| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is fbp [H]
Identifier: 170747233
GI number: 170747233
Start: 841287
End: 841703
Strand: Reverse
Name: fbp [H]
Synonym: Mrad2831_0799
Alternate gene names: 170747233
Gene position: 841703-841287 (Counterclockwise)
Preceding gene: 170747234
Following gene: 170747232
Centisome position: 13.85
GC content: 69.54
Gene sequence:
>417_bases ATGCCTCGCCTGTCCCCCCTCTTCGGAGCCGCGTTGATCGCCATGACCACTGCCGCCAATGCCGAGACCGTGACCACCCC GTCGGGCCTCAAGTATCAGGACGAGGTCGTCGGCACCGGGCCTGAGCCGAAGGCCGGCCAGACGGTCACCGTCCAGTACA CCGGCTGGCTCGACGAGGGCGGCAAGAAGGGCAAGAAGTTCGACTCGTCCCGCGACCGCAACCAGCCCTTCAGCTTCCCC CTGGGCGCCGGCCAGGTGATCAAGGGCTGGGACGAGGGCGTCGCCACCATGAAGGCCGGCGGCAAGCGCACCCTGATCAT CCCGCCGCAGCTCGGCTACGGCGCCCGGGGCGCCGGCGGCGTGATCCCGCCGAACGCCACGCTGATCTTCGACGTCGAGC TCCTCGGCGCGAAGTAA
Upstream 100 bases:
>100_bases CCGGGGGGCACCAACCGTCTCTCCCTGGCCTGGACGGGTCCGAGGCGATAGAAGGCCTCCCGACGGCCGGCGCGCACGGC GCCGGCTCCAGGGAGAAACC
Downstream 100 bases:
>100_bases GGCAACGATCGGGGCTCGGGCTGCGCGACGGCGAGAGTTCACAGTACCATGCTGTTCGCGCAGCTGTCCGACGAGCTGTT CAAGCCGCTGGCCTCGCCGA
Product: FKBP-type peptidylprolyl isomerase
Products: NA
Alternate protein names: Peptidyl-prolyl cis-trans isomerase; PPIase; Rotamase [H]
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MPRLSPLFGAALIAMTTAANAETVTTPSGLKYQDEVVGTGPEPKAGQTVTVQYTGWLDEGGKKGKKFDSSRDRNQPFSFP LGAGQVIKGWDEGVATMKAGGKRTLIIPPQLGYGARGAGGVIPPNATLIFDVELLGAK
Sequences:
>Translated_138_residues MPRLSPLFGAALIAMTTAANAETVTTPSGLKYQDEVVGTGPEPKAGQTVTVQYTGWLDEGGKKGKKFDSSRDRNQPFSFP LGAGQVIKGWDEGVATMKAGGKRTLIIPPQLGYGARGAGGVIPPNATLIFDVELLGAK >Mature_137_residues PRLSPLFGAALIAMTTAANAETVTTPSGLKYQDEVVGTGPEPKAGQTVTVQYTGWLDEGGKKGKKFDSSRDRNQPFSFPL GAGQVIKGWDEGVATMKAGGKRTLIIPPQLGYGARGAGGVIPPNATLIFDVELLGAK
Specific function: PPIases accelerate the folding of proteins [H]
COG id: COG0545
COG function: function code O; FKBP-type peptidyl-prolyl cis-trans isomerases 1
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PPIase FKBP-type domain [H]
Homologues:
Organism=Homo sapiens, GI17149836, Length=93, Percent_Identity=60.2150537634409, Blast_Score=115, Evalue=1e-26, Organism=Homo sapiens, GI4503725, Length=93, Percent_Identity=60.2150537634409, Blast_Score=115, Evalue=1e-26, Organism=Homo sapiens, GI4758380, Length=93, Percent_Identity=60.2150537634409, Blast_Score=112, Evalue=1e-25, Organism=Homo sapiens, GI224809331, Length=126, Percent_Identity=48.4126984126984, Blast_Score=100, Evalue=3e-22, Organism=Homo sapiens, GI206725530, Length=133, Percent_Identity=43.609022556391, Blast_Score=98, Evalue=2e-21, Organism=Homo sapiens, GI17149844, Length=133, Percent_Identity=43.609022556391, Blast_Score=98, Evalue=2e-21, Organism=Homo sapiens, GI17149842, Length=133, Percent_Identity=43.609022556391, Blast_Score=98, Evalue=2e-21, Organism=Homo sapiens, GI224809329, Length=126, Percent_Identity=48.4126984126984, Blast_Score=98, Evalue=2e-21, Organism=Homo sapiens, GI224809327, Length=126, Percent_Identity=48.4126984126984, Blast_Score=98, Evalue=2e-21, Organism=Homo sapiens, GI4758384, Length=126, Percent_Identity=48.4126984126984, Blast_Score=98, Evalue=2e-21, Organism=Homo sapiens, GI4503729, Length=102, Percent_Identity=51.9607843137255, Blast_Score=97, Evalue=6e-21, Organism=Homo sapiens, GI150010552, Length=121, Percent_Identity=36.3636363636364, Blast_Score=87, Evalue=5e-18, Organism=Homo sapiens, GI8923659, Length=97, Percent_Identity=46.3917525773196, Blast_Score=83, Evalue=6e-17, Organism=Homo sapiens, GI192448443, Length=117, Percent_Identity=41.8803418803419, Blast_Score=82, Evalue=2e-16, Organism=Homo sapiens, GI206725547, Length=96, Percent_Identity=45.8333333333333, Blast_Score=81, Evalue=2e-16, Organism=Homo sapiens, GI31317231, Length=97, Percent_Identity=46.3917525773196, Blast_Score=79, Evalue=2e-15, Organism=Homo sapiens, GI4503727, Length=112, Percent_Identity=41.0714285714286, Blast_Score=75, Evalue=2e-14, Organism=Homo sapiens, GI33469985, Length=92, Percent_Identity=42.3913043478261, Blast_Score=75, Evalue=2e-14, Organism=Homo sapiens, GI17149839, Length=55, Percent_Identity=58.1818181818182, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1789745, Length=114, Percent_Identity=50, Blast_Score=89, Evalue=9e-20, Organism=Escherichia coli, GI87082390, Length=111, Percent_Identity=45.045045045045, Blast_Score=82, Evalue=9e-18, Organism=Caenorhabditis elegans, GI71993519, Length=96, Percent_Identity=57.2916666666667, Blast_Score=105, Evalue=9e-24, Organism=Caenorhabditis elegans, GI17540882, Length=126, Percent_Identity=43.6507936507937, Blast_Score=100, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17561782, Length=93, Percent_Identity=53.763440860215, Blast_Score=87, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17561778, Length=100, Percent_Identity=45, Blast_Score=80, Evalue=4e-16, Organism=Caenorhabditis elegans, GI71993555, Length=72, Percent_Identity=50, Blast_Score=70, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17506169, Length=132, Percent_Identity=34.0909090909091, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17506167, Length=132, Percent_Identity=34.0909090909091, Blast_Score=67, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6320727, Length=93, Percent_Identity=56.989247311828, Blast_Score=100, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6324194, Length=93, Percent_Identity=54.8387096774194, Blast_Score=100, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6323566, Length=110, Percent_Identity=45.4545454545455, Blast_Score=87, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6323482, Length=110, Percent_Identity=45.4545454545455, Blast_Score=86, Evalue=2e-18, Organism=Drosophila melanogaster, GI281363946, Length=107, Percent_Identity=60.7476635514019, Blast_Score=126, Evalue=4e-30, Organism=Drosophila melanogaster, GI17352457, Length=107, Percent_Identity=60.7476635514019, Blast_Score=126, Evalue=4e-30, Organism=Drosophila melanogaster, GI24655568, Length=93, Percent_Identity=62.3655913978495, Blast_Score=119, Evalue=6e-28, Organism=Drosophila melanogaster, GI24647110, Length=116, Percent_Identity=50.8620689655172, Blast_Score=106, Evalue=4e-24, Organism=Drosophila melanogaster, GI24583150, Length=102, Percent_Identity=52.9411764705882, Blast_Score=99, Evalue=1e-21, Organism=Drosophila melanogaster, GI21356629, Length=125, Percent_Identity=48, Blast_Score=85, Evalue=2e-17,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001179 [H]
Pfam domain/function: PF00254 FKBP_C [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 14375; Mature: 14243
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: PS50059 FKBP_PPIASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLSPLFGAALIAMTTAANAETVTTPSGLKYQDEVVGTGPEPKAGQTVTVQYTGWLDEG CCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEECCCCCCCCCCEEEEEEECEECCC GKKGKKFDSSRDRNQPFSFPLGAGQVIKGWDEGVATMKAGGKRTLIIPPQLGYGARGAGG CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEECCCCCEEEEECCCCCCCCCCCCC VIPPNATLIFDVELLGAK CCCCCCEEEEEEEEECCC >Mature Secondary Structure PRLSPLFGAALIAMTTAANAETVTTPSGLKYQDEVVGTGPEPKAGQTVTVQYTGWLDEG CCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEECCCCCCCCCCEEEEEEECEECCC GKKGKKFDSSRDRNQPFSFPLGAGQVIKGWDEGVATMKAGGKRTLIIPPQLGYGARGAGG CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEECCCCCEEEEECCCCCCCCCCCCC VIPPNATLIFDVELLGAK CCCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10761919 [H]