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The map label for this gene is yohK [H]

Identifier: 170749789

GI number: 170749789

Start: 3598584

End: 3599300

Strand: Reverse

Name: yohK [H]

Synonym: Mrad2831_3388

Alternate gene names: 170749789

Gene position: 3599300-3598584 (Counterclockwise)

Preceding gene: 170749790

Following gene: 170749787

Centisome position: 59.22

GC content: 72.25

Gene sequence:

>717_bases
GTGGGCGGCGACTTCTCGCTCTGGGTCTACCTCGCCAAGACGCCGCTCCTGTGGCTCACCGTGACGCTGACCGCCTACGT
CCTGGCGGACCGGATCGCCGCCGCGACCGGCCGGCACCCGATCGCCAACCCCGTCCTCATCACGGTCGTCCTGGTCGGGG
CGGTCCTGGCCATCACCGGCACGCCCTACGGGGCCTATTTCGAGGGCGCGCAGTTCGTCCACTTCCTGCTCGGACCCGCC
ACCGTGGTTCTGGCGATGCCCCTCTACGAGCGGCGGGCGACCGTCCTGCGTGCCCTCGCGCCCATGCTGGCGGCCCTCGC
GGCCGGCTCGGCCACCACCCTCGCCGTGGTGATCGGCCTCGCGCGGCTCCTCGACATCCCGCAGCCGATCCTCGTCTCGC
TGGCGCCGAAATCGGTGACCTCGGGCGTGGCGATGGGCATCGCTGAGGCGCTCGGCGGCGACCCGACGCTCACGGCGATC
CTGGTGATCCTCACCGGCATCATCGGGGCGATCCTCGTGACGCCGATGATGAACCTCCTGCGGATCAGCGACATGCGCGC
CCGCGGCTTCGCGGCCGGGCTCGCGGCCCACGGCATCGGGACGGCCCGCGCCTTCCAGGTCAGCGAGGTCGCCGGCACCT
TCGCGGGCATCGCCATGGGGCTCAACGCCTTCCTGACGGCGGTCCTCGCGCCCCTGGCGCTGCACCTGCTGTTCTGA

Upstream 100 bases:

>100_bases
GGTCGTCTCGACGGCGCTGTCGCTGCTGGTCACCGTCCTGGTCTTCCGCGCCGTCGCCGCCCTGGTCGAGCGCCGCGGCA
CCGACGGGGAGTCCTGACGC

Downstream 100 bases:

>100_bases
GGCTCAGGCGTCCAGCCGGTCGGCCACCGCCTCGGCGAGCGACAGGCTGGAGGTCAGGCCCGGGCTCTCGATCCCGAACA
GGTGCACGAGCCCCGGCAGG

Product: LrgB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MGGDFSLWVYLAKTPLLWLTVTLTAYVLADRIAAATGRHPIANPVLITVVLVGAVLAITGTPYGAYFEGAQFVHFLLGPA
TVVLAMPLYERRATVLRALAPMLAALAAGSATTLAVVIGLARLLDIPQPILVSLAPKSVTSGVAMGIAEALGGDPTLTAI
LVILTGIIGAILVTPMMNLLRISDMRARGFAAGLAAHGIGTARAFQVSEVAGTFAGIAMGLNAFLTAVLAPLALHLLF

Sequences:

>Translated_238_residues
MGGDFSLWVYLAKTPLLWLTVTLTAYVLADRIAAATGRHPIANPVLITVVLVGAVLAITGTPYGAYFEGAQFVHFLLGPA
TVVLAMPLYERRATVLRALAPMLAALAAGSATTLAVVIGLARLLDIPQPILVSLAPKSVTSGVAMGIAEALGGDPTLTAI
LVILTGIIGAILVTPMMNLLRISDMRARGFAAGLAAHGIGTARAFQVSEVAGTFAGIAMGLNAFLTAVLAPLALHLLF
>Mature_237_residues
GGDFSLWVYLAKTPLLWLTVTLTAYVLADRIAAATGRHPIANPVLITVVLVGAVLAITGTPYGAYFEGAQFVHFLLGPAT
VVLAMPLYERRATVLRALAPMLAALAAGSATTLAVVIGLARLLDIPQPILVSLAPKSVTSGVAMGIAEALGGDPTLTAIL
VILTGIIGAILVTPMMNLLRISDMRARGFAAGLAAHGIGTARAFQVSEVAGTFAGIAMGLNAFLTAVLAPLALHLLF

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=217, Percent_Identity=34.5622119815668, Blast_Score=127, Evalue=6e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005261
- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 24434; Mature: 24302

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGDFSLWVYLAKTPLLWLTVTLTAYVLADRIAAATGRHPIANPVLITVVLVGAVLAITG
CCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC
TPYGAYFEGAQFVHFLLGPATVVLAMPLYERRATVLRALAPMLAALAAGSATTLAVVIGL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ARLLDIPQPILVSLAPKSVTSGVAMGIAEALGGDPTLTAILVILTGIIGAILVTPMMNLL
HHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RISDMRARGFAAGLAAHGIGTARAFQVSEVAGTFAGIAMGLNAFLTAVLAPLALHLLF
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GGDFSLWVYLAKTPLLWLTVTLTAYVLADRIAAATGRHPIANPVLITVVLVGAVLAITG
CCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC
TPYGAYFEGAQFVHFLLGPATVVLAMPLYERRATVLRALAPMLAALAAGSATTLAVVIGL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ARLLDIPQPILVSLAPKSVTSGVAMGIAEALGGDPTLTAILVILTGIIGAILVTPMMNLL
HHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RISDMRARGFAAGLAAHGIGTARAFQVSEVAGTFAGIAMGLNAFLTAVLAPLALHLLF
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 2575702 [H]