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The map label for this gene is cycM [H]

Identifier: 170749691

GI number: 170749691

Start: 3489605

End: 3490114

Strand: Reverse

Name: cycM [H]

Synonym: Mrad2831_3289

Alternate gene names: 170749691

Gene position: 3490114-3489605 (Counterclockwise)

Preceding gene: 170749692

Following gene: 170749688

Centisome position: 57.42

GC content: 73.14

Gene sequence:

>510_bases
ATGCTGTGCTGTCTTGGGCAGACGCGATCGCGGATCCTGCGCCGTCCCGCGCGCGCCGTGGCGCTCGCGCTGGCCCTGCT
CGCGTCCGCCTGCTCGGACGATGGGCGGGAACGCCGCCGTGCCCTGGGCGAGACGTCGACGTTCGACGACGTCATGCGGG
TGGCCGACGCGGAGCGCGGCGGGCGGCTGTTCGGTCAGTGCGCCGCCTGTCACACGATCAGCCCCGGCGCGGGCGATCGG
AACGGTCCCGGACTCTACGACGTGCTCGGCAAGCCCGTTGCCAGCAACAGCAGGCGCTACGGCTATACCGGGGCGCTGCG
GTCGCTGGGCGGCGTCTGGACCCCGGAGCTTATGGACCTCTGGCTCTCCGCCCCGGCGAAGCTCGCGCCCGGCACCAGCA
TGAGCTTCCGCGGCCTCCCCGATGCCCTCGATCGGGCGGATATCATCGCCTACCTTCTGACGCAGTCGCCCGGGGACGGT
GACGCCGAGCCGCGGCCGGCGCGGCCCTGA

Upstream 100 bases:

>100_bases
TGTCCCTCGATCGTCGGCCGACTCCTGCTGGGGGAGGCGCGCTCCCCGTGGGACGCCCGGCGCGTGCCGATCCGAATCCG
CTCACCGCGAAGGGAACGCG

Downstream 100 bases:

>100_bases
GCCGGTCCTGTCGGCGTCGCTCGTCCGCCCGCACAGGTCGGAAGCGGGGCAGTGCTGCCGGTCAGACGAAATGCGCCGGC
AGGGCCACGTCCTGCGCGTA

Product: cytochrome c class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MLCCLGQTRSRILRRPARAVALALALLASACSDDGRERRRALGETSTFDDVMRVADAERGGRLFGQCAACHTISPGAGDR
NGPGLYDVLGKPVASNSRRYGYTGALRSLGGVWTPELMDLWLSAPAKLAPGTSMSFRGLPDALDRADIIAYLLTQSPGDG
DAEPRPARP

Sequences:

>Translated_169_residues
MLCCLGQTRSRILRRPARAVALALALLASACSDDGRERRRALGETSTFDDVMRVADAERGGRLFGQCAACHTISPGAGDR
NGPGLYDVLGKPVASNSRRYGYTGALRSLGGVWTPELMDLWLSAPAKLAPGTSMSFRGLPDALDRADIIAYLLTQSPGDG
DAEPRPARP
>Mature_169_residues
MLCCLGQTRSRILRRPARAVALALALLASACSDDGRERRRALGETSTFDDVMRVADAERGGRLFGQCAACHTISPGAGDR
NGPGLYDVLGKPVASNSRRYGYTGALRSLGGVWTPELMDLWLSAPAKLAPGTSMSFRGLPDALDRADIIAYLLTQSPGDG
DAEPRPARP

Specific function: May be involved in electron transfer from bc1 complex to aa3 [H]

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

Organism=Homo sapiens, GI11128019, Length=100, Percent_Identity=35, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17539604, Length=102, Percent_Identity=37.2549019607843, Blast_Score=71, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6320796, Length=97, Percent_Identity=36.0824742268041, Blast_Score=70, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6322508, Length=102, Percent_Identity=34.3137254901961, Blast_Score=69, Evalue=3e-13,
Organism=Drosophila melanogaster, GI17137204, Length=106, Percent_Identity=40.5660377358491, Blast_Score=76, Evalue=1e-14,
Organism=Drosophila melanogaster, GI17137228, Length=98, Percent_Identity=37.7551020408163, Blast_Score=74, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 17959; Mature: 17959

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCCLGQTRSRILRRPARAVALALALLASACSDDGRERRRALGETSTFDDVMRVADAERG
CEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHCC
GRLFGQCAACHTISPGAGDRNGPGLYDVLGKPVASNSRRYGYTGALRSLGGVWTPELMDL
CHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHH
WLSAPAKLAPGTSMSFRGLPDALDRADIIAYLLTQSPGDGDAEPRPARP
HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLCCLGQTRSRILRRPARAVALALALLASACSDDGRERRRALGETSTFDDVMRVADAERG
CEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHCC
GRLFGQCAACHTISPGAGDRNGPGLYDVLGKPVASNSRRYGYTGALRSLGGVWTPELMDL
CHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHH
WLSAPAKLAPGTSMSFRGLPDALDRADIIAYLLTQSPGDGDAEPRPARP
HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]