Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

Click here to switch to the map view.

The map label for this gene is kdgK [H]

Identifier: 170748083

GI number: 170748083

Start: 1777137

End: 1778072

Strand: Reverse

Name: kdgK [H]

Synonym: Mrad2831_1665

Alternate gene names: 170748083

Gene position: 1778072-1777137 (Counterclockwise)

Preceding gene: 170748085

Following gene: 170748082

Centisome position: 29.26

GC content: 76.28

Gene sequence:

>936_bases
ATGAGGGTCGCCTGCATCGGCGAGTGCATGGTCGAACTGTCCGAACGCCCGGACGGGAATCTGGTCCGGGGCTTCGGCGG
CGACACGCTGAACACCGCGCTCTATCTCGCGCGCCTCGGCGTCGCGGTGGATTACGTGACGGCGCTCGGCGACGACATCT
GGAGCGACGAGATGGCGGCGGCCTGGGGCCGCGAGGGCATCGGCCTCGAGCGGGTCCGGCGCCTGCAGGGCCGGATGCCG
GGCCTCTACATCATCCGCACGGATGCCGACGGCGAGCGCAGCTTCCACTACTGGCGCGACCGGGCCGCGGCCCGCGACCT
CTTCACCGAGCCGGGCGCCGCCGAGACGGAGGCGGAGCTGGAGCGCTACGACCTCGTCTACCTGTCGGGCATCAGCCTCT
CGCTCTACGGCGAGACCGGGCGCGCCGCCCTGTTCGAGACCCTGGCGCGCCTGCGGGACCGGGGCGGCCGGGTCGCCTTC
GACACCAATTACCGCCCCCGCGGCTGGCCCGACCGGGACGAGGCCTGGGCGGCCTTCCGCGCGGCCCTGGCTCTGGCCGA
CGTGATCTTCGCCTCGGCGGAGGACCTGGACTGGCTCTTCGGCGCGGCGGGCGAGGACGAGGTGCTGCGCCACCGCGGCC
GGGCCGAGATCGTGCTCAAGACCTCGGGCGCATCAGGCCCCGTCGCCCGGGTGCTGCACGGCCCGGCCGACACCGCCGTG
CCGGCCGGGCGCGCCGCGCGGGTCGTCGACACGACGGCGGCGGGCGACAGCTTCGCGGCGGGCTACCTCGCGGCGCGCAT
CGCCGGGCTGGCGCCGGAAGCCGCCGCCGCCGAGGCGCACCGCCTGGCCGGGGCGGTGATCGGACATCGCGGCGCCGTGA
TTCCCCGGGACGCGATGCCGGCCCCGGCCGCCCGGCCGCCCGGCCCGGGCGCCTGA

Upstream 100 bases:

>100_bases
CCGGGCGCGCGACAGGACCGGCGAGACCGGGGCCTGTGGACGATTGACAGGTCGGTCCGAACAATGCGGGGAGACGGGGT
CGCGCACCGGGAGGAACCGC

Downstream 100 bases:

>100_bases
GGCCGTCCGGGCCGCCCTTGAGGCGGACAAGCGCAACCGCTACCTCTCTGCCAGCGGGGGACGGCCCCCGCAGCGTCATC
GCCGCCCGTGGCGCGGCCGA

Product: ribokinase-like domain-containing protein

Products: NA

Alternate protein names: 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase [H]

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MRVACIGECMVELSERPDGNLVRGFGGDTLNTALYLARLGVAVDYVTALGDDIWSDEMAAAWGREGIGLERVRRLQGRMP
GLYIIRTDADGERSFHYWRDRAAARDLFTEPGAAETEAELERYDLVYLSGISLSLYGETGRAALFETLARLRDRGGRVAF
DTNYRPRGWPDRDEAWAAFRAALALADVIFASAEDLDWLFGAAGEDEVLRHRGRAEIVLKTSGASGPVARVLHGPADTAV
PAGRAARVVDTTAAGDSFAAGYLAARIAGLAPEAAAAEAHRLAGAVIGHRGAVIPRDAMPAPAARPPGPGA

Sequences:

>Translated_311_residues
MRVACIGECMVELSERPDGNLVRGFGGDTLNTALYLARLGVAVDYVTALGDDIWSDEMAAAWGREGIGLERVRRLQGRMP
GLYIIRTDADGERSFHYWRDRAAARDLFTEPGAAETEAELERYDLVYLSGISLSLYGETGRAALFETLARLRDRGGRVAF
DTNYRPRGWPDRDEAWAAFRAALALADVIFASAEDLDWLFGAAGEDEVLRHRGRAEIVLKTSGASGPVARVLHGPADTAV
PAGRAARVVDTTAAGDSFAAGYLAARIAGLAPEAAAAEAHRLAGAVIGHRGAVIPRDAMPAPAARPPGPGA
>Mature_311_residues
MRVACIGECMVELSERPDGNLVRGFGGDTLNTALYLARLGVAVDYVTALGDDIWSDEMAAAWGREGIGLERVRRLQGRMP
GLYIIRTDADGERSFHYWRDRAAARDLFTEPGAAETEAELERYDLVYLSGISLSLYGETGRAALFETLARLRDRGGRVAF
DTNYRPRGWPDRDEAWAAFRAALALADVIFASAEDLDWLFGAAGEDEVLRHRGRAEIVLKTSGASGPVARVLHGPADTAV
PAGRAARVVDTTAAGDSFAAGYLAARIAGLAPEAAAAEAHRLAGAVIGHRGAVIPRDAMPAPAARPPGPGA

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Escherichia coli, GI87082281, Length=309, Percent_Identity=44.0129449838188, Blast_Score=249, Evalue=1e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: =2.7.1.45 [H]

Molecular weight: Translated: 33143; Mature: 33143

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVACIGECMVELSERPDGNLVRGFGGDTLNTALYLARLGVAVDYVTALGDDIWSDEMAA
CCEEHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHH
AWGREGIGLERVRRLQGRMPGLYIIRTDADGERSFHYWRDRAAARDLFTEPGAAETEAEL
HHCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH
ERYDLVYLSGISLSLYGETGRAALFETLARLRDRGGRVAFDTNYRPRGWPDRDEAWAAFR
HHHCEEEEECCEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHH
AALALADVIFASAEDLDWLFGAAGEDEVLRHRGRAEIVLKTSGASGPVARVLHGPADTAV
HHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHCCCEEEEEEECCCCCCHHHHHCCCCCCCC
PAGRAARVVDTTAAGDSFAAGYLAARIAGLAPEAAAAEAHRLAGAVIGHRGAVIPRDAMP
CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
APAARPPGPGA
CCCCCCCCCCC
>Mature Secondary Structure
MRVACIGECMVELSERPDGNLVRGFGGDTLNTALYLARLGVAVDYVTALGDDIWSDEMAA
CCEEHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHH
AWGREGIGLERVRRLQGRMPGLYIIRTDADGERSFHYWRDRAAARDLFTEPGAAETEAEL
HHCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH
ERYDLVYLSGISLSLYGETGRAALFETLARLRDRGGRVAFDTNYRPRGWPDRDEAWAAFR
HHHCEEEEECCEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHH
AALALADVIFASAEDLDWLFGAAGEDEVLRHRGRAEIVLKTSGASGPVARVLHGPADTAV
HHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHCCCEEEEEEECCCCCCHHHHHCCCCCCCC
PAGRAARVVDTTAAGDSFAAGYLAARIAGLAPEAAAAEAHRLAGAVIGHRGAVIPRDAMP
CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
APAARPPGPGA
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8157608 [H]