

EC number: =2.7.7.41 [H]

Molecular weight: Translated: 28505; Mature: 28374

Theoretical pI: Translated: 10.86; Mature: 10.86

Prosite motif: PS01315 CDS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TSAAAPAARPSGRRELWLRVASGLVLGAGVLAALVYGGWPFAGIWLAAGIVGFAEWMVM
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
SRTEPREVLIALGAATLGALLLCQRGGAPTPACLAVLLLGAAACATVARTGRGRLRAFLG
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
VLGAAAIAAVPVALRDDPAIGLVGPAWMFAVVWSTDIAAYFAGRKIGGPKLMPRVSPNKT
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
WSGALGGLVGAVAAGTLVPVVADLAGTTLPSAASLPVVAGVSALASVLSQAGDLIESGLK
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RRYGVKDSGKIIPGHGGVMDRLDGFFAVAVLAAVYLALRGGGLIP
HHCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA