| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170749304
Identifier: 170749304
GI number: 170749304
Start: 3050249
End: 3051178
Strand: Reverse
Name: 170749304
Synonym: Mrad2831_2897
Alternate gene names: NA
Gene position: 3051178-3050249 (Counterclockwise)
Preceding gene: 170749305
Following gene: 170749300
Centisome position: 50.2
GC content: 67.31
Gene sequence:
>930_bases ATGGCCTCACAGCGGAAAGTCATCATCACCTGCGCGGTGACGGGCGCGATCCATACGCCCAGCATGTCGCCGCATCTGCC GGTGACGCCCGAGGAGATCGCCGACGCCGCCATCGGCGCCGCCGAGGCGGGCGCGGCCATCGTGCACCTGCACGCCCGCA ACCCGGAGAACGGCCAGCCCGACCAGACTCCCGAGGCCTTCGCCAAGTTCCTGCCGGTGATCAAGCAGCGCTCGAACTGC GTGGTGAACATCACCACGGGCGGCGCGCCGACCATGTCGATCGAGGAGCGGGTGCGCCCGGCCGCGACCTTCCAGCCGGA GGTCGCCTCGCTGAACCTCGGCTCGATGAATTTCGGCCTGTTCGGCATGCTCGACCGGTTCAAGGACCTGAAGCACCAGT GGGAGCGGGACTATCTCGGCAACAAGGACATCATCTTCCGCAACACCTTCGGCCAGATCGAGCACATCCTGACGACCTGC GGCCCCAACGGGACGAAGTTCGAGTTCGAGTGCTACGACACGGCGCATCTCTACAATCTGAAATACTTCTTCGACCGCGG TCTCGTGCAGGCGCCGCTGTTCATCCAGACGGTGTTCGGCCTCCAGGGCGGCATCGGCGCGCATCCGGACGACGTCATGC ACATGAAGCGCACCGCCGACCGTCTCTTCGGTGACCAGTACCGCTGGTCGGTGCTCGGGGCGGGCCGCAACCAGATGAAC ATCGCCGCCATGGCGGCCGCCATGGGCGGCAATGTCCGCGTCGGTCTCGAGGACAGCCTCTGGGACGGTCCGGGCAAGCT CGCCGAGACCAACGCCGCGCAGGTCCGGCGCGTGCGCGCGATCATCGAGGGGCTGGGCCTCGCGGTCGCCTCGCCCGACG AGGCGCGGGAGATCCTGGCGCTAAAGGGCGGCGACAAGGTCGCGTTCTGA
Upstream 100 bases:
>100_bases CGAACTGGCAGGCGCCCGCGGACCTGCCCGCCCGCATGAACCGCCGCGATGCGCGGCTCGCGGCCCTGCGGGCCCACAAG GCTTCACAGAAGGACTGAGC
Downstream 100 bases:
>100_bases CCGACCAGTCGATGGACGATGCGTCGCGGAAAGTGGAACGCATCGTCCAGGACCAGCTGACGTTCAGGCTCTTCCGCCCT TGCGAGCGCAACGAAGCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MASQRKVIITCAVTGAIHTPSMSPHLPVTPEEIADAAIGAAEAGAAIVHLHARNPENGQPDQTPEAFAKFLPVIKQRSNC VVNITTGGAPTMSIEERVRPAATFQPEVASLNLGSMNFGLFGMLDRFKDLKHQWERDYLGNKDIIFRNTFGQIEHILTTC GPNGTKFEFECYDTAHLYNLKYFFDRGLVQAPLFIQTVFGLQGGIGAHPDDVMHMKRTADRLFGDQYRWSVLGAGRNQMN IAAMAAAMGGNVRVGLEDSLWDGPGKLAETNAAQVRRVRAIIEGLGLAVASPDEAREILALKGGDKVAF
Sequences:
>Translated_309_residues MASQRKVIITCAVTGAIHTPSMSPHLPVTPEEIADAAIGAAEAGAAIVHLHARNPENGQPDQTPEAFAKFLPVIKQRSNC VVNITTGGAPTMSIEERVRPAATFQPEVASLNLGSMNFGLFGMLDRFKDLKHQWERDYLGNKDIIFRNTFGQIEHILTTC GPNGTKFEFECYDTAHLYNLKYFFDRGLVQAPLFIQTVFGLQGGIGAHPDDVMHMKRTADRLFGDQYRWSVLGAGRNQMN IAAMAAAMGGNVRVGLEDSLWDGPGKLAETNAAQVRRVRAIIEGLGLAVASPDEAREILALKGGDKVAF >Mature_308_residues ASQRKVIITCAVTGAIHTPSMSPHLPVTPEEIADAAIGAAEAGAAIVHLHARNPENGQPDQTPEAFAKFLPVIKQRSNCV VNITTGGAPTMSIEERVRPAATFQPEVASLNLGSMNFGLFGMLDRFKDLKHQWERDYLGNKDIIFRNTFGQIEHILTTCG PNGTKFEFECYDTAHLYNLKYFFDRGLVQAPLFIQTVFGLQGGIGAHPDDVMHMKRTADRLFGDQYRWSVLGAGRNQMNI AAMAAAMGGNVRVGLEDSLWDGPGKLAETNAAQVRRVRAIIEGLGLAVASPDEAREILALKGGDKVAF
Specific function: Unknown
COG id: COG3246
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33590; Mature: 33459
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASQRKVIITCAVTGAIHTPSMSPHLPVTPEEIADAAIGAAEAGAAIVHLHARNPENGQP CCCCCEEEEEEEEECCEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCC DQTPEAFAKFLPVIKQRSNCVVNITTGGAPTMSIEERVRPAATFQPEVASLNLGSMNFGL CCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHCCCCCCCCCCCEEEECCCCCCHH FGMLDRFKDLKHQWERDYLGNKDIIFRNTFGQIEHILTTCGPNGTKFEFECYDTAHLYNL HHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCCCEEEEEEECCEEEEEE KYFFDRGLVQAPLFIQTVFGLQGGIGAHPDDVMHMKRTADRLFGDQYRWSVLGAGRNQMN HHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHH IAAMAAAMGGNVRVGLEDSLWDGPGKLAETNAAQVRRVRAIIEGLGLAVASPDEAREILA HHHHHHHCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCHHHHEEEE LKGGDKVAF EECCCCCCC >Mature Secondary Structure ASQRKVIITCAVTGAIHTPSMSPHLPVTPEEIADAAIGAAEAGAAIVHLHARNPENGQP CCCCEEEEEEEEECCEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCC DQTPEAFAKFLPVIKQRSNCVVNITTGGAPTMSIEERVRPAATFQPEVASLNLGSMNFGL CCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHCCCCCCCCCCCEEEECCCCCCHH FGMLDRFKDLKHQWERDYLGNKDIIFRNTFGQIEHILTTCGPNGTKFEFECYDTAHLYNL HHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCCCEEEEEEECCEEEEEE KYFFDRGLVQAPLFIQTVFGLQGGIGAHPDDVMHMKRTADRLFGDQYRWSVLGAGRNQMN HHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHH IAAMAAAMGGNVRVGLEDSLWDGPGKLAETNAAQVRRVRAIIEGLGLAVASPDEAREILA HHHHHHHCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCHHHHEEEE LKGGDKVAF EECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA