| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170749814
Identifier: 170749814
GI number: 170749814
Start: 3624888
End: 3625718
Strand: Direct
Name: 170749814
Synonym: Mrad2831_3413
Alternate gene names: NA
Gene position: 3624888-3625718 (Clockwise)
Preceding gene: 170749813
Following gene: 170749815
Centisome position: 59.64
GC content: 72.44
Gene sequence:
>831_bases ATGAGTGCCGAGACCGTCCCGTCCAAACCCGTCCTCCTGACCGGGGCCTCCGGCGCCCTCGGGCGCGTGCTGACCCGCGC GCTCGGCGCGCAGGGCTGGACGCTCCGGCTCACGGACCGCGTCCCCTTCCCCGATCCGCTACCCGAGGGGGCCCGGTTCC AGGTCGCCGACCTGGAGGACGGGCCGGCGATCCTGCGGCTGGCGGAGGGCTGCGGCACGATCCTCCATTTCGGGGGGATC TCCGTGGAGCACCCGTTCGAGACGGTGATCGGCCCGAACATCCGCGGCCTCTACCACGCCTACGAGGCGGCCCGGCGCGA GGGTGCCCGGATGATCTTCGCCTCCTCGAACCACGCGATCGGCTTCCACGCGCGCTCGGAGGTGCTGGACGACGATTGCG GCCTCGCACCCGACGGCTATTACGGCCTGTCCAAGGCCTACGGCGAGCTGATGGGCGGCCTCTACCGCGACAAGCACGGG GTCGAGAGCGTCTTCCTGCGGATCGGGTCGTGCTTCCCGGAGCCGACCGACGCGCGGATGCTGGCCACGTGGCTGTCCTA CGCCGACCTGACCCGGCTGATCACCCGCGCCACCCTGGCCCCGGACCTCGGCCCGACGGGCTCGGTGGTGATCTGGGGCG CGTCGAACAACAGCCGCATGACCTGGTGGCGGAAGGACGGGCGCGCCGTCATCGGCTGGGCGCCGCAGGACAGCGCCGAT TCCCACGCGGCGGCGCTGGAGGGGAAGACCAGCGGCAACCCGGTGGTGGAGCGCTACCAGGGCGGCGGCTTCACGGCGAT CGACTATTCCCGCGCCGAGCCGCCGCGGTGA
Upstream 100 bases:
>100_bases CCGGCGGAAGCCGGTCCCCTCACCGCGGCCAAGGCCGTCTGACCGAGGCCGTCTGATCAAGGCTGCCCGACCAGGCCGCC GGAATCTGGAGCAGCGTCCC
Downstream 100 bases:
>100_bases CGGTCCGGCTTCTCGGCGCGCGGACCATCGCCCACTCAGCCTGAGGCGGCCGCGCAGCGACGCCCGAGGGCGGGCCAGCC GAGCCGACGTGACCCGGCGG
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; NAD Dependent Epimerase/Dehydratase Family Protein; TDP-Glucose-4 6-Dehydratase-Related Protein; Sugar Epimerase/Dehydratase-Like Protein; DTDP-Glucose 4 6-Dehydratase; Oxidoreductase Protein; UDP-Glucose 4-Epimerase Protein; UDP Glucose Epimerase; Epimerase; Sugar Epimerase/Dehydratase Homolog; Nucleoside-Diphosphate-Sugar Epimerases; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Dehydratase/Epimerase; Epimerase/Dehydratase; UDP-Glucose 4-Epimerase; Nucleoside-Diphosphate-Sugar Epimerase; Short Chain Dehydrogenase Family Protein; NDP-Sugar Epimerase; NAD-Dependent Epimerase/Dehydratase Family Protein; Nucleoside-Diphosphate-Sugar Epimerase Dehydratase Protein; NAD Dependent Epimerase/Dehydratase
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MSAETVPSKPVLLTGASGALGRVLTRALGAQGWTLRLTDRVPFPDPLPEGARFQVADLEDGPAILRLAEGCGTILHFGGI SVEHPFETVIGPNIRGLYHAYEAARREGARMIFASSNHAIGFHARSEVLDDDCGLAPDGYYGLSKAYGELMGGLYRDKHG VESVFLRIGSCFPEPTDARMLATWLSYADLTRLITRATLAPDLGPTGSVVIWGASNNSRMTWWRKDGRAVIGWAPQDSAD SHAAALEGKTSGNPVVERYQGGGFTAIDYSRAEPPR
Sequences:
>Translated_276_residues MSAETVPSKPVLLTGASGALGRVLTRALGAQGWTLRLTDRVPFPDPLPEGARFQVADLEDGPAILRLAEGCGTILHFGGI SVEHPFETVIGPNIRGLYHAYEAARREGARMIFASSNHAIGFHARSEVLDDDCGLAPDGYYGLSKAYGELMGGLYRDKHG VESVFLRIGSCFPEPTDARMLATWLSYADLTRLITRATLAPDLGPTGSVVIWGASNNSRMTWWRKDGRAVIGWAPQDSAD SHAAALEGKTSGNPVVERYQGGGFTAIDYSRAEPPR >Mature_275_residues SAETVPSKPVLLTGASGALGRVLTRALGAQGWTLRLTDRVPFPDPLPEGARFQVADLEDGPAILRLAEGCGTILHFGGIS VEHPFETVIGPNIRGLYHAYEAARREGARMIFASSNHAIGFHARSEVLDDDCGLAPDGYYGLSKAYGELMGGLYRDKHGV ESVFLRIGSCFPEPTDARMLATWLSYADLTRLITRATLAPDLGPTGSVVIWGASNNSRMTWWRKDGRAVIGWAPQDSADS HAAALEGKTSGNPVVERYQGGGFTAIDYSRAEPPR
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29670; Mature: 29539
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAETVPSKPVLLTGASGALGRVLTRALGAQGWTLRLTDRVPFPDPLPEGARFQVADLED CCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEECCC GPAILRLAEGCGTILHFGGISVEHPFETVIGPNIRGLYHAYEAARREGARMIFASSNHAI CHHHHHHHHHCCEEEEECCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCEE GFHARSEVLDDDCGLAPDGYYGLSKAYGELMGGLYRDKHGVESVFLRIGSCFPEPTDARM EECHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHH LATWLSYADLTRLITRATLAPDLGPTGSVVIWGASNNSRMTWWRKDGRAVIGWAPQDSAD HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEECCCCEEEEECCCCCCC SHAAALEGKTSGNPVVERYQGGGFTAIDYSRAEPPR CCHHEECCCCCCCHHHEEECCCCEEEEECCCCCCCC >Mature Secondary Structure SAETVPSKPVLLTGASGALGRVLTRALGAQGWTLRLTDRVPFPDPLPEGARFQVADLED CCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEECCC GPAILRLAEGCGTILHFGGISVEHPFETVIGPNIRGLYHAYEAARREGARMIFASSNHAI CHHHHHHHHHCCEEEEECCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCEE GFHARSEVLDDDCGLAPDGYYGLSKAYGELMGGLYRDKHGVESVFLRIGSCFPEPTDARM EECHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHH LATWLSYADLTRLITRATLAPDLGPTGSVVIWGASNNSRMTWWRKDGRAVIGWAPQDSAD HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEECCCCEEEEECCCCCCC SHAAALEGKTSGNPVVERYQGGGFTAIDYSRAEPPR CCHHEECCCCCCCHHHEEECCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA