| Definition | Shewanella woodyi ATCC 51908 chromosome, complete genome. |
|---|---|
| Accession | NC_010506 |
| Length | 5,935,403 |
Click here to switch to the map view.
The map label for this gene is metH
Identifier: 170728413
GI number:
Start: 4960016
End: 4963771
Strand: Direct
Name: metH
Synonym: Swoo_4088
Alternate gene names: NA
Gene position: NA
Preceding gene: 170728390
Following gene: 170728414
Centisome position: NA
GC content: NA
Gene sequence:
>3756_bases ATGACCACTGGAACCCTAAGAACCAAAAACATAAAAGCGAAAGGCCAACAACTCGAGCAGCAGCTAAAGCAGCAACTGAG CGATGGGATCCTTATCCTAGATGGCGCCATGGGCACCATGATCCAAGACTGCAAATTCGAAGAGGATGCCTTTCGTGGTG AGCAGTTTAAGGAGTGGCATTGCGATGTTAAGGGCAACAACGACATGTTGGTGCTCACCCAGCCAGATGCGATTAAACAG ATCCATAAAGATTACCTACTGGCTGGTGCCGATATTATCGAGACCAACACCTTCAACGCGACTCGTATCGCCATGGCCGA TTACGACATGCAGGAGCATTCGGCCTCGATCAACCTTGAGGGTGCTCGCTTAGCCCGCGCCGCTGCCGATGAAGTCGAAC AAGAGACTGGCCGAAGCTGTTATGTGGCGGGTGTTCTCGGACCAACCAACCGAACCTGTTCAATCAGTCCCGATGTCAAC GACCCTGGCTACCGTAATGTTAGCTTCGATGAATTAGTCGAAGCCTATATTGAGTCTATCAATGCATTAGTCCAAGGCGG CGCCGATATCCTCATGGTGGAAACCATCTTCGATACGCTCAACGCCAAAGCGGCACTGTTTGCTATTGAAACCGTATTTG ATGAGCAAGATTTCCGTTTGCCTATCATGATCTCAGGCACCATAACCGATGCCTCAGGCCGTACCCTTACCGGACAAACC ACCGAAGCCTTCTACAACTCATTACGTCACGTTAAGCCACTCTCTATCGGCCTTAACTGTGCATTAGGACCAAAAGAGCT GCGTCCATATGTAGAAGAGTTATCAAAAATTTCTGAGTGTTTCGTCTCGGCGCACCCCAATGCGGGGCTGCCAAATGAGT TTGGTGGTTATGATGAAACCCCCAAACAGATGGCCGATATCATTGGCGAGTGGGCCGAGGAGGGCTTCCTCAATATTATC GGTGGCTGTTGTGGTACTACACCCGATCACATCCGCGTCATTCGTGAAGCTGTGATTAAGCACCCGGCGCGTAAACTGCC TGATATTCCAGTGGCTTGTCGTCTCTCAGGCCTTGAGCCTCTGACCATAGATGAGAACTCACTCTTCCTAAACGTAGGTG AGCGTACCAACGTCACTGGCTCTGCCAAGTTTCTGCGCCTGATTAAAACTGGCGAATATGAAGAAGCACTGAGTGTCGCC CGCGATCAAGTGGAAAACGGCGCTCAGATCATCGATATCAATATGGATGAGGGGATGCTCGACGGCGTCGAGGTGATGCA CAAATTCCTCAATCTTATCGCTTCAGAGCCAGATATCTCTCGCGTACCGATTATGATCGACTCCTCCAAATGGGAGGTGA TCGAAGCCGGTCTTAAATGCATTCAAGGCAAAGGGATCGTTAACTCCATCTCCCTAAAAGAGGGCGAAGAGAAGTTTATT GAGCAAGCCAAACTGGTTAAACGATATGGCGCTGCTGCCATTATCATGGCCTTCGATGAAACAGGCCAAGCGGACACCGA GGCGCGCAAAGTCGAGATCTGTACTCGCGCCTATAACGTCTTAGTCGACAAGGTTGGCTTCCCACCAGAAGATATTATCT TTGACCCCAACATCTTCGCCATCGCCACCGGTATCGAGGAGCATGATAACTACGCCGTCGATTTTATCGAGGCAACCCGC GAGATAAAGCGCACTCTACCCCACGCAATGATCTCGGGCGGTGTCTCCAATGTCTCCTTCTCATTTCGCGGTAATAACCC GGTGCGAGAAGCAATTCACGCCGTGTTCCTCTATCACGCGATTCAAGCTGGCATGGACATGGGTATCGTTAACGCTGGGC AGCTGGCCATTTATGACGATATCGACCCAGAACTCAAAGAGAAAGTTGAAGCCATAGTACAAAACCTCCCCTGCAGCGCA GTGGATAAAAACGGTGAAGCAACCAATAACACCGAACAGCTACTAGAGGTCGCGGAAAAATTCCGTGGCGATGGGGCTCA GGCTGGTAAAAAAGAGGATCTCGAGTGGCGCACTAAACCGGTTAACGAGCGTTTAGCTCACGCACTGGTCAAGGGCATTA CCGACTATATCGATGAGGATACCGAAGAGGCGCGTACAGCGGCCACCAGACCACTGGATGTCATTGAAGGTCCGCTGATG GACGGCATGAACATCGTTGGCGATCTCTTTGGCTCCGGCAAGATGTTCCTACCACAGGTGGTAAAATCCGCCCGCGTGAT GAAAAAAGCTGTGGCTTACCTCAACCCTTACATCGAGCTTGAAAAGGTCGCCGGTCAATCTAACGGTAAGATCTTAATGG TCACGGTAAAAGGTGACGTACACGATATTGGCAAGAACATTGTTGGCGTGGTACTGGCCTGTAACGGCTATGAGGTGATT GATCTCGGTGTGATGGTCCCTGTAGAGAAAATCATTGAGGTCGCCAAAGCGGAGAATGTCGATATTATCGGGATGTCAGG ACTTATCACCCCGAGTCTAGACGAGATGGTGCATAACGTTAAAAGCTTCCATAAAGCGGGCCTCACCATCCCTTCGATTA TTGGTGGTGCCACCTGCTCTAAAATTCACACCGCAGTGAAAATAGCCCCACATGCACCAACGGGCGCCATCTATATTGCC GATGCTTCGCGCGCCGTCCCTATGGTTTCTAAGCTCATTAACGATGACACTCGTCAAGCCACCATAGATGAAGCCTATAA CGAATATGATGTGATGCGTGAAAAACGCCTGTCACAGGCTAAACGTAAAATGATCACCTCAATCGAAGCTGCCCGTGAAA ATCGTTGTCAGCACGACTGGGAGAGCTACACCCCATTTGTGCCTAACCAACTAGGTCGTCAGGTATTCGATGATTATCCA CTAGAAGATCTCGTCGATCGCATCGACTGGACACCGTTTTTCCGCAGCTGGGAGCTGCACGGTCACTTCCCTAAGATTTT AGATGATGAAGTCGTGGGTGAAGAGGCACGTAAACTGTTTAGCGACGGTAAGGCCATGCTTAAGAAGATCATCGATGAGA AGTGGCTCACCGCCAAAGGCGTTATCGGTCTGTTCCCTGCAAATACCGTGGGACATGACGACATAGAGCTTTACACTGAT GAAAGCCGTAGTGAACTTGAGATGACGACCCATCATCTGCGGATGCAGATTGAACGTGTGGGCAATGACAACTTCTGCCT CGCCGACTTTGTCGCCCCTAAAGACTCTGGCGTAGCCGATTACATGGGTGGCTTTGCAGTTACCGCAGGTCACGGTATCG ACGAGCATGTTGAGCGTTTCGAGGCTGACCACGATGACTACAGCGCCATTATGCTCAAGTGTCTGGCAGACCGCTTGGCT GAAGCCTTCGCCGAACGTATGCATGAGCGTGTCCGTAAAGAGTTCTGGGGTTATGCTGCCGATGAGGTACTCGATAACGA AGCGCTTATTCGTGAAAAATACAAAGGGATCCGCCCCGCACCGGGTTACCCAGCTTGTCCCGATCACACCGAGAAAGGCT TGCTATGGGATCTACTAAAACCCGATGAAACTATCGGTCTTAACATCACTGAAAGCTTTGCTATGTTCCCCACCGCCGCA GTATCAGGCTGGTATTTTGCCCATCCTAAATCACGCTACTTTGGTGTGACCAATATTGGACGCGATCAGGTAGAAGATTA TGCAGCGCGTAAGGGGATGAGTGTGGAGGAGGTTGAGAGGTGGCTAGCACCAGTGTTGGATTATGATCCGGAGTAA
Upstream 100 bases:
>100_bases AAATTGGTATAAAAACAGAGTAAACATCTGAAAGTATAGATTTATAATATAGGCACACGCTTGAGCCTGAGCAATTAAGT CGTTAAAACAGGTAGAATTT
Downstream 100 bases:
>100_bases TCATAGGTTTACTCTTTTCATGTCCAAACTTCGTTTGGATTAAGGTCGCAGGGTTCCACCCTGCACTGGGCAAGAAGGAC TGCTCGTCCTATCCTCCTTG
Product: B12-dependent methionine synthase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1251_residues MTTGTLRTKNIKAKGQQLEQQLKQQLSDGILILDGAMGTMIQDCKFEEDAFRGEQFKEWHCDVKGNNDMLVLTQPDAIKQ IHKDYLLAGADIIETNTFNATRIAMADYDMQEHSASINLEGARLARAAADEVEQETGRSCYVAGVLGPTNRTCSISPDVN DPGYRNVSFDELVEAYIESINALVQGGADILMVETIFDTLNAKAALFAIETVFDEQDFRLPIMISGTITDASGRTLTGQT TEAFYNSLRHVKPLSIGLNCALGPKELRPYVEELSKISECFVSAHPNAGLPNEFGGYDETPKQMADIIGEWAEEGFLNII GGCCGTTPDHIRVIREAVIKHPARKLPDIPVACRLSGLEPLTIDENSLFLNVGERTNVTGSAKFLRLIKTGEYEEALSVA RDQVENGAQIIDINMDEGMLDGVEVMHKFLNLIASEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISLKEGEEKFI EQAKLVKRYGAAAIIMAFDETGQADTEARKVEICTRAYNVLVDKVGFPPEDIIFDPNIFAIATGIEEHDNYAVDFIEATR EIKRTLPHAMISGGVSNVSFSFRGNNPVREAIHAVFLYHAIQAGMDMGIVNAGQLAIYDDIDPELKEKVEAIVQNLPCSA VDKNGEATNNTEQLLEVAEKFRGDGAQAGKKEDLEWRTKPVNERLAHALVKGITDYIDEDTEEARTAATRPLDVIEGPLM DGMNIVGDLFGSGKMFLPQVVKSARVMKKAVAYLNPYIELEKVAGQSNGKILMVTVKGDVHDIGKNIVGVVLACNGYEVI DLGVMVPVEKIIEVAKAENVDIIGMSGLITPSLDEMVHNVKSFHKAGLTIPSIIGGATCSKIHTAVKIAPHAPTGAIYIA DASRAVPMVSKLINDDTRQATIDEAYNEYDVMREKRLSQAKRKMITSIEAARENRCQHDWESYTPFVPNQLGRQVFDDYP LEDLVDRIDWTPFFRSWELHGHFPKILDDEVVGEEARKLFSDGKAMLKKIIDEKWLTAKGVIGLFPANTVGHDDIELYTD ESRSELEMTTHHLRMQIERVGNDNFCLADFVAPKDSGVADYMGGFAVTAGHGIDEHVERFEADHDDYSAIMLKCLADRLA EAFAERMHERVRKEFWGYAADEVLDNEALIREKYKGIRPAPGYPACPDHTEKGLLWDLLKPDETIGLNITESFAMFPTAA VSGWYFAHPKSRYFGVTNIGRDQVEDYAARKGMSVEEVERWLAPVLDYDPE
Sequences:
NA
Specific function: NA
COG id: COG1410
COG function: function code E; Methionine synthase I, cobalamin-binding domain
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA