| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is gsiD [H]
Identifier: 170749644
GI number: 170749644
Start: 3433860
End: 3434762
Strand: Reverse
Name: gsiD [H]
Synonym: Mrad2831_3241
Alternate gene names: 170749644
Gene position: 3434762-3433860 (Counterclockwise)
Preceding gene: 170749645
Following gene: 170749643
Centisome position: 56.51
GC content: 70.76
Gene sequence:
>903_bases GTGACCGACATCCTCGTCCCCGCCGCCCCCACCGTCGCGCCCGTCCCCACCGGCATCCGGACGCCGTGGTCGGAATTCTG GCGCAAGTTCCGCCGCCAGCGCGTTGCCGTCGTCGCCCTGGGCTTCATCGGCCTGCTGGTCGTGGTCGCCGTGCTGGCGC CGTGGATCGTGCCCTACGACCCGGTCAACGACTTCGACTACGACCGGATCAACGAGGGCCCCTCGCTCGCGCACTGGCTC GGCGTCGATCCCCTCGGGCGCGACATCCTGAGCCGCATCGTCGAGGGCGCCCGGATCTCCCTCGCGACCGGCTTCCTGTC GGTCGCCGTCGGCGGCCTCGTCGGGACCGTGCTCGGTCTCCTGGCGGGCTATTACGGCGGCTGGTGGGACCGGATCGTCA TGCGCATGTCCGACGTGCTGTTCGCCTTCCCGGGCATCCTCCTGGCGCTCGGCGTCGTCGCCATCCTGGGCTCCGGGCTC GTCAACGTCGTCGTGGCGGTCTCGGTCTTCAGCGTCCCGGCCTTCGCGCGCCTCGTGCGCGGCACGACCCTGGTCCTGAA GAACAGCACCTACATCGAGGCCGCGCGGAGCATCGGCGCCCCCGACCGGACGATCCTCCTGCGCCACATCCTGCCGGGCA CGATCTCGGGCATCGTGGTCTACTTCACCATGCGACTGGGCACCTCGATCATCACGGCCGCGAGCCTGTCGTTCCTCGGC ATGGGCGCGCAGCCGCCGACGCCCGAGTGGGGCGCCATGCTGAACGAGGCGCGCGCCGACATGGTCTCGGCGCCGCACGT CGCGCTGTTCCCGAGCCTCGCGATCTTCTTCACGGTGCTGGCCTTCAACCTCCTCGGGGACGGGCTCCGGGACGCCCTCG ACCCGAAGATCGACCGCCTGTGA
Upstream 100 bases:
>100_bases CTGGTCCTGCTGTTCTCCCTGGAGTTCATCCTGATCAACCTGGTCGTGGACGTGCTCTACGGCCTCATCAACCCGACCAT CCGCTACAGGTGAGCCGGCC
Downstream 100 bases:
>100_bases TGCAGGCCGCTCCCGCGCGCCCAGCGCCCCGCGTCGGCCGCCTGCCGCGGGGCCCGCGCGACGCCATCACCGACGTCCCG GGCGTGACGGTCGGCCATTG
Product: binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MTDILVPAAPTVAPVPTGIRTPWSEFWRKFRRQRVAVVALGFIGLLVVVAVLAPWIVPYDPVNDFDYDRINEGPSLAHWL GVDPLGRDILSRIVEGARISLATGFLSVAVGGLVGTVLGLLAGYYGGWWDRIVMRMSDVLFAFPGILLALGVVAILGSGL VNVVVAVSVFSVPAFARLVRGTTLVLKNSTYIEAARSIGAPDRTILLRHILPGTISGIVVYFTMRLGTSIITAASLSFLG MGAQPPTPEWGAMLNEARADMVSAPHVALFPSLAIFFTVLAFNLLGDGLRDALDPKIDRL
Sequences:
>Translated_300_residues MTDILVPAAPTVAPVPTGIRTPWSEFWRKFRRQRVAVVALGFIGLLVVVAVLAPWIVPYDPVNDFDYDRINEGPSLAHWL GVDPLGRDILSRIVEGARISLATGFLSVAVGGLVGTVLGLLAGYYGGWWDRIVMRMSDVLFAFPGILLALGVVAILGSGL VNVVVAVSVFSVPAFARLVRGTTLVLKNSTYIEAARSIGAPDRTILLRHILPGTISGIVVYFTMRLGTSIITAASLSFLG MGAQPPTPEWGAMLNEARADMVSAPHVALFPSLAIFFTVLAFNLLGDGLRDALDPKIDRL >Mature_299_residues TDILVPAAPTVAPVPTGIRTPWSEFWRKFRRQRVAVVALGFIGLLVVVAVLAPWIVPYDPVNDFDYDRINEGPSLAHWLG VDPLGRDILSRIVEGARISLATGFLSVAVGGLVGTVLGLLAGYYGGWWDRIVMRMSDVLFAFPGILLALGVVAILGSGLV NVVVAVSVFSVPAFARLVRGTTLVLKNSTYIEAARSIGAPDRTILLRHILPGTISGIVVYFTMRLGTSIITAASLSFLGM GAQPPTPEWGAMLNEARADMVSAPHVALFPSLAIFFTVLAFNLLGDGLRDALDPKIDRL
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1173
COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787054, Length=283, Percent_Identity=73.1448763250883, Blast_Score=434, Evalue=1e-123, Organism=Escherichia coli, GI1789964, Length=292, Percent_Identity=44.8630136986301, Blast_Score=208, Evalue=3e-55, Organism=Escherichia coli, GI1787760, Length=252, Percent_Identity=38.0952380952381, Blast_Score=199, Evalue=2e-52, Organism=Escherichia coli, GI1787498, Length=282, Percent_Identity=37.5886524822695, Blast_Score=169, Evalue=2e-43, Organism=Escherichia coli, GI1789889, Length=245, Percent_Identity=37.1428571428571, Blast_Score=167, Evalue=6e-43, Organism=Escherichia coli, GI1787549, Length=275, Percent_Identity=34.9090909090909, Blast_Score=140, Evalue=1e-34, Organism=Escherichia coli, GI1788505, Length=225, Percent_Identity=32.8888888888889, Blast_Score=116, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32116; Mature: 31985
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDILVPAAPTVAPVPTGIRTPWSEFWRKFRRQRVAVVALGFIGLLVVVAVLAPWIVPYD CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PVNDFDYDRINEGPSLAHWLGVDPLGRDILSRIVEGARISLATGFLSVAVGGLVGTVLGL CCCCCCCHHCCCCCCHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LAGYYGGWWDRIVMRMSDVLFAFPGILLALGVVAILGSGLVNVVVAVSVFSVPAFARLVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GTTLVLKNSTYIEAARSIGAPDRTILLRHILPGTISGIVVYFTMRLGTSIITAASLSFLG CCEEEEECCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC MGAQPPTPEWGAMLNEARADMVSAPHVALFPSLAIFFTVLAFNLLGDGLRDALDPKIDRL CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TDILVPAAPTVAPVPTGIRTPWSEFWRKFRRQRVAVVALGFIGLLVVVAVLAPWIVPYD CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PVNDFDYDRINEGPSLAHWLGVDPLGRDILSRIVEGARISLATGFLSVAVGGLVGTVLGL CCCCCCCHHCCCCCCHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LAGYYGGWWDRIVMRMSDVLFAFPGILLALGVVAILGSGLVNVVVAVSVFSVPAFARLVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GTTLVLKNSTYIEAARSIGAPDRTILLRHILPGTISGIVVYFTMRLGTSIITAASLSFLG CCEEEEECCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC MGAQPPTPEWGAMLNEARADMVSAPHVALFPSLAIFFTVLAFNLLGDGLRDALDPKIDRL CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]