| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is murC
Identifier: 170748773
GI number: 170748773
Start: 2491286
End: 2492692
Strand: Reverse
Name: murC
Synonym: Mrad2831_2355
Alternate gene names: 170748773
Gene position: 2492692-2491286 (Counterclockwise)
Preceding gene: 170748774
Following gene: 170748772
Centisome position: 41.01
GC content: 69.01
Gene sequence:
>1407_bases ATGAAGCTGCCCGACAAGCTCGGCCCCATCCACTTCATCGGCATCGGCGGCATCGGCATGTCCGGCATCGCCGAGGTGAT GCACAACCTCGGCTACACGGTGCAGGGCTCGGACGCGTCCGACAACGCCAATGTCCGCCGTCTCGCCGAGAAGGGCATGC GCACCTTCGTGGGCCACGACGCCAAGAACGTCGAGGAGGCCGCCCTCGTCGTCGTCTCGACCGCGATCCGGCGCGACAAC CCCGAGTTGCAGGCCGCCCGCGAGCGACGCCTGCCCGTGGTGCGACGGGCCGAGATGCTGGCCGAGCTGATGCGCTTCAA GTCCTGCGTGGCGATCGCCGGCACGCACGGGAAGACCACGACCACGTCGCTCGTCGCCACCCTGCTCGACGCCGGCAACC TCGACCCGACCGTGATCAACGGCGGCATCATCAACGCCTACGGCACCAACGCCCGCATGGGCGCGGGCGAGTGGATGGTG GTGGAGGCCGACGAGTCCGACGGCACCTTCCTGAAGCTGCCGGCCGACGTCGCGATCGTCACCAACATCGACCCCGAGCA CCTCGACCATTTCGGCTCGTTCGACGCGATCAAGGACGCGTTCCGGCGCTTCATCGACAACATCCCGTTCTACGGCTTCG CGGTGATGTGCATCGACCACCCGGTGGTGCAGGATCTCGTCGGCCATATCGAGGACCGGCGGATCATCACCTACGGTGAG AACCCGCAGGCCGATGTGCGCCTCATCGACGTGGACCTGCGCGGCGGCCAGAGCCGCTTCCGGGTGATGATCCGCGACCG TCGCCCCGGCTACCGGATGGAGATGGAGGATCTCGTCCTGCCGATGCCCGGCAAGCACAACGCGCTCAACGCCACCGCGG CGCTCGCCGTCGCGCACGAGCTCGGCGTGAAGCCGGACGCGATCCGCCAGGCACTCGCGGGCTTCGGCGGCGTGAAGCGG CGCTTCACCCGCACCGGCGAGTGGAACGGCGCGACGATCTTCGACGATTACGGACACCACCCGGTGGAGATCAAGGCGGT GCTCAAGGCCGCCCGTGCCTCGACCGAGCACGGCGTCATCGCGGTGGTGCAGCCGCACCGCTACACCCGGCTGCAGTCGC TGTTCGACGATTTCTGCACCTGCTTCAACGATGCCGACACGGTCATCGTCGCGCCGGTCTACGCGGCCGGCGAGCAGCCG ATCGAGGGTTTCGACCGCGACAGCCTCGTGGCCGGCCTGCGCTCCCGCGGCCATCGGGACGCCCGGGCCCTGGAGCGGCC GGAGGAACTGGCCGGGATCATCGCGGACCTCGCCAAGCCCGGCGATTACGTGGTCTGCCTCGGCGCCGGCACGATCACGC AGTGGGCCTACGCCCTGCCGGACGAACTCACCGCGCGGGGACGGTAG
Upstream 100 bases:
>100_bases GCCGCCGAGCGGCTGGCCGAGGTCGTCGTCGAGACGGCCGCCCGCACCTGATCCTCAAGGGATTCCGCACCGGCGGTCCC GCCACCAGACGGTTCGACCC
Downstream 100 bases:
>100_bases GCGCGATGCGTGAGCCCGCCCCGGGAGGCGTCTCGGGTCGGCCACGCCGTCGGCCGTCCACACTGGGCTGCGCTCTGAGG ATGAACCCGGCGGTGACTCT
Product: UDP-N-acetylmuramate--L-alanine ligase
Products: NA
Alternate protein names: UDP-N-acetylmuramoyl-L-alanine synthetase
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MKLPDKLGPIHFIGIGGIGMSGIAEVMHNLGYTVQGSDASDNANVRRLAEKGMRTFVGHDAKNVEEAALVVVSTAIRRDN PELQAARERRLPVVRRAEMLAELMRFKSCVAIAGTHGKTTTTSLVATLLDAGNLDPTVINGGIINAYGTNARMGAGEWMV VEADESDGTFLKLPADVAIVTNIDPEHLDHFGSFDAIKDAFRRFIDNIPFYGFAVMCIDHPVVQDLVGHIEDRRIITYGE NPQADVRLIDVDLRGGQSRFRVMIRDRRPGYRMEMEDLVLPMPGKHNALNATAALAVAHELGVKPDAIRQALAGFGGVKR RFTRTGEWNGATIFDDYGHHPVEIKAVLKAARASTEHGVIAVVQPHRYTRLQSLFDDFCTCFNDADTVIVAPVYAAGEQP IEGFDRDSLVAGLRSRGHRDARALERPEELAGIIADLAKPGDYVVCLGAGTITQWAYALPDELTARGR
Sequences:
>Translated_468_residues MKLPDKLGPIHFIGIGGIGMSGIAEVMHNLGYTVQGSDASDNANVRRLAEKGMRTFVGHDAKNVEEAALVVVSTAIRRDN PELQAARERRLPVVRRAEMLAELMRFKSCVAIAGTHGKTTTTSLVATLLDAGNLDPTVINGGIINAYGTNARMGAGEWMV VEADESDGTFLKLPADVAIVTNIDPEHLDHFGSFDAIKDAFRRFIDNIPFYGFAVMCIDHPVVQDLVGHIEDRRIITYGE NPQADVRLIDVDLRGGQSRFRVMIRDRRPGYRMEMEDLVLPMPGKHNALNATAALAVAHELGVKPDAIRQALAGFGGVKR RFTRTGEWNGATIFDDYGHHPVEIKAVLKAARASTEHGVIAVVQPHRYTRLQSLFDDFCTCFNDADTVIVAPVYAAGEQP IEGFDRDSLVAGLRSRGHRDARALERPEELAGIIADLAKPGDYVVCLGAGTITQWAYALPDELTARGR >Mature_468_residues MKLPDKLGPIHFIGIGGIGMSGIAEVMHNLGYTVQGSDASDNANVRRLAEKGMRTFVGHDAKNVEEAALVVVSTAIRRDN PELQAARERRLPVVRRAEMLAELMRFKSCVAIAGTHGKTTTTSLVATLLDAGNLDPTVINGGIINAYGTNARMGAGEWMV VEADESDGTFLKLPADVAIVTNIDPEHLDHFGSFDAIKDAFRRFIDNIPFYGFAVMCIDHPVVQDLVGHIEDRRIITYGE NPQADVRLIDVDLRGGQSRFRVMIRDRRPGYRMEMEDLVLPMPGKHNALNATAALAVAHELGVKPDAIRQALAGFGGVKR RFTRTGEWNGATIFDDYGHHPVEIKAVLKAARASTEHGVIAVVQPHRYTRLQSLFDDFCTCFNDADTVIVAPVYAAGEQP IEGFDRDSLVAGLRSRGHRDARALERPEELAGIIADLAKPGDYVVCLGAGTITQWAYALPDELTARGR
Specific function: Cell wall formation
COG id: COG0773
COG function: function code M; UDP-N-acetylmuramate-alanine ligase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family
Homologues:
Organism=Escherichia coli, GI1786279, Length=461, Percent_Identity=45.9869848156182, Blast_Score=338, Evalue=4e-94, Organism=Escherichia coli, GI1790680, Length=457, Percent_Identity=27.3522975929978, Blast_Score=162, Evalue=3e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURC_METRJ (B1LXZ3)
Other databases:
- EMBL: CP001001 - RefSeq: YP_001755033.1 - ProteinModelPortal: B1LXZ3 - SMR: B1LXZ3 - GeneID: 6138387 - GenomeReviews: CP001001_GR - KEGG: mrd:Mrad2831_2355 - HOGENOM: HBG476594 - OMA: YQPHRYS - ProtClustDB: PRK00421 - GO: GO:0005737 - HAMAP: MF_00046 - InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR016040 - InterPro: IPR005758 - Gene3D: G3DSA:3.90.190.20 - Gene3D: G3DSA:3.40.1190.10 - Gene3D: G3DSA:3.40.50.720 - TIGRFAMs: TIGR01082
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M; SSF53244 Mur_ligase_C; SSF53623 Mur_ligase_cen
EC number: =6.3.2.8
Molecular weight: Translated: 51083; Mature: 51083
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLPDKLGPIHFIGIGGIGMSGIAEVMHNLGYTVQGSDASDNANVRRLAEKGMRTFVGHD CCCCCHHCCEEEEEECCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHCCC AKNVEEAALVVVSTAIRRDNPELQAARERRLPVVRRAEMLAELMRFKSCVAIAGTHGKTT CCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEECCCCCCH TTSLVATLLDAGNLDPTVINGGIINAYGTNARMGAGEWMVVEADESDGTFLKLPADVAIV HHHHHHHHHHCCCCCCEEEECCEEEECCCCCCCCCCCEEEEEECCCCCCEEEECCCEEEE TNIDPEHLDHFGSFDAIKDAFRRFIDNIPFYGFAVMCIDHPVVQDLVGHIEDRRIITYGE ECCCHHHHHHCCCHHHHHHHHHHHHHCCCHHHEEEEECCCHHHHHHHHHCCCCEEEEECC NPQADVRLIDVDLRGGQSRFRVMIRDRRPGYRMEMEDLVLPMPGKHNALNATAALAVAHE CCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCHHHEEECCCCCCCCCHHHHHHHHHHH LGVKPDAIRQALAGFGGVKRRFTRTGEWNGATIFDDYGHHPVEIKAVLKAARASTEHGVI HCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCEE AVVQPHRYTRLQSLFDDFCTCFNDADTVIVAPVYAAGEQPIEGFDRDSLVAGLRSRGHRD EEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCH ARALERPEELAGIIADLAKPGDYVVCLGAGTITQWAYALPDELTARGR HHHHCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCHHHHCCCC >Mature Secondary Structure MKLPDKLGPIHFIGIGGIGMSGIAEVMHNLGYTVQGSDASDNANVRRLAEKGMRTFVGHD CCCCCHHCCEEEEEECCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHCCC AKNVEEAALVVVSTAIRRDNPELQAARERRLPVVRRAEMLAELMRFKSCVAIAGTHGKTT CCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEECCCCCCH TTSLVATLLDAGNLDPTVINGGIINAYGTNARMGAGEWMVVEADESDGTFLKLPADVAIV HHHHHHHHHHCCCCCCEEEECCEEEECCCCCCCCCCCEEEEEECCCCCCEEEECCCEEEE TNIDPEHLDHFGSFDAIKDAFRRFIDNIPFYGFAVMCIDHPVVQDLVGHIEDRRIITYGE ECCCHHHHHHCCCHHHHHHHHHHHHHCCCHHHEEEEECCCHHHHHHHHHCCCCEEEEECC NPQADVRLIDVDLRGGQSRFRVMIRDRRPGYRMEMEDLVLPMPGKHNALNATAALAVAHE CCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCHHHEEECCCCCCCCCHHHHHHHHHHH LGVKPDAIRQALAGFGGVKRRFTRTGEWNGATIFDDYGHHPVEIKAVLKAARASTEHGVI HCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCEE AVVQPHRYTRLQSLFDDFCTCFNDADTVIVAPVYAAGEQPIEGFDRDSLVAGLRSRGHRD EEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCH ARALERPEELAGIIADLAKPGDYVVCLGAGTITQWAYALPDELTARGR HHHHCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA