| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is plp [H]
Identifier: 170747170
GI number: 170747170
Start: 775115
End: 776050
Strand: Reverse
Name: plp [H]
Synonym: Mrad2831_0736
Alternate gene names: 170747170
Gene position: 776050-775115 (Counterclockwise)
Preceding gene: 170747178
Following gene: 170747167
Centisome position: 12.77
GC content: 69.87
Gene sequence:
>936_bases ATGCCGAACACCGCCCTTCTCCGGCGCGTCAGCGCGCTCGCCGTCATGATCGCGATGCCGGGACTGGCGCTGGCCCAGGC ACCCCAGAAGGCCCCGACGCCGGCCGCCAACACGCCGGCGGCCCCCGCCGCGACGCCGGCCGCCGCGACGCCGGCTGCCG CGCCGAGCGCGGACGCGGTCGTGGCGAGCGTCAATGGCAAGCCGATCACCCAGGGCGACCTCGCCATCGCGGCCGATGAC CCGGCCCTGTCGCTGCCCGGCGTCGACGAGGCGCAGAAGAAGAACCTGCTCGTCGACTACATGGTCGACCTCCGCGTCGG TGCGCAGGCCGCCGAGGCCGCCAAGATCGGCGACACGCCGGAGTTCAAGCGCAAGCTCGCCTATTTCCGCGACAAGCTCC TGCTCGACGACTACCTGGAGCAGGAGGCCAAGCGCGCGGTCACGCCCGAGGCGGAGCACGCGATCTACGACCAGACCGTC AAGCTGATGAAGCCCGAGGAGGAGGTGCACGCGCGCCACATCCTGGTGGACAACGAGGCCGAGGCCAAGAAGATCGCCGC GCGCATCAAGGGCGGCGAGGATTTCGCCAAGGTCGCCGCCGAGGCGTCGAAGGACCCGGGCTCGAAGGCCGAGGGCGGCG ATCTCGGCTGGTTCACCAAGGAGCGGATGGTGCCCGACTTCGCCAACGCCGCCTTCGCGATGAAGGCCGGCCAGGTCTCC GACCCGATCAAGACCCAGTTCGGCTGGCACGTGATCAAGGTCGAGGAGAAGCGGACCAAGCCGCAGCCGACCTTCGACGA GCTCAAGGAGCAGATCGACCAGCACCTGATCCGCAAGGCGCAGCAGGACATGATCCTGAAGCTCCGCTCGGAGGCCAAGA TCGAGCGCGCCGACGCGCCGCCGGCCGCGCAGACTGCGCCCGAACCGAAGAAGTAG
Upstream 100 bases:
>100_bases CCGCGCTTGCCTTCTCGCCCGACGCGGGCCACCTGTGCCGCGGCGCGACGCCCGGCCGATCCGGCGCGACGCCGAGACGT GAGCCGAGGACTTCGCCCGT
Downstream 100 bases:
>100_bases CGCTCGGCGCCCGACCGGCGCGGCCCCCGGGGCCGCGCCCCGTCGTCAGTACGGCCGGTCCGGGACGAGGTAGCTGGACT GCGCCGGGGCCGGCTGGGGC
Product: PpiC-type peptidyl-prolyl cis-trans isomerase
Products: NA
Alternate protein names: Peptidyl-prolyl cis-trans isomerase plp; Rotamase plp [H]
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MPNTALLRRVSALAVMIAMPGLALAQAPQKAPTPAANTPAAPAATPAAATPAAAPSADAVVASVNGKPITQGDLAIAADD PALSLPGVDEAQKKNLLVDYMVDLRVGAQAAEAAKIGDTPEFKRKLAYFRDKLLLDDYLEQEAKRAVTPEAEHAIYDQTV KLMKPEEEVHARHILVDNEAEAKKIAARIKGGEDFAKVAAEASKDPGSKAEGGDLGWFTKERMVPDFANAAFAMKAGQVS DPIKTQFGWHVIKVEEKRTKPQPTFDELKEQIDQHLIRKAQQDMILKLRSEAKIERADAPPAAQTAPEPKK
Sequences:
>Translated_311_residues MPNTALLRRVSALAVMIAMPGLALAQAPQKAPTPAANTPAAPAATPAAATPAAAPSADAVVASVNGKPITQGDLAIAADD PALSLPGVDEAQKKNLLVDYMVDLRVGAQAAEAAKIGDTPEFKRKLAYFRDKLLLDDYLEQEAKRAVTPEAEHAIYDQTV KLMKPEEEVHARHILVDNEAEAKKIAARIKGGEDFAKVAAEASKDPGSKAEGGDLGWFTKERMVPDFANAAFAMKAGQVS DPIKTQFGWHVIKVEEKRTKPQPTFDELKEQIDQHLIRKAQQDMILKLRSEAKIERADAPPAAQTAPEPKK >Mature_310_residues PNTALLRRVSALAVMIAMPGLALAQAPQKAPTPAANTPAAPAATPAAATPAAAPSADAVVASVNGKPITQGDLAIAADDP ALSLPGVDEAQKKNLLVDYMVDLRVGAQAAEAAKIGDTPEFKRKLAYFRDKLLLDDYLEQEAKRAVTPEAEHAIYDQTVK LMKPEEEVHARHILVDNEAEAKKIAARIKGGEDFAKVAAEASKDPGSKAEGGDLGWFTKERMVPDFANAAFAMKAGQVSD PIKTQFGWHVIKVEEKRTKPQPTFDELKEQIDQHLIRKAQQDMILKLRSEAKIERADAPPAAQTAPEPKK
Specific function: Assist In The Folding Of Extracytoplasmic Proteins. Essential For The Survival Of E.Coli In Stationary Phase. [C]
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PpiC domain [H]
Homologues:
Organism=Homo sapiens, GI38679892, Length=96, Percent_Identity=37.5, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI1786238, Length=102, Percent_Identity=45.0980392156863, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1790211, Length=84, Percent_Identity=44.047619047619, Blast_Score=70, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17537235, Length=96, Percent_Identity=41.6666666666667, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI21356303, Length=96, Percent_Identity=39.5833333333333, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: 400 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000297 - InterPro: IPR023058 - InterPro: IPR008880 [H]
Pfam domain/function: PF00639 Rotamase [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 33386; Mature: 33255
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: PS01096 PPIC_PPIASE_1 ; PS50198 PPIC_PPIASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNTALLRRVSALAVMIAMPGLALAQAPQKAPTPAANTPAAPAATPAAATPAAAPSADAV CCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE VASVNGKPITQGDLAIAADDPALSLPGVDEAQKKNLLVDYMVDLRVGAQAAEAAKIGDTP EEECCCCCCCCCCEEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHCCHHHHHHHCCCCH EFKRKLAYFRDKLLLDDYLEQEAKRAVTPEAEHAIYDQTVKLMKPEEEVHARHILVDNEA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHEEEECCCH EAKKIAARIKGGEDFAKVAAEASKDPGSKAEGGDLGWFTKERMVPDFANAAFAMKAGQVS HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCC DPIKTQFGWHVIKVEEKRTKPQPTFDELKEQIDQHLIRKAQQDMILKLRSEAKIERADAP CCHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PAAQTAPEPKK CCCCCCCCCCC >Mature Secondary Structure PNTALLRRVSALAVMIAMPGLALAQAPQKAPTPAANTPAAPAATPAAATPAAAPSADAV CCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE VASVNGKPITQGDLAIAADDPALSLPGVDEAQKKNLLVDYMVDLRVGAQAAEAAKIGDTP EEECCCCCCCCCCEEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHCCHHHHHHHCCCCH EFKRKLAYFRDKLLLDDYLEQEAKRAVTPEAEHAIYDQTVKLMKPEEEVHARHILVDNEA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHEEEECCCH EAKKIAARIKGGEDFAKVAAEASKDPGSKAEGGDLGWFTKERMVPDFANAAFAMKAGQVS HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCC DPIKTQFGWHVIKVEEKRTKPQPTFDELKEQIDQHLIRKAQQDMILKLRSEAKIERADAP CCHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PAAQTAPEPKK CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA