| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170749619
Identifier: 170749619
GI number: 170749619
Start: 3401546
End: 3402982
Strand: Reverse
Name: 170749619
Synonym: Mrad2831_3216
Alternate gene names: NA
Gene position: 3402982-3401546 (Counterclockwise)
Preceding gene: 170749620
Following gene: 170749618
Centisome position: 55.99
GC content: 74.18
Gene sequence:
>1437_bases ATGGACCAGATCCGCACGACCCGGACCGATCTCGGCGAGATGGACGCGGTGGAGCTCGGGGCGCTGTTCGCGTCCGGCCG GGTCTCGCCGGTGGAGGCCGCGCAGGCGGCGCTGGCACGCATCGAGCGGTTCAACCCGCAGGTGAATGCCTTCGCGTATG TCGCGCCCGAACCGGCGCTCGAGGCCGCGCGGGCCTCGGAGGCGCGCTGGGCGAAGGGCGAGGCGCTGAGCCCGATCGAC GGGGTGCCGACGACGATCAAGGAACTGACCGCCGTCAAGGGCATCCCGTGGCGGCGGGGCTCGAAGCTCACCGGCGAGGC CCCGGCCACCGACGAGATCCTGGTGATGCGGCGCCTGCGCGCCGCCGGGGCGGTCATCCTCGGCACGACCACGTCGCCGG AATTCGGCTGGAAGGGCGTGACCCACGGCCCGGCCTTCGGCAACACCGTCAATCCCTGGGGCACCGATCGGGCCTCGGGG GGCTCCTCGGGCGGGGCCGGCGTCGCCGCCGCCCTGAACATGGGCGTGCTGCACGAGGGATCCGACGGGGCGGGCTCGAT CCGCATCCCGTCGTCGTTCTGCGGCGTCTTCGGGATCAAGCCGACCTTCGGCTGGCTGGCCACCGACGCGCCGACGCCGC TGCGGGACATGGCCCATCGCGGCCCGCTCACCCGGACGGTGGCGGATTCCGCCCTGTTCCTGAACGCCGTCACGGGCCCG TCCCCGGACGGCCTGTACGGCGACTGCCCGAGCCCCGTCCCGGACTGGACGGAGGCCGCCCGCGGCGGCGTCGCGGGCCT GCGCATCGGCTACAGCCGGACCTTCGGCTACGCCCGCGTCGATCCCGAGGTCGCCGCCGCGGTGGACCGGGCCGCCGCCC GCCTCGCCGCGATGGGCGCCGTCGTCGAGGAGGCCGATCCCGGCTTCGCCTCGCCCCTGGAGGCGCTGCGGGTGATCTGG TTCTCCGCCATGGCGGTCCTCGTGGATCGCTTCGCCCCCACCGAGACGGATCGCGCGCGCATGGATCCCGGATTCGTCGC CGTCGCCGAGATCGGGCGCCGCACCAGCGCGGCGGACCTCCTGGCGGCGGAGCAGGTCCGGGCCGAGCTGAAGGTCACGA TGGCGCGCTTCCACGCGCGCTACGACCTGCTCCTCTCCCCGACCATGCCGGTCACCGCGATCCCGGCGGGCATCGACTTC CCCGAGGGGCAGGGCATGACCGACTGGACCGACTGGAGCCCCTTCACCTACCCGTTCAACATGACCGGCCAGGCCGCACT CTCGGTGCCCTGCGGCTTCGATTCGGGCGGCCTGCCGATCGGGCTGCAGATGGTCGCCGCCCGGTTCCGGGACGACCTCG TCCTGCGGGCCGCCGCGGCCTACCAAGCCGCCTACCCGGAGGCGTTCCCGGACGCCCCTGTGGTCCGGCCCGCCTGA
Upstream 100 bases:
>100_bases CCCTGTGCTTCTGCCCGCCGCTGATCATCACCGCGGAGCAGATCGGCGCGATGTTCGACGCCGTCGGCCGTGCCCTCGAC ACGATCGCCGCGTGAGCCCG
Downstream 100 bases:
>100_bases GGGCGCAGGGCGCGCCGGTCTCGAAGCACCTGTCTGGATCCCCGATGTCCCATCCCACGATCGACGCCCCCGAGAGCGGC ATCGGCGCCGGCCTGTCGGT
Product: amidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 478; Mature: 478
Protein sequence:
>478_residues MDQIRTTRTDLGEMDAVELGALFASGRVSPVEAAQAALARIERFNPQVNAFAYVAPEPALEAARASEARWAKGEALSPID GVPTTIKELTAVKGIPWRRGSKLTGEAPATDEILVMRRLRAAGAVILGTTTSPEFGWKGVTHGPAFGNTVNPWGTDRASG GSSGGAGVAAALNMGVLHEGSDGAGSIRIPSSFCGVFGIKPTFGWLATDAPTPLRDMAHRGPLTRTVADSALFLNAVTGP SPDGLYGDCPSPVPDWTEAARGGVAGLRIGYSRTFGYARVDPEVAAAVDRAAARLAAMGAVVEEADPGFASPLEALRVIW FSAMAVLVDRFAPTETDRARMDPGFVAVAEIGRRTSAADLLAAEQVRAELKVTMARFHARYDLLLSPTMPVTAIPAGIDF PEGQGMTDWTDWSPFTYPFNMTGQAALSVPCGFDSGGLPIGLQMVAARFRDDLVLRAAAAYQAAYPEAFPDAPVVRPA
Sequences:
>Translated_478_residues MDQIRTTRTDLGEMDAVELGALFASGRVSPVEAAQAALARIERFNPQVNAFAYVAPEPALEAARASEARWAKGEALSPID GVPTTIKELTAVKGIPWRRGSKLTGEAPATDEILVMRRLRAAGAVILGTTTSPEFGWKGVTHGPAFGNTVNPWGTDRASG GSSGGAGVAAALNMGVLHEGSDGAGSIRIPSSFCGVFGIKPTFGWLATDAPTPLRDMAHRGPLTRTVADSALFLNAVTGP SPDGLYGDCPSPVPDWTEAARGGVAGLRIGYSRTFGYARVDPEVAAAVDRAAARLAAMGAVVEEADPGFASPLEALRVIW FSAMAVLVDRFAPTETDRARMDPGFVAVAEIGRRTSAADLLAAEQVRAELKVTMARFHARYDLLLSPTMPVTAIPAGIDF PEGQGMTDWTDWSPFTYPFNMTGQAALSVPCGFDSGGLPIGLQMVAARFRDDLVLRAAAAYQAAYPEAFPDAPVVRPA >Mature_478_residues MDQIRTTRTDLGEMDAVELGALFASGRVSPVEAAQAALARIERFNPQVNAFAYVAPEPALEAARASEARWAKGEALSPID GVPTTIKELTAVKGIPWRRGSKLTGEAPATDEILVMRRLRAAGAVILGTTTSPEFGWKGVTHGPAFGNTVNPWGTDRASG GSSGGAGVAAALNMGVLHEGSDGAGSIRIPSSFCGVFGIKPTFGWLATDAPTPLRDMAHRGPLTRTVADSALFLNAVTGP SPDGLYGDCPSPVPDWTEAARGGVAGLRIGYSRTFGYARVDPEVAAAVDRAAARLAAMGAVVEEADPGFASPLEALRVIW FSAMAVLVDRFAPTETDRARMDPGFVAVAEIGRRTSAADLLAAEQVRAELKVTMARFHARYDLLLSPTMPVTAIPAGIDF PEGQGMTDWTDWSPFTYPFNMTGQAALSVPCGFDSGGLPIGLQMVAARFRDDLVLRAAAAYQAAYPEAFPDAPVVRPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amidase family [H]
Homologues:
Organism=Homo sapiens, GI222831590, Length=506, Percent_Identity=27.6679841897233, Blast_Score=139, Evalue=7e-33, Organism=Homo sapiens, GI195972892, Length=502, Percent_Identity=24.5019920318725, Blast_Score=123, Evalue=3e-28, Organism=Homo sapiens, GI166795287, Length=230, Percent_Identity=33.4782608695652, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17538252, Length=331, Percent_Identity=27.7945619335347, Blast_Score=112, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17537465, Length=502, Percent_Identity=24.3027888446215, Blast_Score=95, Evalue=7e-20, Organism=Caenorhabditis elegans, GI17556264, Length=310, Percent_Identity=27.0967741935484, Blast_Score=95, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17556276, Length=309, Percent_Identity=28.4789644012945, Blast_Score=89, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17556278, Length=309, Percent_Identity=28.4789644012945, Blast_Score=89, Evalue=4e-18, Organism=Caenorhabditis elegans, GI71990152, Length=293, Percent_Identity=28.6689419795222, Blast_Score=86, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17543272, Length=432, Percent_Identity=25, Blast_Score=75, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17538254, Length=305, Percent_Identity=26.2295081967213, Blast_Score=73, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6319685, Length=410, Percent_Identity=24.6341463414634, Blast_Score=89, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6320448, Length=220, Percent_Identity=32.2727272727273, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI24644968, Length=510, Percent_Identity=28.0392156862745, Blast_Score=155, Evalue=6e-38, Organism=Drosophila melanogaster, GI24648113, Length=478, Percent_Identity=28.6610878661088, Blast_Score=128, Evalue=1e-29, Organism=Drosophila melanogaster, GI24648435, Length=499, Percent_Identity=24.4488977955912, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI24648437, Length=499, Percent_Identity=24.4488977955912, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI45550774, Length=499, Percent_Identity=24.4488977955912, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI161078093, Length=506, Percent_Identity=26.8774703557312, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI21356731, Length=502, Percent_Identity=24.5019920318725, Blast_Score=96, Evalue=5e-20, Organism=Drosophila melanogaster, GI24648441, Length=424, Percent_Identity=24.0566037735849, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI24648439, Length=424, Percent_Identity=24.0566037735849, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI24652985, Length=484, Percent_Identity=24.3801652892562, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI19922090, Length=484, Percent_Identity=24.3801652892562, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI24652981, Length=484, Percent_Identity=24.3801652892562, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI24652983, Length=484, Percent_Identity=24.3801652892562, Blast_Score=88, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000120 - InterPro: IPR020556 [H]
Pfam domain/function: PF01425 Amidase [H]
EC number: =3.5.1.4 [H]
Molecular weight: Translated: 50170; Mature: 50170
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQIRTTRTDLGEMDAVELGALFASGRVSPVEAAQAALARIERFNPQVNAFAYVAPEPAL CCCCCCCHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHH EAARASEARWAKGEALSPIDGVPTTIKELTAVKGIPWRRGSKLTGEAPATDEILVMRRLR HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH AAGAVILGTTTSPEFGWKGVTHGPAFGNTVNPWGTDRASGGSSGGAGVAAALNMGVLHEG HCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCEEECC SDGAGSIRIPSSFCGVFGIKPTFGWLATDAPTPLRDMAHRGPLTRTVADSALFLNAVTGP CCCCCEEECCHHHHHHCCCCCCCCEEECCCCCCHHHHHHCCCCHHHHHHHHHEEEECCCC SPDGLYGDCPSPVPDWTEAARGGVAGLRIGYSRTFGYARVDPEVAAAVDRAAARLAAMGA CCCCCCCCCCCCCCCHHHHHCCCCCEEEECHHHCCCCEECCHHHHHHHHHHHHHHHHHHH VVEEADPGFASPLEALRVIWFSAMAVLVDRFAPTETDRARMDPGFVAVAEIGRRTSAADL HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCEEEHHHHCCCCHHHHH LAAEQVRAELKVTMARFHARYDLLLSPTMPVTAIPAGIDFPEGQGMTDWTDWSPFTYPFN HHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECC MTGQAALSVPCGFDSGGLPIGLQMVAARFRDDLVLRAAAAYQAAYPEAFPDAPVVRPA CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MDQIRTTRTDLGEMDAVELGALFASGRVSPVEAAQAALARIERFNPQVNAFAYVAPEPAL CCCCCCCHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHH EAARASEARWAKGEALSPIDGVPTTIKELTAVKGIPWRRGSKLTGEAPATDEILVMRRLR HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH AAGAVILGTTTSPEFGWKGVTHGPAFGNTVNPWGTDRASGGSSGGAGVAAALNMGVLHEG HCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCEEECC SDGAGSIRIPSSFCGVFGIKPTFGWLATDAPTPLRDMAHRGPLTRTVADSALFLNAVTGP CCCCCEEECCHHHHHHCCCCCCCCEEECCCCCCHHHHHHCCCCHHHHHHHHHEEEECCCC SPDGLYGDCPSPVPDWTEAARGGVAGLRIGYSRTFGYARVDPEVAAAVDRAAARLAAMGA CCCCCCCCCCCCCCCHHHHHCCCCCEEEECHHHCCCCEECCHHHHHHHHHHHHHHHHHHH VVEEADPGFASPLEALRVIWFSAMAVLVDRFAPTETDRARMDPGFVAVAEIGRRTSAADL HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCEEEHHHHCCCCHHHHH LAAEQVRAELKVTMARFHARYDLLLSPTMPVTAIPAGIDFPEGQGMTDWTDWSPFTYPFN HHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECC MTGQAALSVPCGFDSGGLPIGLQMVAARFRDDLVLRAAAAYQAAYPEAFPDAPVVRPA CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]