| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170747808
Identifier: 170747808
GI number: 170747808
Start: 1451379
End: 1453043
Strand: Reverse
Name: 170747808
Synonym: Mrad2831_1390
Alternate gene names: NA
Gene position: 1453043-1451379 (Counterclockwise)
Preceding gene: 170747809
Following gene: 170747807
Centisome position: 23.91
GC content: 73.09
Gene sequence:
>1665_bases ATGAACTTCGTCCATCGCTACCTCGGCGAGAGCCGGGCCGTCTCGGACGCGGACGCGACCCGGCTCGGCTTCGTCCCCGA CACCTTGCGCGAGCCGACCTACTTCGCCGGGACCGTGGCGCGGCACCTGCCGTTCCGGGAGGCGATCTCGGCCCTGCACC ACGTCGTCGTGTCGGACCTGCGCTTCGCGCCGAAGGACCGCACCGCCTACTTCGCGTGGCTCCAGGCCCACGAGCAGGAG CTCCTGGCCGAGGCCCTCGCCGAGAAGGACAGCCTGCGCGCCGAGATCGAGGCGCTGCGCGCCGAGAGCCGGGACATCGC GGCCCGCTCCGACGCCGTGATGCGGCCGTTCTACGACGCGCGGAAGCGGTACTTCGACCACCTCTACCGGGAGAACCTCG ACGCCTGGATCGTGCTGGACCCGGTCATCACGGTCCATCCGGACGAGATCTTCTTCGAGGCGTTCAGCCTCGACGAATCG AGCTACGGGCGCCTGTCCTGCGACCACGACACGTTCGCGCGGATCGGCGACATGGCCTGCGGCACGACCAACATCGACTA CAGCCACGCCCTCTACGACGAGTTCCAGAAGATCCGCAGCTACCGCGACACGGAGCTGGCGATCGACCCGACCGGCTTCG CGGTCCAGACCTCCGGCGAGGCCGCCTACCGCGAGGACAAGATCGAGCTGCCGGATTCCTGGATGCGGGGCTTCCTGCAG GTGTCGAGCGCCATGGCGCAGCCCGCCCACGTGGTGGATCTGCACCCGGTCGACATGCACGCGATCCTGACCCGCCTCGC CGCGCGCCGGGAGCGCCACGGCCCGCGCTCCCTCCGGTTCCTGCTCGAGCCCGACCGGCCGGTCAGCGTGCTGATCGAGC CCTGGAACGAGCGGCTGACTTTCCGGCGCTCGATCTACCGCGGGGGCGAGGCCGCGGAGATCCGCCTGTGGGGGCGGCGG CGCCTCGCGATCCTGGCCCGGACCCTGCCGCTCGCCCGGTCGGTGCGGCTGCACCTCCTCGGCACCGGGCTTCCGAGCTT CGCGGTCGTGGATTTCGGGGGCCTGCGCTTCACCCTCGGCCTGTCGGGCTGGACCGCCAACGACTGGTCCCGGGCCGGGC AGTTCGACCTGCTCGCGCCCCGGGCGGAGGTCGACGCCGGCACCGCCGCCCGGGTCTTCGCGGCGCTCCGGCGCCACCAC GCCGCCGGGACCGGGCCGCTCGCCGCCGAGACCGGCCTCGACCGGGCGACCGTGGAGGCGGCCCTCGGCGGCTACGTGCA GGCCGGCCGCGCCATGTTCGACCTCGACAAGCGGGTCTACCGCCTGCGGGAGCTGACCCGGGAGCCGCTGGCGCCGGGCG CCCTGCGCTTCGCCTCCGAGCAGGAGGCCAAGGCCGACCGGTTCCTGGCGGCCGGGCTGGTCACCCTCGGGCCCGTCGAG CCGGCGGGCGACAGGCGGCGCCTGAGCGGGACCGTGCTGGACGACGGCCGGAGCCTGACGCCCGCGGTGGAGCTCGATCT CGACGACCGCATGGTCGGCGGCACCTGCCAGTGCGGCTTCTACACCCACAACCGGCTGACCCGCGGCCCCTGCGAGCACA TGCTGGCCGTGCGGCGCTTCTTCCACGCCCAGGTCGAGGGCATGCCCGCGCGGTGGCAGGCGTGA
Upstream 100 bases:
>100_bases CCCTGCGCGACGTCGCCGACGCGCATCCCGATCTCGCCGTGCCCCTCGTCCGGTGCCCGCCGGAGCCGCGGGGACCCGTC TCCGTCTCGGAAGGGGCTCG
Downstream 100 bases:
>100_bases GGCGGGCCCGATTGATGCGGCCGCGCGCCTGGCCTATCCTGACCGCGACGAGGGGCGCCGGCCGGGGCGGACCTTGCATT TCGGGCGGCGATTCGCCGTC
Product: zinc finger SWIM domain-containing protein
Products: NA
Alternate protein names: Zinc Finger SWIM Domain-Containing Protein; Swim Zinc Finger Domain Protein; Zinc Finger SWIM Domain Protein; Zinc Finger SWIM-Type; SWIM Zinc Finger
Number of amino acids: Translated: 554; Mature: 554
Protein sequence:
>554_residues MNFVHRYLGESRAVSDADATRLGFVPDTLREPTYFAGTVARHLPFREAISALHHVVVSDLRFAPKDRTAYFAWLQAHEQE LLAEALAEKDSLRAEIEALRAESRDIAARSDAVMRPFYDARKRYFDHLYRENLDAWIVLDPVITVHPDEIFFEAFSLDES SYGRLSCDHDTFARIGDMACGTTNIDYSHALYDEFQKIRSYRDTELAIDPTGFAVQTSGEAAYREDKIELPDSWMRGFLQ VSSAMAQPAHVVDLHPVDMHAILTRLAARRERHGPRSLRFLLEPDRPVSVLIEPWNERLTFRRSIYRGGEAAEIRLWGRR RLAILARTLPLARSVRLHLLGTGLPSFAVVDFGGLRFTLGLSGWTANDWSRAGQFDLLAPRAEVDAGTAARVFAALRRHH AAGTGPLAAETGLDRATVEAALGGYVQAGRAMFDLDKRVYRLRELTREPLAPGALRFASEQEAKADRFLAAGLVTLGPVE PAGDRRRLSGTVLDDGRSLTPAVELDLDDRMVGGTCQCGFYTHNRLTRGPCEHMLAVRRFFHAQVEGMPARWQA
Sequences:
>Translated_554_residues MNFVHRYLGESRAVSDADATRLGFVPDTLREPTYFAGTVARHLPFREAISALHHVVVSDLRFAPKDRTAYFAWLQAHEQE LLAEALAEKDSLRAEIEALRAESRDIAARSDAVMRPFYDARKRYFDHLYRENLDAWIVLDPVITVHPDEIFFEAFSLDES SYGRLSCDHDTFARIGDMACGTTNIDYSHALYDEFQKIRSYRDTELAIDPTGFAVQTSGEAAYREDKIELPDSWMRGFLQ VSSAMAQPAHVVDLHPVDMHAILTRLAARRERHGPRSLRFLLEPDRPVSVLIEPWNERLTFRRSIYRGGEAAEIRLWGRR RLAILARTLPLARSVRLHLLGTGLPSFAVVDFGGLRFTLGLSGWTANDWSRAGQFDLLAPRAEVDAGTAARVFAALRRHH AAGTGPLAAETGLDRATVEAALGGYVQAGRAMFDLDKRVYRLRELTREPLAPGALRFASEQEAKADRFLAAGLVTLGPVE PAGDRRRLSGTVLDDGRSLTPAVELDLDDRMVGGTCQCGFYTHNRLTRGPCEHMLAVRRFFHAQVEGMPARWQA >Mature_554_residues MNFVHRYLGESRAVSDADATRLGFVPDTLREPTYFAGTVARHLPFREAISALHHVVVSDLRFAPKDRTAYFAWLQAHEQE LLAEALAEKDSLRAEIEALRAESRDIAARSDAVMRPFYDARKRYFDHLYRENLDAWIVLDPVITVHPDEIFFEAFSLDES SYGRLSCDHDTFARIGDMACGTTNIDYSHALYDEFQKIRSYRDTELAIDPTGFAVQTSGEAAYREDKIELPDSWMRGFLQ VSSAMAQPAHVVDLHPVDMHAILTRLAARRERHGPRSLRFLLEPDRPVSVLIEPWNERLTFRRSIYRGGEAAEIRLWGRR RLAILARTLPLARSVRLHLLGTGLPSFAVVDFGGLRFTLGLSGWTANDWSRAGQFDLLAPRAEVDAGTAARVFAALRRHH AAGTGPLAAETGLDRATVEAALGGYVQAGRAMFDLDKRVYRLRELTREPLAPGALRFASEQEAKADRFLAAGLVTLGPVE PAGDRRRLSGTVLDDGRSLTPAVELDLDDRMVGGTCQCGFYTHNRLTRGPCEHMLAVRRFFHAQVEGMPARWQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62140; Mature: 62140
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: PS50966 ZF_SWIM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFVHRYLGESRAVSDADATRLGFVPDTLREPTYFAGTVARHLPFREAISALHHVVVSDL CCHHHHHCCCCCCCCCCCCCEECCCCHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH RFAPKDRTAYFAWLQAHEQELLAEALAEKDSLRAEIEALRAESRDIAARSDAVMRPFYDA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHH RKRYFDHLYRENLDAWIVLDPVITVHPDEIFFEAFSLDESSYGRLSCDHDTFARIGDMAC HHHHHHHHHHCCCCEEEEECCEEEECCHHHHHHHHCCCCCCCCCEECCCHHHHHHHCCCC GTTNIDYSHALYDEFQKIRSYRDTELAIDPTGFAVQTSGEAAYREDKIELPDSWMRGFLQ CCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCHHHCCCCCCCCHHHHHHHHH VSSAMAQPAHVVDLHPVDMHAILTRLAARRERHGPRSLRFLLEPDRPVSVLIEPWNERLT HHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCHHHHH FRRSIYRGGEAAEIRLWGRRRLAILARTLPLARSVRLHLLGTGLPSFAVVDFGGLRFTLG HHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEECCCEEEEEE LSGWTANDWSRAGQFDLLAPRAEVDAGTAARVFAALRRHHAAGTGPLAAETGLDRATVEA ECCCCCCCHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHH ALGGYVQAGRAMFDLDKRVYRLRELTREPLAPGALRFASEQEAKADRFLAAGLVTLGPVE HHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCC PAGDRRRLSGTVLDDGRSLTPAVELDLDDRMVGGTCQCGFYTHNRLTRGPCEHMLAVRRF CCCCCHHCCCEEECCCCCCCCEEEECCCCCCCCCEEEECEEECCCCCCCHHHHHHHHHHH FHAQVEGMPARWQA HHHHHCCCCCCCCC >Mature Secondary Structure MNFVHRYLGESRAVSDADATRLGFVPDTLREPTYFAGTVARHLPFREAISALHHVVVSDL CCHHHHHCCCCCCCCCCCCCEECCCCHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH RFAPKDRTAYFAWLQAHEQELLAEALAEKDSLRAEIEALRAESRDIAARSDAVMRPFYDA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHH RKRYFDHLYRENLDAWIVLDPVITVHPDEIFFEAFSLDESSYGRLSCDHDTFARIGDMAC HHHHHHHHHHCCCCEEEEECCEEEECCHHHHHHHHCCCCCCCCCEECCCHHHHHHHCCCC GTTNIDYSHALYDEFQKIRSYRDTELAIDPTGFAVQTSGEAAYREDKIELPDSWMRGFLQ CCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCHHHCCCCCCCCHHHHHHHHH VSSAMAQPAHVVDLHPVDMHAILTRLAARRERHGPRSLRFLLEPDRPVSVLIEPWNERLT HHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCHHHHH FRRSIYRGGEAAEIRLWGRRRLAILARTLPLARSVRLHLLGTGLPSFAVVDFGGLRFTLG HHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEECCCEEEEEE LSGWTANDWSRAGQFDLLAPRAEVDAGTAARVFAALRRHHAAGTGPLAAETGLDRATVEA ECCCCCCCHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHH ALGGYVQAGRAMFDLDKRVYRLRELTREPLAPGALRFASEQEAKADRFLAAGLVTLGPVE HHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCC PAGDRRRLSGTVLDDGRSLTPAVELDLDDRMVGGTCQCGFYTHNRLTRGPCEHMLAVRRF CCCCCHHCCCEEECCCCCCCCEEEECCCCCCCCCEEEECEEECCCCCCCHHHHHHHHHHH FHAQVEGMPARWQA HHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA