| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is mucR [H]
Identifier: 170748085
GI number: 170748085
Start: 1779997
End: 1780425
Strand: Reverse
Name: mucR [H]
Synonym: Mrad2831_1667
Alternate gene names: 170748085
Gene position: 1780425-1779997 (Counterclockwise)
Preceding gene: 170748087
Following gene: 170748083
Centisome position: 29.29
GC content: 65.73
Gene sequence:
>429_bases ATGAACACCATCGATTTGAACGAAAAGACCTCGGACCCGAACACAGACCTGATCAAGTGCACGGCATCACTGGTTGCGGC CTACGTGTCCCGGAATGCGGTGGGCGTGGGAGACCTGCCGGTTCTGATCGACCAAGTGCACACGGCGATATCGGTCCTGC AGGGCGGCGGTTCGGGATCCGGTCCGGGCTGGACCGGCCCGACGGCGGCGCAGATCGAGGCCTCGATTCAGCAGGACGGC CTGATCAGCTTCATCGACGGCCGGTCCTACAAGACCCTGAAGCGCCACCTCACCGCGCACGGCCTCACGCCGGAGCGGTA CCGGGCGAAGTACGGCCTGCCAGCCGACTACCCGATGGTGGCACCGGGCTACGCCGCCAAGCGTTCGGAGATCGCCAAGG CGATCCAGCTCGGCCACAAGGCGGCCTGA
Upstream 100 bases:
>100_bases GAAGCAGTTTGGTGCATGCTTGGGCGGTAAAAGCTGATCAAGCCTCCAGCTTTATCGATGCACCGTTTTCCATGCCTCGA CTCTCGGTACTGGGGGATCC
Downstream 100 bases:
>100_bases GGAAGCCGGGCCGGCCCGCACCGCCCTGGATCGGCGGCCCCGTCCGGGCCGCCGCGCGACGCGGGCGCGGGATGCCCGAC GGCGGATCGCCCGATCCGCC
Product: MucR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MNTIDLNEKTSDPNTDLIKCTASLVAAYVSRNAVGVGDLPVLIDQVHTAISVLQGGGSGSGPGWTGPTAAQIEASIQQDG LISFIDGRSYKTLKRHLTAHGLTPERYRAKYGLPADYPMVAPGYAAKRSEIAKAIQLGHKAA
Sequences:
>Translated_142_residues MNTIDLNEKTSDPNTDLIKCTASLVAAYVSRNAVGVGDLPVLIDQVHTAISVLQGGGSGSGPGWTGPTAAQIEASIQQDG LISFIDGRSYKTLKRHLTAHGLTPERYRAKYGLPADYPMVAPGYAAKRSEIAKAIQLGHKAA >Mature_142_residues MNTIDLNEKTSDPNTDLIKCTASLVAAYVSRNAVGVGDLPVLIDQVHTAISVLQGGGSGSGPGWTGPTAAQIEASIQQDG LISFIDGRSYKTLKRHLTAHGLTPERYRAKYGLPADYPMVAPGYAAKRSEIAKAIQLGHKAA
Specific function: Regulator of exopolysaccharide synthesis. Represses the activation of EPS II (exp) genes for galactoglucan and activates the EPS I (exo) genes for succinoglycan. Also negatively regulates its own transcription [H]
COG id: COG4957
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ros/mucR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008807 - InterPro: IPR015880 [H]
Pfam domain/function: PF05443 ROS_MUCR [H]
EC number: NA
Molecular weight: Translated: 14946; Mature: 14946
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTIDLNEKTSDPNTDLIKCTASLVAAYVSRNAVGVGDLPVLIDQVHTAISVLQGGGSGS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC GPGWTGPTAAQIEASIQQDGLISFIDGRSYKTLKRHLTAHGLTPERYRAKYGLPADYPMV CCCCCCCCHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCC APGYAAKRSEIAKAIQLGHKAA CCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNTIDLNEKTSDPNTDLIKCTASLVAAYVSRNAVGVGDLPVLIDQVHTAISVLQGGGSGS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC GPGWTGPTAAQIEASIQQDGLISFIDGRSYKTLKRHLTAHGLTPERYRAKYGLPADYPMV CCCCCCCCHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCC APGYAAKRSEIAKAIQLGHKAA CCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7756693; 10656595; 11481430 [H]