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The map label for this gene is yagV [H]

Identifier: 170684180

GI number: 170684180

Start: 320869

End: 321579

Strand: Reverse

Name: yagV [H]

Synonym: EcSMS35_0315

Alternate gene names: 170684180

Gene position: 321579-320869 (Counterclockwise)

Preceding gene: 170682359

Following gene: 170682597

Centisome position: 6.34

GC content: 53.16

Gene sequence:

>711_bases
ATGTTCAGGCGACGTGGCGTAACATTAACTAAGGCCCTGCTGACAGTGGTCTGTATGCTGGCGGCACCTTTGACACAGGC
GATTTCGGTCGGCAATCTGACATTTTCGCTGCCGTCCGAGACTGACTTTGTCAGCAAACGTGTAGTGAATAACAACAAAA
GCGCGCGGATATACCGTATTGCCATCAGTGCTATCGATAGCCCGGGCAGCAGTGAATTGCGCACTCGACCGGTGGATGGT
GAACTGCTTTTCGCCCCCCGCCAGCTGGCGTTGCAGGCTGGTGAGAGCGAGTATTTTAAATTTTACTATCATGGTCCACA
GGATAACCGCGAGCGCTACTACCGGGTCTCATTTCGCGAGGTCCCCACTCGCAACCAGACAAGACGTAGCCCAACCGGCG
GCGAGGTCAGCACAGAGCCGGTGGTGGTGATGGATACCATTCTGGTAGTACGACCACGTCAGGTTCAGTTTAAATGGTCC
TTCGACCAGGTGACAGGAACGGTAAGTAACACCGGCAACACGTGGTTTAAGCTACTGATTAAACCAGGATGTGATTCGAC
CGAAGAGGAAGGCGATGCCTGGTATCTACGTCCGGGAGACGTGGTTCATCAGCCTGAGTTACGTCAGCCGGGGAATCACT
ATCTGGTCTATAACGACAAATTCATTAAGATTAGCGATTCCTGTCCGGCTAAGCCCCCTTCGGCGGACTAA

Upstream 100 bases:

>100_bases
ACCACAGTCAAATTTTCGATTCCAATGGATAACGCCATTTCGCTGCGTACGGTAGATGATAACGGCTGGTTTGGCGAAGT
CAGCGCTTCAGGAGAGATTC

Downstream 100 bases:

>100_bases
GACTTATCCATCAGACGAGGGAAGAATTCCACCTCAGAGACTCAAAAATCGTTTAAATGATGTGGAAGCGATCGTCAATG
TCACCTGTAACGATGAGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MFRRRGVTLTKALLTVVCMLAAPLTQAISVGNLTFSLPSETDFVSKRVVNNNKSARIYRIAISAIDSPGSSELRTRPVDG
ELLFAPRQLALQAGESEYFKFYYHGPQDNRERYYRVSFREVPTRNQTRRSPTGGEVSTEPVVVMDTILVVRPRQVQFKWS
FDQVTGTVSNTGNTWFKLLIKPGCDSTEEEGDAWYLRPGDVVHQPELRQPGNHYLVYNDKFIKISDSCPAKPPSAD

Sequences:

>Translated_236_residues
MFRRRGVTLTKALLTVVCMLAAPLTQAISVGNLTFSLPSETDFVSKRVVNNNKSARIYRIAISAIDSPGSSELRTRPVDG
ELLFAPRQLALQAGESEYFKFYYHGPQDNRERYYRVSFREVPTRNQTRRSPTGGEVSTEPVVVMDTILVVRPRQVQFKWS
FDQVTGTVSNTGNTWFKLLIKPGCDSTEEEGDAWYLRPGDVVHQPELRQPGNHYLVYNDKFIKISDSCPAKPPSAD
>Mature_236_residues
MFRRRGVTLTKALLTVVCMLAAPLTQAISVGNLTFSLPSETDFVSKRVVNNNKSARIYRIAISAIDSPGSSELRTRPVDG
ELLFAPRQLALQAGESEYFKFYYHGPQDNRERYYRVSFREVPTRNQTRRSPTGGEVSTEPVVVMDTILVVRPRQVQFKWS
FDQVTGTVSNTGNTWFKLLIKPGCDSTEEEGDAWYLRPGDVVHQPELRQPGNHYLVYNDKFIKISDSCPAKPPSAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the matC family [H]

Homologues:

Organism=Escherichia coli, GI87081712, Length=236, Percent_Identity=97.8813559322034, Blast_Score=481, Evalue=1e-137,
Organism=Escherichia coli, GI1786485, Length=196, Percent_Identity=29.5918367346939, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008962
- InterPro:   IPR016147 [H]

Pfam domain/function: PF00345 Pili_assembly_N [H]

EC number: NA

Molecular weight: Translated: 26649; Mature: 26649

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRRRGVTLTKALLTVVCMLAAPLTQAISVGNLTFSLPSETDFVSKRVVNNNKSARIYRI
CCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCEEEECCCCCHHHHHHHHCCCCCCEEEEE
AISAIDSPGSSELRTRPVDGELLFAPRQLALQAGESEYFKFYYHGPQDNRERYYRVSFRE
EEEECCCCCCCCCEECCCCCCEEECCHHHHEECCCCCEEEEEEECCCCCCCEEEEEEEEE
VPTRNQTRRSPTGGEVSTEPVVVMDTILVVRPRQVQFKWSFDQVTGTVSNTGNTWFKLLI
CCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEEEHHHEEEEECCCCCEEEEEEE
KPGCDSTEEEGDAWYLRPGDVVHQPELRQPGNHYLVYNDKFIKISDSCPAKPPSAD
CCCCCCCCCCCCEEEECCCCEECCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MFRRRGVTLTKALLTVVCMLAAPLTQAISVGNLTFSLPSETDFVSKRVVNNNKSARIYRI
CCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCEEEECCCCCHHHHHHHHCCCCCCEEEEE
AISAIDSPGSSELRTRPVDGELLFAPRQLALQAGESEYFKFYYHGPQDNRERYYRVSFRE
EEEECCCCCCCCCEECCCCCCEEECCHHHHEECCCCCEEEEEEECCCCCCCEEEEEEEEE
VPTRNQTRRSPTGGEVSTEPVVVMDTILVVRPRQVQFKWSFDQVTGTVSNTGNTWFKLLI
CCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEEEHHHEEEEECCCCCEEEEEEE
KPGCDSTEEEGDAWYLRPGDVVHQPELRQPGNHYLVYNDKFIKISDSCPAKPPSAD
CCCCCCCCCCCCEEEECCCCEECCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]