Click here to switch to the map view.

The map label for this gene is ylbA [H]

Identifier: 170749418

GI number: 170749418

Start: 3166079

End: 3166918

Strand: Reverse

Name: ylbA [H]

Synonym: Mrad2831_3011

Alternate gene names: 170749418

Gene position: 3166918-3166079 (Counterclockwise)

Preceding gene: 170749419

Following gene: 170749417

Centisome position: 52.11

GC content: 73.45

Gene sequence:

>840_bases
ATGAGCGCTGGAGCCTACAATCCCCCCTGCGGAGGCCTGCCCGGCCAGACGCGGCTGATGACGGGCCGGGCGGTGTTCAC
CGAGGCCTACGCGGTGATCCCCCACGGCGTGATGAGCGACATCGTCACCAGCCGCCTGCCGGGCTGGGACGATGCCCAGG
CCTGGATCCTGGCCCGGCCGCTCTCGGGCTTCGCTGAGACCTTCGCCCAGTACCTCATGGAGGTCGCCCCCGGCGGCGGC
AGCCGGGCCCCCGAGCCGGAGCCGCAGGCGCAGGGCGTCCTGTTCGTGGTCGCCGGCACGGCCAGCCTCACGCTGGACGG
CGCGCGCCACCCCCTGCGGCCGGGCAGCTACGCCTACCTCGCCCCCGGCGCCGCCTGGGCCCTGCGCAACGACGGCCACG
AACCCGTGCGCTTCCACTGGGTCCGCAAGGCCTACCAGCCCGCCGCCGGCCTGGACGCGCCGAGCTCCTTCGTCACGCAC
GAGTCGGCGGTCGAGCCGGCCGGCATGGTCGGCACCGACGGCGCCTGGGCGACGACCCGCTTCGTCGCCTCCGACGACCT
GCGACACGACATGCACGTCAACATCGTCAGCCTGCGCCCGGGCGCCTCGATCCCCTTCGAGGAGACCCACGTCATGGAGC
ACGGACTGTTCGTGCTGGAAGGCAAGGCGGTCTACCGGCTCAACCGCGACTGGGTCGAGGTCGAGGCGGGCGACTTCATG
TGGCTGCGCGCCTTCTGCCCGCAGGCCTGCTACGCGGGTGGCCCGGGCCCGTTCCGGTACCTGCTGTACAAGGACGTCAA
CCGGCACCCGGCGCTGGCGCCGCGCGGGCTCGGCCGGTGA

Upstream 100 bases:

>100_bases
ACGGCGGAGATCCTCGACGCACCGGTCGCGGAGCCGCACACCGCGTGACCGATCCCCTGCCCGACGTTTACAGCTTGAAG
TCGAATCGCGGAGACCGACC

Downstream 100 bases:

>100_bases
GCGCGGACCCCCGCACGCTCGTCGCCCGGCCGCTCACGGCCGAGGCGTTCGCGCCATTCGGCACGGTGATCGACGCGGCC
GCGGTGGCGCCGCGGCCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MSAGAYNPPCGGLPGQTRLMTGRAVFTEAYAVIPHGVMSDIVTSRLPGWDDAQAWILARPLSGFAETFAQYLMEVAPGGG
SRAPEPEPQAQGVLFVVAGTASLTLDGARHPLRPGSYAYLAPGAAWALRNDGHEPVRFHWVRKAYQPAAGLDAPSSFVTH
ESAVEPAGMVGTDGAWATTRFVASDDLRHDMHVNIVSLRPGASIPFEETHVMEHGLFVLEGKAVYRLNRDWVEVEAGDFM
WLRAFCPQACYAGGPGPFRYLLYKDVNRHPALAPRGLGR

Sequences:

>Translated_279_residues
MSAGAYNPPCGGLPGQTRLMTGRAVFTEAYAVIPHGVMSDIVTSRLPGWDDAQAWILARPLSGFAETFAQYLMEVAPGGG
SRAPEPEPQAQGVLFVVAGTASLTLDGARHPLRPGSYAYLAPGAAWALRNDGHEPVRFHWVRKAYQPAAGLDAPSSFVTH
ESAVEPAGMVGTDGAWATTRFVASDDLRHDMHVNIVSLRPGASIPFEETHVMEHGLFVLEGKAVYRLNRDWVEVEAGDFM
WLRAFCPQACYAGGPGPFRYLLYKDVNRHPALAPRGLGR
>Mature_278_residues
SAGAYNPPCGGLPGQTRLMTGRAVFTEAYAVIPHGVMSDIVTSRLPGWDDAQAWILARPLSGFAETFAQYLMEVAPGGGS
RAPEPEPQAQGVLFVVAGTASLTLDGARHPLRPGSYAYLAPGAAWALRNDGHEPVRFHWVRKAYQPAAGLDAPSSFVTHE
SAVEPAGMVGTDGAWATTRFVASDDLRHDMHVNIVSLRPGASIPFEETHVMEHGLFVLEGKAVYRLNRDWVEVEAGDFMW
LRAFCPQACYAGGPGPFRYLLYKDVNRHPALAPRGLGR

Specific function: Unknown

COG id: COG3257

COG function: function code R; Uncharacterized protein, possibly involved in glyoxylate utilization

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786725, Length=253, Percent_Identity=30.4347826086957, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017627
- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR008579
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2; PF05899 Cupin_3 [H]

EC number: NA

Molecular weight: Translated: 30167; Mature: 30036

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAGAYNPPCGGLPGQTRLMTGRAVFTEAYAVIPHGVMSDIVTSRLPGWDDAQAWILARP
CCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEECC
LSGFAETFAQYLMEVAPGGGSRAPEPEPQAQGVLFVVAGTASLTLDGARHPLRPGSYAYL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCEEEE
APGAAWALRNDGHEPVRFHWVRKAYQPAAGLDAPSSFVTHESAVEPAGMVGTDGAWATTR
CCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCHHHCCCCCCCCCCCCCCEEE
FVASDDLRHDMHVNIVSLRPGASIPFEETHVMEHGLFVLEGKAVYRLNRDWVEVEAGDFM
EEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHCCEEEEECCEEEEECCCEEEEECCCEE
WLRAFCPQACYAGGPGPFRYLLYKDVNRHPALAPRGLGR
EHHHHCCHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
SAGAYNPPCGGLPGQTRLMTGRAVFTEAYAVIPHGVMSDIVTSRLPGWDDAQAWILARP
CCCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEECC
LSGFAETFAQYLMEVAPGGGSRAPEPEPQAQGVLFVVAGTASLTLDGARHPLRPGSYAYL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCEEEE
APGAAWALRNDGHEPVRFHWVRKAYQPAAGLDAPSSFVTHESAVEPAGMVGTDGAWATTR
CCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCHHHCCCCCCCCCCCCCCEEE
FVASDDLRHDMHVNIVSLRPGASIPFEETHVMEHGLFVLEGKAVYRLNRDWVEVEAGDFM
EEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHCCEEEEECCEEEEECCCEEEEECCCEE
WLRAFCPQACYAGGPGPFRYLLYKDVNRHPALAPRGLGR
EHHHHCCHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10601204; 9278503 [H]