Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

Click here to switch to the map view.

The map label for this gene is yitY [H]

Identifier: 170747886

GI number: 170747886

Start: 1532978

End: 1534432

Strand: Reverse

Name: yitY [H]

Synonym: Mrad2831_1468

Alternate gene names: 170747886

Gene position: 1534432-1532978 (Counterclockwise)

Preceding gene: 170747892

Following gene: 170747885

Centisome position: 25.25

GC content: 74.98

Gene sequence:

>1455_bases
ATGGCCGGGACGGGACCGAGCAGGCGCGGGATCCTCGCGGGCGGCGGCGCCGCGGCGGCCGCCGCGCTGCTGCCGCGGGC
GGCACGGGCCGCCCCGCGCACCATCCTGAACGACGCGAGCGGCCTCAACCCGACCCCGGTGACGCGGCACGCCGTCCTCC
CGACGGGCTCGACCGACGTCCTGATCGAGGCCGTGCGCGCCGAGATCCGGGACGCCGCCGCCGCCGGGCGGCCGGTCGCC
GTCGGCGTCGCCCGCCACTCCATGGGCGGACAGAGCCTCGCCCGCGACGGGACTGCCGTGACCCTGGAGGGCGGCCCGAT
CGAGCCCGACACCGCCGCCGGCCTCTACCGGGTCGGGGCCGGCGCGCGCTGGGCGCAGGTCATCCGGCAGCTCGACCGGA
TCGGGTTCTCGCCCGCGGTGATGCAGTCGAACAGCGATTTCGGGGTCGGCTCGACCTTCAGCGTCAACGCCCACGGCTGG
CCCGCGCCCTACGGCCCGTTCGGCTCCACGGTCCGCGCCCTCCGCCTCGTCCTGGCCGACGGCAGCCTCGTGACCTGCTC
CCGCACCGAGAACGCCGAGCTGTTCGGGCTGGCGATGGGCGGCTACGGCCTGTTCGGCGTCCTGGTCGACCTCGTGGTCG
AGATGGTGCCGAACCGCCTCCTGACGCCGACCTTCGCGGTGATGCCGGCCGCCGCCTTCGCCCCGGCCCTCGCGGCGGCG
GTGGCGCGCGACGCGCGGCTGCGCATGGCCTACGGCCGCCTCTCGGTGGCGCGGGCCGGGTTCTTCGACGAGGCGATCCT
CGTCACCTACGCGGAGGCCGAGCACCCGCCGCAGGTCCTGCCCGCGGCGGCCGCGCAGGGAGCGTTCTCGGCCGTCTCGC
GGGAGATCTACCGCGCCCAGGTCGGCAGCGAGCTCGGCAAGCGCGCCCGCTGGATCGCCGAGACCCGGCTCAACCCGGCC
CTGGATCCCGGCCTCGCCACCCGCAACAGCCTGATGAACGAGCCGGTGGCCAACCTCGCCTCGCGCGACCCTGGCCGCAC
CGACATCCTGCACGAGTACTTCGTCCCGCCCGAGCGCTTCGACGCGTTCCTCGCCGCCTGCCGCGAGACCATCCCGCGCT
CGGGCTGCGACTGCCTCAACGTCACCCTGCGCTACGTCGCGGCGGACCCGGATTCGAGGCTGGCCTACGCGCCGGCCCCG
CGCATCGGCGCGGTGATGTCGTTCTCGCAGGGGCTCACCCCCGGCGACGAGGCCGCGATGATGCGCATGACCGAGGCCCT
GATCGAGCGCGTCGTGGCGATCGGCGGGGCCTATTACCTGCCCTACCGCCTGCACGCCCGGCGCGACCAGATGGCCCGGG
CCTATCCCGATCTCGACACCTTCGTGGCGGCCAAGCGCCGCTACGATCCGGGGCTGCTGTTCCGGAACGCCCTGTGGTCG
ACCTACATGGCCTGA

Upstream 100 bases:

>100_bases
GCCGGATCCGGACCCGTCGCAGAGTTCTCCGGCGGGCGATCCGGTCGCCCCATCGGCGCGGATCGAGGGCGGGCATCGAG
GGCGGGCATCGAGGGCGGGC

Downstream 100 bases:

>100_bases
GCGCGAGGATCCGCATGACAGTCTCGCTTCCCCGGGCGGCCGCCCTCGCCTTCGCGGCCATCCTGCTGTTCGCCGCCGCC
ACCGACTACGTCCCGGCCTT

Product: FAD linked oxidase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 484; Mature: 483

Protein sequence:

>484_residues
MAGTGPSRRGILAGGGAAAAAALLPRAARAAPRTILNDASGLNPTPVTRHAVLPTGSTDVLIEAVRAEIRDAAAAGRPVA
VGVARHSMGGQSLARDGTAVTLEGGPIEPDTAAGLYRVGAGARWAQVIRQLDRIGFSPAVMQSNSDFGVGSTFSVNAHGW
PAPYGPFGSTVRALRLVLADGSLVTCSRTENAELFGLAMGGYGLFGVLVDLVVEMVPNRLLTPTFAVMPAAAFAPALAAA
VARDARLRMAYGRLSVARAGFFDEAILVTYAEAEHPPQVLPAAAAQGAFSAVSREIYRAQVGSELGKRARWIAETRLNPA
LDPGLATRNSLMNEPVANLASRDPGRTDILHEYFVPPERFDAFLAACRETIPRSGCDCLNVTLRYVAADPDSRLAYAPAP
RIGAVMSFSQGLTPGDEAAMMRMTEALIERVVAIGGAYYLPYRLHARRDQMARAYPDLDTFVAAKRRYDPGLLFRNALWS
TYMA

Sequences:

>Translated_484_residues
MAGTGPSRRGILAGGGAAAAAALLPRAARAAPRTILNDASGLNPTPVTRHAVLPTGSTDVLIEAVRAEIRDAAAAGRPVA
VGVARHSMGGQSLARDGTAVTLEGGPIEPDTAAGLYRVGAGARWAQVIRQLDRIGFSPAVMQSNSDFGVGSTFSVNAHGW
PAPYGPFGSTVRALRLVLADGSLVTCSRTENAELFGLAMGGYGLFGVLVDLVVEMVPNRLLTPTFAVMPAAAFAPALAAA
VARDARLRMAYGRLSVARAGFFDEAILVTYAEAEHPPQVLPAAAAQGAFSAVSREIYRAQVGSELGKRARWIAETRLNPA
LDPGLATRNSLMNEPVANLASRDPGRTDILHEYFVPPERFDAFLAACRETIPRSGCDCLNVTLRYVAADPDSRLAYAPAP
RIGAVMSFSQGLTPGDEAAMMRMTEALIERVVAIGGAYYLPYRLHARRDQMARAYPDLDTFVAAKRRYDPGLLFRNALWS
TYMA
>Mature_483_residues
AGTGPSRRGILAGGGAAAAAALLPRAARAAPRTILNDASGLNPTPVTRHAVLPTGSTDVLIEAVRAEIRDAAAAGRPVAV
GVARHSMGGQSLARDGTAVTLEGGPIEPDTAAGLYRVGAGARWAQVIRQLDRIGFSPAVMQSNSDFGVGSTFSVNAHGWP
APYGPFGSTVRALRLVLADGSLVTCSRTENAELFGLAMGGYGLFGVLVDLVVEMVPNRLLTPTFAVMPAAAFAPALAAAV
ARDARLRMAYGRLSVARAGFFDEAILVTYAEAEHPPQVLPAAAAQGAFSAVSREIYRAQVGSELGKRARWIAETRLNPAL
DPGLATRNSLMNEPVANLASRDPGRTDILHEYFVPPERFDAFLAACRETIPRSGCDCLNVTLRYVAADPDSRLAYAPAPR
IGAVMSFSQGLTPGDEAAMMRMTEALIERVVAIGGAYYLPYRLHARRDQMARAYPDLDTFVAAKRRYDPGLLFRNALWST
YMA

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007173
- InterPro:   IPR016166
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR006094 [H]

Pfam domain/function: PF04030 ALO; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 51219; Mature: 51088

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGTGPSRRGILAGGGAAAAAALLPRAARAAPRTILNDASGLNPTPVTRHAVLPTGSTDV
CCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCEEECCCCCHHH
LIEAVRAEIRDAAAAGRPVAVGVARHSMGGQSLARDGTAVTLEGGPIEPDTAAGLYRVGA
HHHHHHHHHHHHHHCCCCEEEEHHHHCCCCHHHHCCCCEEEECCCCCCCCHHCCHHHCCC
GARWAQVIRQLDRIGFSPAVMQSNSDFGVGSTFSVNAHGWPAPYGPFGSTVRALRLVLAD
CHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCC
GSLVTCSRTENAELFGLAMGGYGLFGVLVDLVVEMVPNRLLTPTFAVMPAAAFAPALAAA
CCEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHH
VARDARLRMAYGRLSVARAGFFDEAILVTYAEAEHPPQVLPAAAAQGAFSAVSREIYRAQ
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VGSELGKRARWIAETRLNPALDPGLATRNSLMNEPVANLASRDPGRTDILHEYFVPPERF
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCCHHHHHHHCCCHHHH
DAFLAACRETIPRSGCDCLNVTLRYVAADPDSRLAYAPAPRIGAVMSFSQGLTPGDEAAM
HHHHHHHHHHCCCCCCHHHHEEEEEEECCCCCCEEECCCCCHHHHHHHHCCCCCCHHHHH
MRMTEALIERVVAIGGAYYLPYRLHARRDQMARAYPDLDTFVAAKRRYDPGLLFRNALWS
HHHHHHHHHHHHHHCCCEEECEEHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHH
TYMA
HHCC
>Mature Secondary Structure 
AGTGPSRRGILAGGGAAAAAALLPRAARAAPRTILNDASGLNPTPVTRHAVLPTGSTDV
CCCCCCCCCEEECCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCEEECCCCCHHH
LIEAVRAEIRDAAAAGRPVAVGVARHSMGGQSLARDGTAVTLEGGPIEPDTAAGLYRVGA
HHHHHHHHHHHHHHCCCCEEEEHHHHCCCCHHHHCCCCEEEECCCCCCCCHHCCHHHCCC
GARWAQVIRQLDRIGFSPAVMQSNSDFGVGSTFSVNAHGWPAPYGPFGSTVRALRLVLAD
CHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCC
GSLVTCSRTENAELFGLAMGGYGLFGVLVDLVVEMVPNRLLTPTFAVMPAAAFAPALAAA
CCEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHH
VARDARLRMAYGRLSVARAGFFDEAILVTYAEAEHPPQVLPAAAAQGAFSAVSREIYRAQ
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VGSELGKRARWIAETRLNPALDPGLATRNSLMNEPVANLASRDPGRTDILHEYFVPPERF
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCCHHHHHHHCCCHHHH
DAFLAACRETIPRSGCDCLNVTLRYVAADPDSRLAYAPAPRIGAVMSFSQGLTPGDEAAM
HHHHHHHHHHCCCCCCHHHHEEEEEEECCCCCCEEECCCCCHHHHHHHHCCCCCCHHHHH
MRMTEALIERVVAIGGAYYLPYRLHARRDQMARAYPDLDTFVAAKRRYDPGLLFRNALWS
HHHHHHHHHHHHHHCCCEEECEEHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHH
TYMA
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9025291; 9353931; 9384377 [H]