| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is ubiE [H]
Identifier: 170747483
GI number: 170747483
Start: 1108582
End: 1109361
Strand: Reverse
Name: ubiE [H]
Synonym: Mrad2831_1051
Alternate gene names: 170747483
Gene position: 1109361-1108582 (Counterclockwise)
Preceding gene: 170747486
Following gene: 170747480
Centisome position: 18.25
GC content: 74.74
Gene sequence:
>780_bases ATGCGCGAGTTCGAGAACCCGGATCGGTGGGACAAGGTCGCCGAGCACTACGCGACGACCGCCCACCCGTTCACGGCGCG CTTCGCCGAGGCGGCGCTCGCGCGAGTGCCGCTGACCGAAAGCAGCCGCGTCCTCGACGTCGCGGCCGGCACCGGCGCCC TCGCGCTGGCCGCGGCGCGGACGGGGGCGCAGGTCCTGGCGGTCGACTTCTCGCCGGGCATGGTCGCGCGCGTCGCCGGG GCGGGCTCGGCCAATGTCGAGGCGCGGGTCATGGACGGCCAGGCGCTCGCCCTTCCCGACGGCGGCTTCGACGCGGTGTT CTCGATCTTCGGGGTGATCATGTTCCCCGACTGGCGGAAGGGGCTCGCCGAGATGGCGCGCGTGACGCGGCCCGGGGGCT GGGGCATCGTCGCGACGTGGCAGGATCAGGGCGCGGCGACGTTCCTGCTGCTCGGCGAGATCCGCCGCCGGCTGTTCCCC GAGCGCGAGAGCCGGGCGATGCCCGAAGGGGTGCGGGTGCTCGGCGATCCGGCCGGGTTCACCCGGGAGATGGTCGCGGC CGGATATGGACCGCCCCGGATCGAACGCGTGACCTTCGACTACGCCCTCGACGTCGCCCTGCTGGACGACCCCGACACGG TGTTCGGCCTGTCGCCGGACTGGGTCGACCTGAGTGCGGACGACCGGGCCGCGGTGACCGCGGAGGCGCGGCGCGTGGCG GGCGGCCGGCCCGTCCTGCCGATCCCCTCCACCGCGCTGATCGCCGTCGCGGAGCGGTGA
Upstream 100 bases:
>100_bases TGTCGGTGCGCACCCGTCGATCCATCACACCGAACTCGGGATTGGCAACCGCGCGCCATCACGATACTTATCAAGTTGCG TGATGGCGAGGGTCGTGGCG
Downstream 100 bases:
>100_bases GCGCCGCTTCGGTGCGAGACCTCCCGCCTCAACTGGACCCCTGCGCGTCCGCCAAGCGCGCCCGCGCGTCGTCCAGAACC CGGGTCAGGGCCGCGTCCCA
Product: type 11 methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MREFENPDRWDKVAEHYATTAHPFTARFAEAALARVPLTESSRVLDVAAGTGALALAAARTGAQVLAVDFSPGMVARVAG AGSANVEARVMDGQALALPDGGFDAVFSIFGVIMFPDWRKGLAEMARVTRPGGWGIVATWQDQGAATFLLLGEIRRRLFP ERESRAMPEGVRVLGDPAGFTREMVAAGYGPPRIERVTFDYALDVALLDDPDTVFGLSPDWVDLSADDRAAVTAEARRVA GGRPVLPIPSTALIAVAER
Sequences:
>Translated_259_residues MREFENPDRWDKVAEHYATTAHPFTARFAEAALARVPLTESSRVLDVAAGTGALALAAARTGAQVLAVDFSPGMVARVAG AGSANVEARVMDGQALALPDGGFDAVFSIFGVIMFPDWRKGLAEMARVTRPGGWGIVATWQDQGAATFLLLGEIRRRLFP ERESRAMPEGVRVLGDPAGFTREMVAAGYGPPRIERVTFDYALDVALLDDPDTVFGLSPDWVDLSADDRAAVTAEARRVA GGRPVLPIPSTALIAVAER >Mature_259_residues MREFENPDRWDKVAEHYATTAHPFTARFAEAALARVPLTESSRVLDVAAGTGALALAAARTGAQVLAVDFSPGMVARVAG AGSANVEARVMDGQALALPDGGFDAVFSIFGVIMFPDWRKGLAEMARVTRPGGWGIVATWQDQGAATFLLLGEIRRRLFP ERESRAMPEGVRVLGDPAGFTREMVAAGYGPPRIERVTFDYALDVALLDDPDTVFGLSPDWVDLSADDRAAVTAEARRVA GGRPVLPIPSTALIAVAER
Specific function: Methyltransferase required for the conversion of dimethylmenaquinone (DMKH2) to menaquinone (MKH2) [H]
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004033 [H]
Pfam domain/function: PF01209 Ubie_methyltran [H]
EC number: NA
Molecular weight: Translated: 27635; Mature: 27635
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREFENPDRWDKVAEHYATTAHPFTARFAEAALARVPLTESSRVLDVAAGTGALALAAAR CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHEEEECC TGAQVLAVDFSPGMVARVAGAGSANVEARVMDGQALALPDGGFDAVFSIFGVIMFPDWRK CCCEEEEEECCCCEEEEEECCCCCCEEEEEECCCEEECCCCCHHHHHHHHHHEECCHHHH GLAEMARVTRPGGWGIVATWQDQGAATFLLLGEIRRRLFPERESRAMPEGVRVLGDPAGF HHHHHHHHCCCCCCEEEEEECCCCCEEEHHHHHHHHHHCCCHHHCCCCCCCEEEECCCCH TREMVAAGYGPPRIERVTFDYALDVALLDDPDTVFGLSPDWVDLSADDRAAVTAEARRVA HHHHHHCCCCCCCEEEEEEEEEEEEEEECCCCCEECCCCCEEECCCCCCHHHHHHHHHHC GGRPVLPIPSTALIAVAER CCCCCCCCCCCEEEEEECC >Mature Secondary Structure MREFENPDRWDKVAEHYATTAHPFTARFAEAALARVPLTESSRVLDVAAGTGALALAAAR CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHEEEECC TGAQVLAVDFSPGMVARVAGAGSANVEARVMDGQALALPDGGFDAVFSIFGVIMFPDWRK CCCEEEEEECCCCEEEEEECCCCCCEEEEEECCCEEECCCCCHHHHHHHHHHEECCHHHH GLAEMARVTRPGGWGIVATWQDQGAATFLLLGEIRRRLFPERESRAMPEGVRVLGDPAGF HHHHHHHHCCCCCCEEEEEECCCCCEEEHHHHHHHHHHCCCHHHCCCCCCCEEEECCCCH TREMVAAGYGPPRIERVTFDYALDVALLDDPDTVFGLSPDWVDLSADDRAAVTAEARRVA HHHHHHCCCCCCCEEEEEEEEEEEEEEECCCCCEECCCCCEEECCCCCCHHHHHHHHHHC GGRPVLPIPSTALIAVAER CCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12840036 [H]