| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is comM [H]
Identifier: 170749545
GI number: 170749545
Start: 3319631
End: 3321169
Strand: Reverse
Name: comM [H]
Synonym: Mrad2831_3140
Alternate gene names: 170749545
Gene position: 3321169-3319631 (Counterclockwise)
Preceding gene: 170749549
Following gene: 170749544
Centisome position: 54.64
GC content: 75.37
Gene sequence:
>1539_bases ATGGTCACCCGCGTCGCCACCGTGGCCTTCGAGGGCATCGAGGCGCGGGCGGTGGACGTGCAGGTCCAGATCGTCCCGGG CTCCGTGGTCTTCACCGTCGTCGGTCTGCCCGACAAGGCGGTGGCGGAATCGCGCGAGCGGGTCCGCAGCGCGCTGATCG CCTCCGGACTGGCACTGCCCGCCAAGCGCATCACGGTGAATCTCGCTCCGGCGGATCTTCCCAAGGAAGGCTCGCACTTC GACCTGCCGATCGCGCTGGGCGTCATGGCGGCGATCGGCGCGATCCCGGCCGACGCGCTCGCCGGCTACTGCGTCCTCGG CGAACTCGCCCTCGACGGCAGCATCACGGCGGTCAGCGGCGTGCTGCCGGCCGCCGTGGCGGCCGGTGCCCGGGGGCTCG GGCTCATCTGCCCGGCCGCCACCGGACCGGAGGCGGCCTGGGCCGGGGGCGACCTCGACGTGCTCGCGCCGCGCTCGCTG ATCCAGCTCGCCAACCATTTCAAGGGCAGCCAGGTCATGGCGCGGCCGGAGCCCGCCGTCGCCGCGCCGACCGGGCCGCT TCCGGACCTCGCCGACATCCGGGGGCAGGAGGGTGCCAAGCGCGCCCTCGAGGTCGCGGCGGCCGGCGGCCACAACCTGC TGATGAACGGTCCGCCGGGCTCGGGCAAATCCATGCTCGCGGCCCGTCTGCCGTCGATCCTGCCGCCGCTCACGCCGCGC GAGCTGCTCGACATCTCCATGATCCAGTCGGTGGCGGGCGCGCTGAAGGGCGGCGCCCTCTCCAGCCGCCGCCCGTTCCG GCAGCCGCACCATTCCGCCTCGATGGCGGCGCTCGTGGGTGGCGGGCTCGGCGCCCGGCCCGGGGAGGTCTCCCTCGCCC ATGGCGGGGTGCTGTTCCTGGACGAGCTGCCCGAATTCGCCCCGCAGGTGCTCGACAGCCTGCGCCAGCCGATGGAAACC GGGGCGGTGATGATCGCCCGGGCCAACCACCGGGTCACCTACCCGGCGCGCTTCCAGCTGGTCGCGGCGATGAACCCGTG CCGCTGCGGCCAGGGACTCGAACCGGGCTACGCCTGCCGGCGCGGGCCGAACGCGCGCTGCATGGCGCAGTACCAGGCGC GGATCTCCGGACCGTTGCTCGACCGCATCGACCTGCGCGTCGAGGTGCCGGCGGTCACGGCCGCCGACCTGATCCTGCCG GCGCCGGCCGAGGGCTCCCGCGAGGCGGCCGCGCGCGTGTCGGCCGCCCGCGCCCTCCAGGGCGCGCGCTACGCCGCGCG CGGTCTGCCGGATTCCACCACCAACGCGACCTGTCCGGCGACGCTGATCTCGGACGTCGCGAGCCCCGACGCCGACGGGA CGGCGCTGATCCGTCAGGCGGCCGAGAGCATGCGCCTCTCCGCCCGCGGCTTCCACCGGACGCTGCGCGTCGCCCGGACC CTCGCCGATCTCGACGGCGAGGCCCAGGTCCGCCGGCTCCACCTCGCGGAGGCCCTGTCGTACCGGGGCCGCGGCGACGG CGCGGCGGCCGCCGCGTGA
Upstream 100 bases:
>100_bases GGCGGCAGCGGAGTTCCATGGCGGCGATGCCCTTGAGCCGCTCCCGGATCTGCCGCACATCTGGGCCGTACCGGAACGCG GCGGCGAGGACTTGGCACCG
Downstream 100 bases:
>100_bases GTGCCGTCTCGGACGGTCCGGCCGACCTGACGGTCACGATCGGCCAGCACAGCAGCGCCGGCCGCAAGGCGGCCAACCAG GACTTCAACGGCGCCCTGGT
Product: Mg chelatase subunit ChlI
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 512; Mature: 512
Protein sequence:
>512_residues MVTRVATVAFEGIEARAVDVQVQIVPGSVVFTVVGLPDKAVAESRERVRSALIASGLALPAKRITVNLAPADLPKEGSHF DLPIALGVMAAIGAIPADALAGYCVLGELALDGSITAVSGVLPAAVAAGARGLGLICPAATGPEAAWAGGDLDVLAPRSL IQLANHFKGSQVMARPEPAVAAPTGPLPDLADIRGQEGAKRALEVAAAGGHNLLMNGPPGSGKSMLAARLPSILPPLTPR ELLDISMIQSVAGALKGGALSSRRPFRQPHHSASMAALVGGGLGARPGEVSLAHGGVLFLDELPEFAPQVLDSLRQPMET GAVMIARANHRVTYPARFQLVAAMNPCRCGQGLEPGYACRRGPNARCMAQYQARISGPLLDRIDLRVEVPAVTAADLILP APAEGSREAAARVSAARALQGARYAARGLPDSTTNATCPATLISDVASPDADGTALIRQAAESMRLSARGFHRTLRVART LADLDGEAQVRRLHLAEALSYRGRGDGAAAAA
Sequences:
>Translated_512_residues MVTRVATVAFEGIEARAVDVQVQIVPGSVVFTVVGLPDKAVAESRERVRSALIASGLALPAKRITVNLAPADLPKEGSHF DLPIALGVMAAIGAIPADALAGYCVLGELALDGSITAVSGVLPAAVAAGARGLGLICPAATGPEAAWAGGDLDVLAPRSL IQLANHFKGSQVMARPEPAVAAPTGPLPDLADIRGQEGAKRALEVAAAGGHNLLMNGPPGSGKSMLAARLPSILPPLTPR ELLDISMIQSVAGALKGGALSSRRPFRQPHHSASMAALVGGGLGARPGEVSLAHGGVLFLDELPEFAPQVLDSLRQPMET GAVMIARANHRVTYPARFQLVAAMNPCRCGQGLEPGYACRRGPNARCMAQYQARISGPLLDRIDLRVEVPAVTAADLILP APAEGSREAAARVSAARALQGARYAARGLPDSTTNATCPATLISDVASPDADGTALIRQAAESMRLSARGFHRTLRVART LADLDGEAQVRRLHLAEALSYRGRGDGAAAAA >Mature_512_residues MVTRVATVAFEGIEARAVDVQVQIVPGSVVFTVVGLPDKAVAESRERVRSALIASGLALPAKRITVNLAPADLPKEGSHF DLPIALGVMAAIGAIPADALAGYCVLGELALDGSITAVSGVLPAAVAAGARGLGLICPAATGPEAAWAGGDLDVLAPRSL IQLANHFKGSQVMARPEPAVAAPTGPLPDLADIRGQEGAKRALEVAAAGGHNLLMNGPPGSGKSMLAARLPSILPPLTPR ELLDISMIQSVAGALKGGALSSRRPFRQPHHSASMAALVGGGLGARPGEVSLAHGGVLFLDELPEFAPQVLDSLRQPMET GAVMIARANHRVTYPARFQLVAAMNPCRCGQGLEPGYACRRGPNARCMAQYQARISGPLLDRIDLRVEVPAVTAADLILP APAEGSREAAARVSAARALQGARYAARGLPDSTTNATCPATLISDVASPDADGTALIRQAAESMRLSARGFHRTLRVART LADLDGEAQVRRLHLAEALSYRGRGDGAAAAA
Specific function: Induced during competence development. Not needed for DNA uptake. May be involved in a recombination step [H]
COG id: COG0606
COG function: function code O; Predicted ATPase with chaperone activity
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]
Homologues:
Organism=Escherichia coli, GI145693202, Length=506, Percent_Identity=41.897233201581, Blast_Score=360, Evalue=1e-100,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR001208 - InterPro: IPR004482 - InterPro: IPR000523 - InterPro: IPR020568 [H]
Pfam domain/function: PF01078 Mg_chelatase [H]
EC number: NA
Molecular weight: Translated: 52562; Mature: 52562
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTRVATVAFEGIEARAVDVQVQIVPGSVVFTVVGLPDKAVAESRERVRSALIASGLALP CCCEEEEHEECCCEEEEEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCC AKRITVNLAPADLPKEGSHFDLPIALGVMAAIGAIPADALAGYCVLGELALDGSITAVSG CEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHEEHHHCCCCHHHHHH VLPAAVAAGARGLGLICPAATGPEAAWAGGDLDVLAPRSLIQLANHFKGSQVMARPEPAV HHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCC AAPTGPLPDLADIRGQEGAKRALEVAAAGGHNLLMNGPPGSGKSMLAARLPSILPPLTPR CCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHH ELLDISMIQSVAGALKGGALSSRRPFRQPHHSASMAALVGGGLGARPGEVSLAHGGVLFL HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEECCCEEEH DELPEFAPQVLDSLRQPMETGAVMIARANHRVTYPARFQLVAAMNPCRCGQGLEPGYACR HHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEECCHHEEEEEECCCHHCCCCCCCCCHHC RGPNARCMAQYQARISGPLLDRIDLRVEVPAVTAADLILPAPAEGSREAAARVSAARALQ CCCCHHHHHHHHHHHCCCCHHCCCEEEECCCEEECCEEECCCCCCCHHHHHHHHHHHHHH GARYAARGLPDSTTNATCPATLISDVASPDADGTALIRQAAESMRLSARGFHRTLRVART HHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LADLDGEAQVRRLHLAEALSYRGRGDGAAAAA HHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MVTRVATVAFEGIEARAVDVQVQIVPGSVVFTVVGLPDKAVAESRERVRSALIASGLALP CCCEEEEHEECCCEEEEEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCC AKRITVNLAPADLPKEGSHFDLPIALGVMAAIGAIPADALAGYCVLGELALDGSITAVSG CEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHEEHHHCCCCHHHHHH VLPAAVAAGARGLGLICPAATGPEAAWAGGDLDVLAPRSLIQLANHFKGSQVMARPEPAV HHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCC AAPTGPLPDLADIRGQEGAKRALEVAAAGGHNLLMNGPPGSGKSMLAARLPSILPPLTPR CCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHH ELLDISMIQSVAGALKGGALSSRRPFRQPHHSASMAALVGGGLGARPGEVSLAHGGVLFL HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEECCCEEEH DELPEFAPQVLDSLRQPMETGAVMIARANHRVTYPARFQLVAAMNPCRCGQGLEPGYACR HHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEECCHHEEEEEECCCHHCCCCCCCCCHHC RGPNARCMAQYQARISGPLLDRIDLRVEVPAVTAADLILPAPAEGSREAAARVSAARALQ CCCCHHHHHHHHHHHCCCCHHCCCEEEECCCEEECCEEECCCCCCCHHHHHHHHHHHHHH GARYAARGLPDSTTNATCPATLISDVASPDADGTALIRQAAESMRLSARGFHRTLRVART HHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LADLDGEAQVRRLHLAEALSYRGRGDGAAAAA HHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800; 9457884 [H]