| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170749662
Identifier: 170749662
GI number: 170749662
Start: 3452672
End: 3453682
Strand: Direct
Name: 170749662
Synonym: Mrad2831_3259
Alternate gene names: NA
Gene position: 3452672-3453682 (Clockwise)
Preceding gene: 170749640
Following gene: 170749663
Centisome position: 56.81
GC content: 70.92
Gene sequence:
>1011_bases ATGTCGATCCGCCACGCGGCCGCCGCCGCGCGCCTCCTCGTCGCCGCGCTGATGCTTCCGGCCCTCGGCGGGGCGGCGCG GGCCGAGACGGCCTCCGTCCGCATCGGTCTCCAGTACGGCCTCGTCTACCTGCCGGTGATGATCGCGCAGAGCGAGGGGC TGTTCGACAAGCGCGCCAAGGAAGCCGGGCTCGACGGGCTGACCGTGACGCTGACCCGCTTCAGCGGCTCGACGGCGATG AACGACGCGCTGCTCTCCGACAGCGTCGAGCTCGGCACCCTCGGCTCGGCCGGCGCCCTGATCGCCTGGGACAAGACCCG CGGGAGCCAGCAGATCAAGAGCCTGACTGCCCTGAGCTCGGTCGTCTACACGCTGTTCACAGGCAAGCCCGGCGTCGCGG CGCTGAAGGACTTCACCTTCGGCGACAAGATCGCGGTCCCAGCCTTCAACTCGCCCCAGGCGATCCTGCTGCGGGTCGCG GCGGCGCAGCAGCTCGGCGGATCGGCCAAGGCCGACGCGCTGATGGTGAGCCTGCCCCATCCGGACGCCACCGCGGCGAT GCGCGCCGGACAGGGCATCGCCGGCTACTTCGCGACGCCGCCCTTCACGCAGGTCCTGCAGGCGGACCCCAAGATCCGCG CGATCATGACCTCGACCGGCCTGATCGGCAGCGGCGACATCACCGCCGCCACCCTGAACGCCAAGCAGGGCTTCGTCGAC GCGAACCCGAAGGTCGCGCAGGCGATCCGCGCCGGGATGGAGGACGCGGTGGCGCTGATCCGGAGCGACCCCAAGCGCGC GGCGACGATCTACCTCGCCTCCGAGCAGGTGCAGATCGACCGCGCGCAGGTCGAGACGATCCTGACCGACGGCTCCATCG TCTACGACGTGGCGCCGAAGGGGATGGTGAACCTGGCCAAGGCGATGGCGACGCAGGGCTTCCTGCGGAAGGTGCCGGGC GACTGGCAGGAGATCTTCTTCCCCGGCCTCCAGGGCCGCGACGGGAGCTGA
Upstream 100 bases:
>100_bases GTCCGCGCTCTGCCCTATTCGTCCGCGGTGTCGGCTGGGTCTGACCGACCGGCACCGGGAGACCGCGCGTCAAGCGCGGC CCTGTCCGGGAGGAATGCCG
Downstream 100 bases:
>100_bases GCGACGCGGATCCGGCGCCGCCCACACATCCCATCGCTCACGGAACCCGGATGCACAGCTTCCGCTTCAGCGCCGAGCCG CTCCCGCCCGAGGTCGAGGC
Product: putative periplasmic substrate-binding transmembrane protein
Products: NA
Alternate protein names: NMT1/THI5 Like Domain Protein; NLPA Lipoprotein; Transporter Periplasmic Component; Nlpa Lipoprotein; ABC-Type Transporter Periplasmic; Periplasmic Protein
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MSIRHAAAAARLLVAALMLPALGGAARAETASVRIGLQYGLVYLPVMIAQSEGLFDKRAKEAGLDGLTVTLTRFSGSTAM NDALLSDSVELGTLGSAGALIAWDKTRGSQQIKSLTALSSVVYTLFTGKPGVAALKDFTFGDKIAVPAFNSPQAILLRVA AAQQLGGSAKADALMVSLPHPDATAAMRAGQGIAGYFATPPFTQVLQADPKIRAIMTSTGLIGSGDITAATLNAKQGFVD ANPKVAQAIRAGMEDAVALIRSDPKRAATIYLASEQVQIDRAQVETILTDGSIVYDVAPKGMVNLAKAMATQGFLRKVPG DWQEIFFPGLQGRDGS
Sequences:
>Translated_336_residues MSIRHAAAAARLLVAALMLPALGGAARAETASVRIGLQYGLVYLPVMIAQSEGLFDKRAKEAGLDGLTVTLTRFSGSTAM NDALLSDSVELGTLGSAGALIAWDKTRGSQQIKSLTALSSVVYTLFTGKPGVAALKDFTFGDKIAVPAFNSPQAILLRVA AAQQLGGSAKADALMVSLPHPDATAAMRAGQGIAGYFATPPFTQVLQADPKIRAIMTSTGLIGSGDITAATLNAKQGFVD ANPKVAQAIRAGMEDAVALIRSDPKRAATIYLASEQVQIDRAQVETILTDGSIVYDVAPKGMVNLAKAMATQGFLRKVPG DWQEIFFPGLQGRDGS >Mature_335_residues SIRHAAAAARLLVAALMLPALGGAARAETASVRIGLQYGLVYLPVMIAQSEGLFDKRAKEAGLDGLTVTLTRFSGSTAMN DALLSDSVELGTLGSAGALIAWDKTRGSQQIKSLTALSSVVYTLFTGKPGVAALKDFTFGDKIAVPAFNSPQAILLRVAA AQQLGGSAKADALMVSLPHPDATAAMRAGQGIAGYFATPPFTQVLQADPKIRAIMTSTGLIGSGDITAATLNAKQGFVDA NPKVAQAIRAGMEDAVALIRSDPKRAATIYLASEQVQIDRAQVETILTDGSIVYDVAPKGMVNLAKAMATQGFLRKVPGD WQEIFFPGLQGRDGS
Specific function: Unknown
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34919; Mature: 34787
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIRHAAAAARLLVAALMLPALGGAARAETASVRIGLQYGLVYLPVMIAQSEGLFDKRAK CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCHHHHHH EAGLDGLTVTLTRFSGSTAMNDALLSDSVELGTLGSAGALIAWDKTRGSQQIKSLTALSS HCCCCCEEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHH VVYTLFTGKPGVAALKDFTFGDKIAVPAFNSPQAILLRVAAAQQLGGSAKADALMVSLPH HHHHHHCCCCCHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCC PDATAAMRAGQGIAGYFATPPFTQVLQADPKIRAIMTSTGLIGSGDITAATLNAKQGFVD CCHHHHHHCCCCCEECCCCCCHHHHHHCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCC ANPKVAQAIRAGMEDAVALIRSDPKRAATIYLASEQVQIDRAQVETILTDGSIVYDVAPK CCHHHHHHHHHCHHHHHHHHHCCCCCEEEEEEECCCEEHHHHHHHEEEECCCEEEEECCC GMVNLAKAMATQGFLRKVPGDWQEIFFPGLQGRDGS HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCC >Mature Secondary Structure SIRHAAAAARLLVAALMLPALGGAARAETASVRIGLQYGLVYLPVMIAQSEGLFDKRAK CCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCHHHHHH EAGLDGLTVTLTRFSGSTAMNDALLSDSVELGTLGSAGALIAWDKTRGSQQIKSLTALSS HCCCCCEEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHH VVYTLFTGKPGVAALKDFTFGDKIAVPAFNSPQAILLRVAAAQQLGGSAKADALMVSLPH HHHHHHCCCCCHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCC PDATAAMRAGQGIAGYFATPPFTQVLQADPKIRAIMTSTGLIGSGDITAATLNAKQGFVD CCHHHHHHCCCCCEECCCCCCHHHHHHCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCC ANPKVAQAIRAGMEDAVALIRSDPKRAATIYLASEQVQIDRAQVETILTDGSIVYDVAPK CCHHHHHHHHHCHHHHHHHHHCCCCCEEEEEEECCCEEHHHHHHHEEEECCCEEEEECCC GMVNLAKAMATQGFLRKVPGDWQEIFFPGLQGRDGS HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA