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The map label for this gene is 170748844

Identifier: 170748844

GI number: 170748844

Start: 2589508

End: 2590173

Strand: Reverse

Name: 170748844

Synonym: Mrad2831_2426

Alternate gene names: NA

Gene position: 2590173-2589508 (Counterclockwise)

Preceding gene: 170748846

Following gene: 170748843

Centisome position: 42.62

GC content: 72.22

Gene sequence:

>666_bases
ATGGCACCGAGCCCTCTCGCCCTCATCGCCTCCGCCGCCCTCATCGCCGTGGTCGCCACCGGCACCGGGGCGATCGTCCT
CCAGCAGGGCTCGCGGTTCAGCCATCCCCGGAAGGTCGGCGGGCCGTTCACGATGGCGGATCTCGACGGCCGCCCGGTGA
CCGAGGCCGATCTCCGCGGCAAGCCGTCCGTCCTGTTCTTCGGCTTCACCCACTGCCCGGATGTCTGCCCGACGACGCTC
GCGACCCTGTCGGCCGCCCTCGGCCGGATGGGCCGCGACGCGGACCGCCTCAACGTCGTCTTCGTCACCCTCGACCCGGA
GCGCGACACGCCCGACGCCCTGCGGGAGTACCTGGCCTCGTTCGATCCGCGGATCCGCGGCCTCGTCGGCACGCCGCAGC
AGGTCGCCCGCATGGCCGACGCCTACCACGTCGCCTACAAGCGCGTGCCGACCAAGGACGGCGACTACACGATGGAGCAT
TCCGCCACCGTGGCGCTGTTCGACAGGACCGGGCGCATGGTCGGGGAGATCGGCTACGGCGAGGACGAGGCCAGCACCTT
CGCGAAGCTGATCACCCTGGCGCTGCCGGGGCAGTGCCCGCCGGGAGGCGGTGCCAACCTCTGGACGACCGACGGCAGCA
CCGGCAGCTGCGGTCCGCGGAGCTGA

Upstream 100 bases:

>100_bases
CCGGCCCCGCACGGCGCGCCGGGCCTCACGCCGGTCGACACGGACCCCATATTGGCCGCATCGATACCGTCCGCTTCGAC
GCGCCGTCGCAGGTCACAGC

Downstream 100 bases:

>100_bases
GCCGCGGGCCGGGAAATTGCGCCGCCGCGCCGGCGTGGCTAGAGGGCGGCGCGGGTCGCGAGGCCCGGCCGCATCGGGGG
GTTCCAGCTTGATCACGCGC

Product: electron transport protein SCO1/SenC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MAPSPLALIASAALIAVVATGTGAIVLQQGSRFSHPRKVGGPFTMADLDGRPVTEADLRGKPSVLFFGFTHCPDVCPTTL
ATLSAALGRMGRDADRLNVVFVTLDPERDTPDALREYLASFDPRIRGLVGTPQQVARMADAYHVAYKRVPTKDGDYTMEH
SATVALFDRTGRMVGEIGYGEDEASTFAKLITLALPGQCPPGGGANLWTTDGSTGSCGPRS

Sequences:

>Translated_221_residues
MAPSPLALIASAALIAVVATGTGAIVLQQGSRFSHPRKVGGPFTMADLDGRPVTEADLRGKPSVLFFGFTHCPDVCPTTL
ATLSAALGRMGRDADRLNVVFVTLDPERDTPDALREYLASFDPRIRGLVGTPQQVARMADAYHVAYKRVPTKDGDYTMEH
SATVALFDRTGRMVGEIGYGEDEASTFAKLITLALPGQCPPGGGANLWTTDGSTGSCGPRS
>Mature_220_residues
APSPLALIASAALIAVVATGTGAIVLQQGSRFSHPRKVGGPFTMADLDGRPVTEADLRGKPSVLFFGFTHCPDVCPTTLA
TLSAALGRMGRDADRLNVVFVTLDPERDTPDALREYLASFDPRIRGLVGTPQQVARMADAYHVAYKRVPTKDGDYTMEHS
ATVALFDRTGRMVGEIGYGEDEASTFAKLITLALPGQCPPGGGANLWTTDGSTGSCGPRS

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SCO1/2 family [H]

Homologues:

Organism=Homo sapiens, GI281182727, Length=151, Percent_Identity=37.0860927152318, Blast_Score=104, Evalue=6e-23,
Organism=Homo sapiens, GI281182722, Length=151, Percent_Identity=37.0860927152318, Blast_Score=104, Evalue=6e-23,
Organism=Homo sapiens, GI281182716, Length=151, Percent_Identity=37.0860927152318, Blast_Score=104, Evalue=6e-23,
Organism=Homo sapiens, GI153791313, Length=151, Percent_Identity=37.0860927152318, Blast_Score=104, Evalue=6e-23,
Organism=Homo sapiens, GI4759068, Length=161, Percent_Identity=32.9192546583851, Blast_Score=100, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI17531419, Length=164, Percent_Identity=29.2682926829268, Blast_Score=99, Evalue=1e-21,
Organism=Saccharomyces cerevisiae, GI6319498, Length=155, Percent_Identity=40, Blast_Score=132, Evalue=4e-32,
Organism=Saccharomyces cerevisiae, GI6319511, Length=156, Percent_Identity=38.4615384615385, Blast_Score=113, Evalue=3e-26,
Organism=Drosophila melanogaster, GI19920710, Length=157, Percent_Identity=30.5732484076433, Blast_Score=103, Evalue=8e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003782
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02630 SCO1-SenC [H]

EC number: NA

Molecular weight: Translated: 23311; Mature: 23180

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPSPLALIASAALIAVVATGTGAIVLQQGSRFSHPRKVGGPFTMADLDGRPVTEADLRG
CCCCHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCHHCCCC
KPSVLFFGFTHCPDVCPTTLATLSAALGRMGRDADRLNVVFVTLDPERDTPDALREYLAS
CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
FDPRIRGLVGTPQQVARMADAYHVAYKRVPTKDGDYTMEHSATVALFDRTGRMVGEIGYG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEECCCCEEEECCCC
EDEASTFAKLITLALPGQCPPGGGANLWTTDGSTGSCGPRS
CHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCC
>Mature Secondary Structure 
APSPLALIASAALIAVVATGTGAIVLQQGSRFSHPRKVGGPFTMADLDGRPVTEADLRG
CCCHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCHHCCCC
KPSVLFFGFTHCPDVCPTTLATLSAALGRMGRDADRLNVVFVTLDPERDTPDALREYLAS
CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
FDPRIRGLVGTPQQVARMADAYHVAYKRVPTKDGDYTMEHSATVALFDRTGRMVGEIGYG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEECCCCEEEECCCC
EDEASTFAKLITLALPGQCPPGGGANLWTTDGSTGSCGPRS
CHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]