| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yohJ [C]
Identifier: 170749790
GI number: 170749790
Start: 3599304
End: 3599708
Strand: Reverse
Name: yohJ [C]
Synonym: Mrad2831_3389
Alternate gene names: 170749790
Gene position: 3599708-3599304 (Counterclockwise)
Preceding gene: 170749791
Following gene: 170749789
Centisome position: 59.23
GC content: 73.58
Gene sequence:
>405_bases ATGATCGCCAGTCTGGCCCTGATCCTGCTCGCGCAGCTGCTGGGCGAGGCCCTCGCCCGCGGCGCGGGCGTTCCGATCCC GGGCCCGGTGATCGGCATGGGCCTGATGTTCGCGTTCCTGCTGCTCCGCGACAACGCCCGCCTCGGACTGCCGCGCGTGC TGCCGAAGCCGCTCACCGACGGCACGCTCGAGACGACCGCGCGCGGGCTGCTGATGAACCTGTCGCTCCTGTTCGTTCCC GCGGGCGTCGGCGTCGTCGGCCGCCTCGACCTGCTGCGCGCCCAGGGCGCCAAGCTGGCGCTCGTGCTGGTCGTCTCGAC GGCGCTGTCGCTGCTGGTCACCGTCCTGGTCTTCCGCGCCGTCGCCGCCCTGGTCGAGCGCCGCGGCACCGACGGGGAGT CCTGA
Upstream 100 bases:
>100_bases GCGCCTCGGCCGCCTGCTCGGCTTCGACGAGACCGCCGTCGCGGCGGCCCGGCGCAGCGGACAGCAGGGCGTCGCGGCCG CCTAGCCCCGGCCGCCCGCG
Downstream 100 bases:
>100_bases CGCGTGGGCGGCGACTTCTCGCTCTGGGTCTACCTCGCCAAGACGCCGCTCCTGTGGCTCACCGTGACGCTGACCGCCTA CGTCCTGGCGGACCGGATCG
Product: LrgA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MIASLALILLAQLLGEALARGAGVPIPGPVIGMGLMFAFLLLRDNARLGLPRVLPKPLTDGTLETTARGLLMNLSLLFVP AGVGVVGRLDLLRAQGAKLALVLVVSTALSLLVTVLVFRAVAALVERRGTDGES
Sequences:
>Translated_134_residues MIASLALILLAQLLGEALARGAGVPIPGPVIGMGLMFAFLLLRDNARLGLPRVLPKPLTDGTLETTARGLLMNLSLLFVP AGVGVVGRLDLLRAQGAKLALVLVVSTALSLLVTVLVFRAVAALVERRGTDGES >Mature_134_residues MIASLALILLAQLLGEALARGAGVPIPGPVIGMGLMFAFLLLRDNARLGLPRVLPKPLTDGTLETTARGLLMNLSLLFVP AGVGVVGRLDLLRAQGAKLALVLVVSTALSLLVTVLVFRAVAALVERRGTDGES
Specific function: Unknown
COG id: COG1380
COG function: function code R; Putative effector of murein hydrolase LrgA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13859; Mature: 13859
Theoretical pI: Translated: 11.65; Mature: 11.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIASLALILLAQLLGEALARGAGVPIPGPVIGMGLMFAFLLLRDNARLGLPRVLPKPLTD CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC GTLETTARGLLMNLSLLFVPAGVGVVGRLDLLRAQGAKLALVLVVSTALSLLVTVLVFRA CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH VAALVERRGTDGES HHHHHHHCCCCCCC >Mature Secondary Structure MIASLALILLAQLLGEALARGAGVPIPGPVIGMGLMFAFLLLRDNARLGLPRVLPKPLTD CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC GTLETTARGLLMNLSLLFVPAGVGVVGRLDLLRAQGAKLALVLVVSTALSLLVTVLVFRA CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH VAALVERRGTDGES HHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA