Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

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The map label for this gene is ubiE [H]

Identifier: 170747483

GI number: 170747483

Start: 1108582

End: 1109361

Strand: Reverse

Name: ubiE [H]

Synonym: Mrad2831_1051

Alternate gene names: 170747483

Gene position: 1109361-1108582 (Counterclockwise)

Preceding gene: 170747486

Following gene: 170747480

Centisome position: 18.25

GC content: 74.74

Gene sequence:

>780_bases
ATGCGCGAGTTCGAGAACCCGGATCGGTGGGACAAGGTCGCCGAGCACTACGCGACGACCGCCCACCCGTTCACGGCGCG
CTTCGCCGAGGCGGCGCTCGCGCGAGTGCCGCTGACCGAAAGCAGCCGCGTCCTCGACGTCGCGGCCGGCACCGGCGCCC
TCGCGCTGGCCGCGGCGCGGACGGGGGCGCAGGTCCTGGCGGTCGACTTCTCGCCGGGCATGGTCGCGCGCGTCGCCGGG
GCGGGCTCGGCCAATGTCGAGGCGCGGGTCATGGACGGCCAGGCGCTCGCCCTTCCCGACGGCGGCTTCGACGCGGTGTT
CTCGATCTTCGGGGTGATCATGTTCCCCGACTGGCGGAAGGGGCTCGCCGAGATGGCGCGCGTGACGCGGCCCGGGGGCT
GGGGCATCGTCGCGACGTGGCAGGATCAGGGCGCGGCGACGTTCCTGCTGCTCGGCGAGATCCGCCGCCGGCTGTTCCCC
GAGCGCGAGAGCCGGGCGATGCCCGAAGGGGTGCGGGTGCTCGGCGATCCGGCCGGGTTCACCCGGGAGATGGTCGCGGC
CGGATATGGACCGCCCCGGATCGAACGCGTGACCTTCGACTACGCCCTCGACGTCGCCCTGCTGGACGACCCCGACACGG
TGTTCGGCCTGTCGCCGGACTGGGTCGACCTGAGTGCGGACGACCGGGCCGCGGTGACCGCGGAGGCGCGGCGCGTGGCG
GGCGGCCGGCCCGTCCTGCCGATCCCCTCCACCGCGCTGATCGCCGTCGCGGAGCGGTGA

Upstream 100 bases:

>100_bases
TGTCGGTGCGCACCCGTCGATCCATCACACCGAACTCGGGATTGGCAACCGCGCGCCATCACGATACTTATCAAGTTGCG
TGATGGCGAGGGTCGTGGCG

Downstream 100 bases:

>100_bases
GCGCCGCTTCGGTGCGAGACCTCCCGCCTCAACTGGACCCCTGCGCGTCCGCCAAGCGCGCCCGCGCGTCGTCCAGAACC
CGGGTCAGGGCCGCGTCCCA

Product: type 11 methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MREFENPDRWDKVAEHYATTAHPFTARFAEAALARVPLTESSRVLDVAAGTGALALAAARTGAQVLAVDFSPGMVARVAG
AGSANVEARVMDGQALALPDGGFDAVFSIFGVIMFPDWRKGLAEMARVTRPGGWGIVATWQDQGAATFLLLGEIRRRLFP
ERESRAMPEGVRVLGDPAGFTREMVAAGYGPPRIERVTFDYALDVALLDDPDTVFGLSPDWVDLSADDRAAVTAEARRVA
GGRPVLPIPSTALIAVAER

Sequences:

>Translated_259_residues
MREFENPDRWDKVAEHYATTAHPFTARFAEAALARVPLTESSRVLDVAAGTGALALAAARTGAQVLAVDFSPGMVARVAG
AGSANVEARVMDGQALALPDGGFDAVFSIFGVIMFPDWRKGLAEMARVTRPGGWGIVATWQDQGAATFLLLGEIRRRLFP
ERESRAMPEGVRVLGDPAGFTREMVAAGYGPPRIERVTFDYALDVALLDDPDTVFGLSPDWVDLSADDRAAVTAEARRVA
GGRPVLPIPSTALIAVAER
>Mature_259_residues
MREFENPDRWDKVAEHYATTAHPFTARFAEAALARVPLTESSRVLDVAAGTGALALAAARTGAQVLAVDFSPGMVARVAG
AGSANVEARVMDGQALALPDGGFDAVFSIFGVIMFPDWRKGLAEMARVTRPGGWGIVATWQDQGAATFLLLGEIRRRLFP
ERESRAMPEGVRVLGDPAGFTREMVAAGYGPPRIERVTFDYALDVALLDDPDTVFGLSPDWVDLSADDRAAVTAEARRVA
GGRPVLPIPSTALIAVAER

Specific function: Methyltransferase required for the conversion of dimethylmenaquinone (DMKH2) to menaquinone (MKH2) [H]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. UbiE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004033 [H]

Pfam domain/function: PF01209 Ubie_methyltran [H]

EC number: NA

Molecular weight: Translated: 27635; Mature: 27635

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREFENPDRWDKVAEHYATTAHPFTARFAEAALARVPLTESSRVLDVAAGTGALALAAAR
CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHEEEECC
TGAQVLAVDFSPGMVARVAGAGSANVEARVMDGQALALPDGGFDAVFSIFGVIMFPDWRK
CCCEEEEEECCCCEEEEEECCCCCCEEEEEECCCEEECCCCCHHHHHHHHHHEECCHHHH
GLAEMARVTRPGGWGIVATWQDQGAATFLLLGEIRRRLFPERESRAMPEGVRVLGDPAGF
HHHHHHHHCCCCCCEEEEEECCCCCEEEHHHHHHHHHHCCCHHHCCCCCCCEEEECCCCH
TREMVAAGYGPPRIERVTFDYALDVALLDDPDTVFGLSPDWVDLSADDRAAVTAEARRVA
HHHHHHCCCCCCCEEEEEEEEEEEEEEECCCCCEECCCCCEEECCCCCCHHHHHHHHHHC
GGRPVLPIPSTALIAVAER
CCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MREFENPDRWDKVAEHYATTAHPFTARFAEAALARVPLTESSRVLDVAAGTGALALAAAR
CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHEEEECC
TGAQVLAVDFSPGMVARVAGAGSANVEARVMDGQALALPDGGFDAVFSIFGVIMFPDWRK
CCCEEEEEECCCCEEEEEECCCCCCEEEEEECCCEEECCCCCHHHHHHHHHHEECCHHHH
GLAEMARVTRPGGWGIVATWQDQGAATFLLLGEIRRRLFPERESRAMPEGVRVLGDPAGF
HHHHHHHHCCCCCCEEEEEECCCCCEEEHHHHHHHHHHCCCHHHCCCCCCCEEEECCCCH
TREMVAAGYGPPRIERVTFDYALDVALLDDPDTVFGLSPDWVDLSADDRAAVTAEARRVA
HHHHHHCCCCCCCEEEEEEEEEEEEEEECCCCCEECCCCCEEECCCCCCHHHHHHHHHHC
GGRPVLPIPSTALIAVAER
CCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12840036 [H]