Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

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The map label for this gene is 170749751

Identifier: 170749751

GI number: 170749751

Start: 3557613

End: 3558428

Strand: Direct

Name: 170749751

Synonym: Mrad2831_3350

Alternate gene names: NA

Gene position: 3557613-3558428 (Clockwise)

Preceding gene: 170749750

Following gene: 170749752

Centisome position: 58.53

GC content: 73.04

Gene sequence:

>816_bases
GTGAGCCAGCACCCGGGCGCCGACGGCGCCGCACCTGTCTTCGCCGACGCGGTGGACGCGCGGCGCGCGATCCGCGCGGG
CCGGTTCCGGGGCCACACCTCGGGTCTCGTCCCCGCCCACGCGCAGGGCAACCTGATGATCCTGCCGCGGGCCATGGCGG
AGGATTTCCACCGCTTCTGCCAGCAGAACCCGAAGCCCTGCCCGATCCTCGGCGTCTCGCGGCCCGGCGCCCGCGCGCTT
CCGACGCTCGGGGCGGACCTCGACCTCGCCACCGACGTCCCCGGCTATCGCGTCTACGAGGGGGGCGAACTCGCGGCGCA
GCTGCCCGACCTGACCGGCGTCTGGCGCGAGGACCTCGTCACCTTCGTCCTCGGCTGCTCCTTCTCGTTCGAGGCCGGCC
TGATCGAGGCGGGCATCCCGCTCCGGCACGTTGCCCTGGGCCGCAACGTCGCGATGTACCGGACGTCGATCGAGACCCAA
CCGTCGGGACCGTTCCACGGCCCCCTGGTGGTCTCTATGCGGCCGATGAAGGCGGCGGACGCCATCAAGGCCGTGCAGGT
GACGGCCCGGATGCCGGCGGTCCACGGGGCGCCGATCCATCTCGGCGACCCGGGCCTGATCGGCATCCGCGACCTCGCGC
GGCCGGATTTCGGCGACCCCGTCCCGATCGAGCCCGACGAGCTCCCGGTCTTCTGGGCCTGCGGGGTCACCCCGCAGGCG
GTGGCGATGGCGGCGCGACTGCCGCTCTGCATCACCCACGCGCCCGGTCACATGCTGATCACCGACCTCCTCAACCGGGA
CCTGCCGTTCCTGTGA

Upstream 100 bases:

>100_bases
CCGCAGGAAATGAATCGCTGAAGCGATCGCGATCTTGCGGAATACGGGCGCCCGGCGAGGGCGGCCCGGCGCACGACGAC
CAGCCGGGGAGATCAACGCG

Downstream 100 bases:

>100_bases
CCCTCCCGGCCGCGTGGCGGCCCGTCCGCGAAGGAGTTGCGCCATGTGGGTGAAAGACACGAGTCCGGCGGAACGCCGGG
TCCTGGGCGCGGCCTTCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MSQHPGADGAAPVFADAVDARRAIRAGRFRGHTSGLVPAHAQGNLMILPRAMAEDFHRFCQQNPKPCPILGVSRPGARAL
PTLGADLDLATDVPGYRVYEGGELAAQLPDLTGVWREDLVTFVLGCSFSFEAGLIEAGIPLRHVALGRNVAMYRTSIETQ
PSGPFHGPLVVSMRPMKAADAIKAVQVTARMPAVHGAPIHLGDPGLIGIRDLARPDFGDPVPIEPDELPVFWACGVTPQA
VAMAARLPLCITHAPGHMLITDLLNRDLPFL

Sequences:

>Translated_271_residues
MSQHPGADGAAPVFADAVDARRAIRAGRFRGHTSGLVPAHAQGNLMILPRAMAEDFHRFCQQNPKPCPILGVSRPGARAL
PTLGADLDLATDVPGYRVYEGGELAAQLPDLTGVWREDLVTFVLGCSFSFEAGLIEAGIPLRHVALGRNVAMYRTSIETQ
PSGPFHGPLVVSMRPMKAADAIKAVQVTARMPAVHGAPIHLGDPGLIGIRDLARPDFGDPVPIEPDELPVFWACGVTPQA
VAMAARLPLCITHAPGHMLITDLLNRDLPFL
>Mature_270_residues
SQHPGADGAAPVFADAVDARRAIRAGRFRGHTSGLVPAHAQGNLMILPRAMAEDFHRFCQQNPKPCPILGVSRPGARALP
TLGADLDLATDVPGYRVYEGGELAAQLPDLTGVWREDLVTFVLGCSFSFEAGLIEAGIPLRHVALGRNVAMYRTSIETQP
SGPFHGPLVVSMRPMKAADAIKAVQVTARMPAVHGAPIHLGDPGLIGIRDLARPDFGDPVPIEPDELPVFWACGVTPQAV
AMAARLPLCITHAPGHMLITDLLNRDLPFL

Specific function: Unknown

COG id: COG4336

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0317 family

Homologues:

Organism=Homo sapiens, GI156139135, Length=240, Percent_Identity=35, Blast_Score=145, Evalue=5e-35,
Organism=Homo sapiens, GI156139133, Length=240, Percent_Identity=34.5833333333333, Blast_Score=137, Evalue=1e-32,
Organism=Homo sapiens, GI156139131, Length=240, Percent_Identity=34.5833333333333, Blast_Score=137, Evalue=1e-32,
Organism=Homo sapiens, GI156139129, Length=240, Percent_Identity=34.5833333333333, Blast_Score=137, Evalue=1e-32,
Organism=Homo sapiens, GI156139137, Length=240, Percent_Identity=32.9166666666667, Blast_Score=115, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3350_METRJ (B1LSM6)

Other databases:

- EMBL:   CP001001
- RefSeq:   YP_001756011.1
- ProteinModelPortal:   B1LSM6
- SMR:   B1LSM6
- GeneID:   6139398
- GenomeReviews:   CP001001_GR
- KEGG:   mrd:Mrad2831_3350
- HOGENOM:   HBG289473
- OMA:   GPMVVSM
- ProtClustDB:   PRK05463
- HAMAP:   MF_01830
- InterPro:   IPR009906
- InterPro:   IPR016938
- PIRSF:   PIRSF029755

Pfam domain/function: PF07286 DUF1445

EC number: NA

Molecular weight: Translated: 28868; Mature: 28737

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQHPGADGAAPVFADAVDARRAIRAGRFRGHTSGLVPAHAQGNLMILPRAMAEDFHRFC
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHH
QQNPKPCPILGVSRPGARALPTLGADLDLATDVPGYRVYEGGELAAQLPDLTGVWREDLV
HCCCCCCCEEECCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCEECCCCCHHHHHHHHH
TFVLGCSFSFEAGLIEAGIPLRHVALGRNVAMYRTSIETQPSGPFHGPLVVSMRPMKAAD
HHHHHCCCCCCCCEEECCCCEEEHHHCCCEEEEEEECCCCCCCCCCCCEEEEECCCHHHH
AIKAVQVTARMPAVHGAPIHLGDPGLIGIRDLARPDFGDPVPIEPDELPVFWACGVTPQA
HHHHHHHHHHCCCCCCCEEEECCCCCEEHHHHCCCCCCCCCCCCCCCCCEEEECCCCHHH
VAMAARLPLCITHAPGHMLITDLLNRDLPFL
HHHHHHCCEEEEECCCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SQHPGADGAAPVFADAVDARRAIRAGRFRGHTSGLVPAHAQGNLMILPRAMAEDFHRFC
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHH
QQNPKPCPILGVSRPGARALPTLGADLDLATDVPGYRVYEGGELAAQLPDLTGVWREDLV
HCCCCCCCEEECCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCEECCCCCHHHHHHHHH
TFVLGCSFSFEAGLIEAGIPLRHVALGRNVAMYRTSIETQPSGPFHGPLVVSMRPMKAAD
HHHHHCCCCCCCCEEECCCCEEEHHHCCCEEEEEEECCCCCCCCCCCCEEEEECCCHHHH
AIKAVQVTARMPAVHGAPIHLGDPGLIGIRDLARPDFGDPVPIEPDELPVFWACGVTPQA
HHHHHHHHHHCCCCCCCEEEECCCCCEEHHHHCCCCCCCCCCCCCCCCCEEEECCCCHHH
VAMAARLPLCITHAPGHMLITDLLNRDLPFL
HHHHHHCCEEEEECCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA