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The map label for this gene is ytfM [C]

Identifier: 170748807

GI number: 170748807

Start: 2534832

End: 2536790

Strand: Reverse

Name: ytfM [C]

Synonym: Mrad2831_2389

Alternate gene names: 170748807

Gene position: 2536790-2534832 (Counterclockwise)

Preceding gene: 170748809

Following gene: 170748806

Centisome position: 41.74

GC content: 71.82

Gene sequence:

>1959_bases
ATGCGTCGCGCATCGCCGCCGAGGCTGGCCGCCCTGGCCCTAGCCCTGCTGGTCGCCGCGGGGGCTCAACCCGCGCGCGC
GTTCGACCTGTTCGGCCTGTTCGGCAGCGAGCCGGAACCGCCGCCGCCGAGCGCGACCGCGCTCCCGTACACGCTGCGGA
TCACCGGCACGGACGATTCCGACGTGCTGCGGGCCCTGCAGGACACCTCCACCCTCTATCGCCTGAGGCAGGAACCCCCG
CCCGACGGCGAGGGGCTGCTGCGCCGGGCCGAGACCGATCTCGCCAAGCTCGCCGACGTCCTGTCGGGCTACGGCTACTA
TCAAGGAGCGGTGACGATCCGGGTCGACGGCGCGCCGGTGCCGGGCCAGGCGACGGCCGCGGTCGGTGCCGCGGAGGCGT
GGCGCAACCGCGGCCTCGTCCCGGTCCGGATCGCGGTCGATCTCGGGCCCCTCTACCATCTGCGCCGGATCACCGTGCGC
GATCCGGCCGGCAACCCGTTCCCGGAAGCCGAGCTGCCCGCGCGGGTCACCCGCGTCGACGAGGATGTTCCCGCGCGCTC
CGCCACGGTGCTGGCGCGGGAAGCGCAGATCGTCGACCACTTCCGCGCCCAGGGCCGTCCCTTCGCCAAGGTGGTCGCGC
GCGATCCCGTGGTGGACGATTCCGCCCACGCGATGGACGTGACCTTCACGGTGGCGCCGGGCCCGGTGGCCGGACTAGGC
CCCGTCGCCGTCAGCGGTGCGCCGGGGATCGACCCGGCGACCATCCGATCCTTCATCTACGCCGAGCCGGGCGACCCGTA
CTCACCCCAGGCGGTGGCCGCGATCCGCCGGTCCGTGGCGCGGATCGAGGGGATCGGCGGCGTCCGGGTTCGCGAGGGGA
CGACCCTCGACGCCGACGGGAACCTGCCGCTGTTCGTCGAGGTCACCGAGCGCGAGCGCAACCTCGTGGGCGTCTCGGCG
CGCTACTCCACGGTCGACGGGCCGGGCGTGCGGGCCTACTACGCCAACCGCAACCTGTTCGGCGGCGGCGAATCCTTCCG
CGTGGACGCCGACCTCTACTATCTGGGTCTCGGGAACGACCCGTTCGCCAACCAGCGCAAGGCCGCGGGCATCGGTACGA
ACGGCCTCGGCGGACGTCTCTCGGCGACCTACGTCCAGCCGGCCCTGTGGGGGACGCGCAACGACTTCCTGGCGAACGCC
TTCATCACCCGCGAGGTGCAGCAGAGCTACCTCGTGGATGGCGGGGGTGTCTCGGGGGCGATCCGTCACCGGTTCTCGGA
CACGTTCTCGGCGCAGATCGGGCTTGATGCCCAGGTTGGCCGGTCGAAGGACGCCCTCGGCACGGTCGATTACCGGCTGA
TCGGCGTGCCGGCCTCGGTCACCTACGATTCCACCGACAGCCTCCTCGACCCGACGCGGGGCGTCCGGGCCATCGCGTCG
CTGGCGGTCTATCCCGGCGCGATCTCCTCGCCCGGCATCGTCGTGGCCAAGGCGCAGGGATCGACATACTACGCCCTCGA
CGACGAGGCCCGCATGATCCTGGCCGGCCGCATCGGCTTCGGTTCGGTCTCGGGCGCGCCGCTGGGGGAGATCCCCGACA
ATTTCAGGTTCTTCGCGGGCGGCGGCGGCTCGGTGCGGGGCTACCCGTACCGCACCCTCGGACCGATCGGCCCCTTCAAC
CTGCCGATCGGCGGCCGCAGCCTGCTGGAGGCCTCGCTCGAGGCGCGCATCAAGGTCACCGACACGATCGGCGTGGTGCC
GTTCTTCGACGCGGGCACCGCCTTCGCCTCGGCGACGCCGGATTTCGACGAGAAGATCCGCAAATCCGTGGGCATCGGCC
TGCGCTACTACACCGGCATCGGCCCGATCCGCGCGGACGTCGCCTTCCCGCTCGACCCCTACAAGGGCGGACACGTGCGT
CCCGCCGTCCTGTATCTCAGCCTGGGGCAGGCTTTCTGA

Upstream 100 bases:

>100_bases
GCAATGATCTCACAGGCGGGCGGCACGGCCGACCTTGATCGGAGCTGAAGAGCGCGGTTTGCGCGTCTCCGCTCCCTTTC
CTCGTCCGGCCCACCCGGCG

Downstream 100 bases:

>100_bases
ATGGCGTTCCGAACCGGACCGACGCAGCGCGCCGCGCATCCGACCGCCCGTCACGGCCGGTGGGACCTGGTGCTCGTCCT
GGTCGGCCTCGCCCTGCTGC

Product: surface antigen (D15)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 652; Mature: 652

Protein sequence:

>652_residues
MRRASPPRLAALALALLVAAGAQPARAFDLFGLFGSEPEPPPPSATALPYTLRITGTDDSDVLRALQDTSTLYRLRQEPP
PDGEGLLRRAETDLAKLADVLSGYGYYQGAVTIRVDGAPVPGQATAAVGAAEAWRNRGLVPVRIAVDLGPLYHLRRITVR
DPAGNPFPEAELPARVTRVDEDVPARSATVLAREAQIVDHFRAQGRPFAKVVARDPVVDDSAHAMDVTFTVAPGPVAGLG
PVAVSGAPGIDPATIRSFIYAEPGDPYSPQAVAAIRRSVARIEGIGGVRVREGTTLDADGNLPLFVEVTERERNLVGVSA
RYSTVDGPGVRAYYANRNLFGGGESFRVDADLYYLGLGNDPFANQRKAAGIGTNGLGGRLSATYVQPALWGTRNDFLANA
FITREVQQSYLVDGGGVSGAIRHRFSDTFSAQIGLDAQVGRSKDALGTVDYRLIGVPASVTYDSTDSLLDPTRGVRAIAS
LAVYPGAISSPGIVVAKAQGSTYYALDDEARMILAGRIGFGSVSGAPLGEIPDNFRFFAGGGGSVRGYPYRTLGPIGPFN
LPIGGRSLLEASLEARIKVTDTIGVVPFFDAGTAFASATPDFDEKIRKSVGIGLRYYTGIGPIRADVAFPLDPYKGGHVR
PAVLYLSLGQAF

Sequences:

>Translated_652_residues
MRRASPPRLAALALALLVAAGAQPARAFDLFGLFGSEPEPPPPSATALPYTLRITGTDDSDVLRALQDTSTLYRLRQEPP
PDGEGLLRRAETDLAKLADVLSGYGYYQGAVTIRVDGAPVPGQATAAVGAAEAWRNRGLVPVRIAVDLGPLYHLRRITVR
DPAGNPFPEAELPARVTRVDEDVPARSATVLAREAQIVDHFRAQGRPFAKVVARDPVVDDSAHAMDVTFTVAPGPVAGLG
PVAVSGAPGIDPATIRSFIYAEPGDPYSPQAVAAIRRSVARIEGIGGVRVREGTTLDADGNLPLFVEVTERERNLVGVSA
RYSTVDGPGVRAYYANRNLFGGGESFRVDADLYYLGLGNDPFANQRKAAGIGTNGLGGRLSATYVQPALWGTRNDFLANA
FITREVQQSYLVDGGGVSGAIRHRFSDTFSAQIGLDAQVGRSKDALGTVDYRLIGVPASVTYDSTDSLLDPTRGVRAIAS
LAVYPGAISSPGIVVAKAQGSTYYALDDEARMILAGRIGFGSVSGAPLGEIPDNFRFFAGGGGSVRGYPYRTLGPIGPFN
LPIGGRSLLEASLEARIKVTDTIGVVPFFDAGTAFASATPDFDEKIRKSVGIGLRYYTGIGPIRADVAFPLDPYKGGHVR
PAVLYLSLGQAF
>Mature_652_residues
MRRASPPRLAALALALLVAAGAQPARAFDLFGLFGSEPEPPPPSATALPYTLRITGTDDSDVLRALQDTSTLYRLRQEPP
PDGEGLLRRAETDLAKLADVLSGYGYYQGAVTIRVDGAPVPGQATAAVGAAEAWRNRGLVPVRIAVDLGPLYHLRRITVR
DPAGNPFPEAELPARVTRVDEDVPARSATVLAREAQIVDHFRAQGRPFAKVVARDPVVDDSAHAMDVTFTVAPGPVAGLG
PVAVSGAPGIDPATIRSFIYAEPGDPYSPQAVAAIRRSVARIEGIGGVRVREGTTLDADGNLPLFVEVTERERNLVGVSA
RYSTVDGPGVRAYYANRNLFGGGESFRVDADLYYLGLGNDPFANQRKAAGIGTNGLGGRLSATYVQPALWGTRNDFLANA
FITREVQQSYLVDGGGVSGAIRHRFSDTFSAQIGLDAQVGRSKDALGTVDYRLIGVPASVTYDSTDSLLDPTRGVRAIAS
LAVYPGAISSPGIVVAKAQGSTYYALDDEARMILAGRIGFGSVSGAPLGEIPDNFRFFAGGGGSVRGYPYRTLGPIGPFN
LPIGGRSLLEASLEARIKVTDTIGVVPFFDAGTAFASATPDFDEKIRKSVGIGLRYYTGIGPIRADVAFPLDPYKGGHVR
PAVLYLSLGQAF

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ytfM [H]

Homologues:

Organism=Escherichia coli, GI1790666, Length=138, Percent_Identity=31.1594202898551, Blast_Score=67, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184 [H]

Pfam domain/function: PF01103 Bac_surface_Ag [H]

EC number: NA

Molecular weight: Translated: 68809; Mature: 68809

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRASPPRLAALALALLVAAGAQPARAFDLFGLFGSEPEPPPPSATALPYTLRITGTDDS
CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCHH
DVLRALQDTSTLYRLRQEPPPDGEGLLRRAETDLAKLADVLSGYGYYQGAVTIRVDGAPV
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCC
PGQATAAVGAAEAWRNRGLVPVRIAVDLGPLYHLRRITVRDPAGNPFPEAELPARVTRVD
CCCHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCHHHHHCC
EDVPARSATVLAREAQIVDHFRAQGRPFAKVVARDPVVDDSAHAMDVTFTVAPGPVAGLG
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCC
PVAVSGAPGIDPATIRSFIYAEPGDPYSPQAVAAIRRSVARIEGIGGVRVREGTTLDADG
CEEECCCCCCCHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCEECCCC
NLPLFVEVTERERNLVGVSARYSTVDGPGVRAYYANRNLFGGGESFRVDADLYYLGLGND
CCEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEECCEEECCCCCEEEECEEEEEECCCC
PFANQRKAAGIGTNGLGGRLSATYVQPALWGTRNDFLANAFITREVQQSYLVDGGGVSGA
CCCCCCCCCCCCCCCCCCCEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHEECCCCCCHH
IRHRFSDTFSAQIGLDAQVGRSKDALGTVDYRLIGVPASVTYDSTDSLLDPTRGVRAIAS
HHHHHCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCHHHHHHHHH
LAVYPGAISSPGIVVAKAQGSTYYALDDEARMILAGRIGFGSVSGAPLGEIPDNFRFFAG
HHHCCCCCCCCCEEEEEECCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEC
GGGSVRGYPYRTLGPIGPFNLPIGGRSLLEASLEARIKVTDTIGVVPFFDAGTAFASATP
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEEEEEEECCEEEECCCCHHCCCCC
DFDEKIRKSVGIGLRYYTGIGPIRADVAFPLDPYKGGHVRPAVLYLSLGQAF
CHHHHHHHHHCCCEEEECCCCCEEECEECCCCCCCCCCCCEEEEEEECCCCC
>Mature Secondary Structure
MRRASPPRLAALALALLVAAGAQPARAFDLFGLFGSEPEPPPPSATALPYTLRITGTDDS
CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCHH
DVLRALQDTSTLYRLRQEPPPDGEGLLRRAETDLAKLADVLSGYGYYQGAVTIRVDGAPV
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCC
PGQATAAVGAAEAWRNRGLVPVRIAVDLGPLYHLRRITVRDPAGNPFPEAELPARVTRVD
CCCHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCHHHHHCC
EDVPARSATVLAREAQIVDHFRAQGRPFAKVVARDPVVDDSAHAMDVTFTVAPGPVAGLG
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCC
PVAVSGAPGIDPATIRSFIYAEPGDPYSPQAVAAIRRSVARIEGIGGVRVREGTTLDADG
CEEECCCCCCCHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCEECCCC
NLPLFVEVTERERNLVGVSARYSTVDGPGVRAYYANRNLFGGGESFRVDADLYYLGLGND
CCEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEECCEEECCCCCEEEECEEEEEECCCC
PFANQRKAAGIGTNGLGGRLSATYVQPALWGTRNDFLANAFITREVQQSYLVDGGGVSGA
CCCCCCCCCCCCCCCCCCCEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHEECCCCCCHH
IRHRFSDTFSAQIGLDAQVGRSKDALGTVDYRLIGVPASVTYDSTDSLLDPTRGVRAIAS
HHHHHCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCHHHHHHHHH
LAVYPGAISSPGIVVAKAQGSTYYALDDEARMILAGRIGFGSVSGAPLGEIPDNFRFFAG
HHHCCCCCCCCCEEEEEECCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEC
GGGSVRGYPYRTLGPIGPFNLPIGGRSLLEASLEARIKVTDTIGVVPFFDAGTAFASATP
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEEEEEEECCEEEECCCCHHCCCCC
DFDEKIRKSVGIGLRYYTGIGPIRADVAFPLDPYKGGHVRPAVLYLSLGQAF
CHHHHHHHHHCCCEEEECCCCCEEECEECCCCCCCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]