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The map label for this gene is yadC [H]

Identifier: 170682836

GI number: 170682836

Start: 160076

End: 161347

Strand: Reverse

Name: yadC [H]

Synonym: EcSMS35_0146

Alternate gene names: 170682836

Gene position: 161347-160076 (Counterclockwise)

Preceding gene: 170680339

Following gene: 170682456

Centisome position: 3.18

GC content: 38.6

Gene sequence:

>1272_bases
ATGAAGACATTCTTCAGATATTTTCTTTTTTTAATTCTGTGCTTGAGTTGTTATACCGCGAGTGCTGGCACTGATGATTT
CGTAGGATATGTTGTTGGGAATAACTACGGCGTTGGTCCGTCAGATCAAAAATGGAGAGAAACCGGGCCAAATGGAGATG
TGACAGTCGTGTTCAGGTATGGTACCAGTACAAATAATTTAGTATTTTATAAACCAACACAACTGGGTCCAACAGGGGTG
AAATTACATTGGAGTCAGTTAGATACTGCTTCTGGCGGAGGCTTTCTTTATTGTAACAGAAGCAATAACACCAGTGGCGG
GGCAATGCGTATCGAAAATGCAATGGTTGACTCTGGAAAAAGATATGGTAACCATAAACTATTCAATACATCTGTTCCCG
GTTTGTATTATACAATATTAATTTCAAATATGTGGTCAGCTTACGGTACTGTAACTAACGTTAGTTCACCAGGAATATAT
ATTGGTGATTCTGCAGAACAATATTTTTCATGGTACAATCCAAGCGAAAGCATATTATACCAAAGTTGTAACAATGCCAA
CACATCCAGCAAATATTGGGCTGTAGGCGGTATTTATCAAAATCTTACCATCGAATTTTATACAGATACCAACTTTGATC
CAACAGTAACTCAACAAGTTTCATTATCGCGCTCATCAAACTATTTATATTCATTTAAAGCTTATGGTGCTGGTATCGGC
ATTAACGAACACAGCTATTTTCTTCGAGTTGATTTTGACCTACTAAATATTAAATTAAGTAATCCCACTTGTTTTACAGC
TATGTTAAGTGGAACATCTGTTACTGGTTCTACGGTAAAAATGGGCGAGTATAGTGAAGCACAAATAAGAAACGGTGCCA
CACCGGTTCCTTTTGATATTTCACTTCAAAACTGCGTTCGTGTGACTAATATCGAGACAAAATTAGTTTCAACAAAGGTT
GGTACTGAAAACAGGCAACTCCTTGGTAACACTCTCACAGGAAATGGCGCAGCAAAAGGCGTTGGGGTATTGATTGAAGG
ATTAGCAAACAGTAAAAGTGCCCTCATGATACTGAAACCTAATGATTCAACTTCTGTTTATAAAGATAATACGGGCCAGA
CGCAGAATAACGATTCAGATGCGATTTACCCGGAAGATGACGGTATAACGTATCCACTTCATTTCCAGGCTACATTAAAA
CAAGACGGGAATATTGCTATTGAACCCGGCGAATTTAAAGCCACCAGCACTTTTCAGGTTACCTACCCCTGA

Upstream 100 bases:

>100_bases
CCGGCCAAATCATAAGCCATGTATTAATTGATATTTACTACGAGTAACATACCAAAAACAAATTACTGCGACTATTACAG
CAGTGGATGGTGGAGTGAAA

Downstream 100 bases:

>100_bases
TAACACTATCGCACCGCCAGACAACGGCGGTGCGATACGGATAAATCATTGCCCCCACCAATGTGACTGATAAAATGCGA
GACAGCACAACATTATTTAT

Product: putative fimbrial-like adhesin protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MKTFFRYFLFLILCLSCYTASAGTDDFVGYVVGNNYGVGPSDQKWRETGPNGDVTVVFRYGTSTNNLVFYKPTQLGPTGV
KLHWSQLDTASGGGFLYCNRSNNTSGGAMRIENAMVDSGKRYGNHKLFNTSVPGLYYTILISNMWSAYGTVTNVSSPGIY
IGDSAEQYFSWYNPSESILYQSCNNANTSSKYWAVGGIYQNLTIEFYTDTNFDPTVTQQVSLSRSSNYLYSFKAYGAGIG
INEHSYFLRVDFDLLNIKLSNPTCFTAMLSGTSVTGSTVKMGEYSEAQIRNGATPVPFDISLQNCVRVTNIETKLVSTKV
GTENRQLLGNTLTGNGAAKGVGVLIEGLANSKSALMILKPNDSTSVYKDNTGQTQNNDSDAIYPEDDGITYPLHFQATLK
QDGNIAIEPGEFKATSTFQVTYP

Sequences:

>Translated_423_residues
MKTFFRYFLFLILCLSCYTASAGTDDFVGYVVGNNYGVGPSDQKWRETGPNGDVTVVFRYGTSTNNLVFYKPTQLGPTGV
KLHWSQLDTASGGGFLYCNRSNNTSGGAMRIENAMVDSGKRYGNHKLFNTSVPGLYYTILISNMWSAYGTVTNVSSPGIY
IGDSAEQYFSWYNPSESILYQSCNNANTSSKYWAVGGIYQNLTIEFYTDTNFDPTVTQQVSLSRSSNYLYSFKAYGAGIG
INEHSYFLRVDFDLLNIKLSNPTCFTAMLSGTSVTGSTVKMGEYSEAQIRNGATPVPFDISLQNCVRVTNIETKLVSTKV
GTENRQLLGNTLTGNGAAKGVGVLIEGLANSKSALMILKPNDSTSVYKDNTGQTQNNDSDAIYPEDDGITYPLHFQATLK
QDGNIAIEPGEFKATSTFQVTYP
>Mature_423_residues
MKTFFRYFLFLILCLSCYTASAGTDDFVGYVVGNNYGVGPSDQKWRETGPNGDVTVVFRYGTSTNNLVFYKPTQLGPTGV
KLHWSQLDTASGGGFLYCNRSNNTSGGAMRIENAMVDSGKRYGNHKLFNTSVPGLYYTILISNMWSAYGTVTNVSSPGIY
IGDSAEQYFSWYNPSESILYQSCNNANTSSKYWAVGGIYQNLTIEFYTDTNFDPTVTQQVSLSRSSNYLYSFKAYGAGIG
INEHSYFLRVDFDLLNIKLSNPTCFTAMLSGTSVTGSTVKMGEYSEAQIRNGATPVPFDISLQNCVRVTNIETKLVSTKV
GTENRQLLGNTLTGNGAAKGVGVLIEGLANSKSALMILKPNDSTSVYKDNTGQTQNNDSDAIYPEDDGITYPLHFQATLK
QDGNIAIEPGEFKATSTFQVTYP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1786328, Length=424, Percent_Identity=62.7358490566038, Blast_Score=503, Evalue=1e-143,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779
- InterPro:   IPR017014 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 46306; Mature: 46306

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFFRYFLFLILCLSCYTASAGTDDFVGYVVGNNYGVGPSDQKWRETGPNGDVTVVFRY
CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCHHHHCCCCCCEEEEEEE
GTSTNNLVFYKPTQLGPTGVKLHWSQLDTASGGGFLYCNRSNNTSGGAMRIENAMVDSGK
CCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEHHHHCCCC
RYGNHKLFNTSVPGLYYTILISNMWSAYGTVTNVSSPGIYIGDSAEQYFSWYNPSESILY
CCCCCEEEECCCCCEEEEHHHHHHHHHHCCEEECCCCCEEECCCHHHHHEECCCCHHHHH
QSCNNANTSSKYWAVGGIYQNLTIEFYTDTNFDPTVTQQVSLSRSSNYLYSFKAYGAGIG
CCCCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEEEEECCCCC
INEHSYFLRVDFDLLNIKLSNPTCFTAMLSGTSVTGSTVKMGEYSEAQIRNGATPVPFDI
CCCCEEEEEEEEEEEEEEECCCEEEEEEECCCCCCCCEEECCCCCHHHHCCCCCCCEEEC
SLQNCVRVTNIETKLVSTKVGTENRQLLGNTLTGNGAAKGVGVLIEGLANSKSALMILKP
CHHHEEEEECCEEEEEEEECCCCCCEEECEEECCCCCCCCCEEEEEECCCCCCEEEEECC
NDSTSVYKDNTGQTQNNDSDAIYPEDDGITYPLHFQATLKQDGNIAIEPGEFKATSTFQV
CCCCCEEECCCCCCCCCCCCEECCCCCCEEEEEEEEEEECCCCCEEEECCCEEEEEEEEE
TYP
ECC
>Mature Secondary Structure
MKTFFRYFLFLILCLSCYTASAGTDDFVGYVVGNNYGVGPSDQKWRETGPNGDVTVVFRY
CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCHHHHCCCCCCEEEEEEE
GTSTNNLVFYKPTQLGPTGVKLHWSQLDTASGGGFLYCNRSNNTSGGAMRIENAMVDSGK
CCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEHHHHCCCC
RYGNHKLFNTSVPGLYYTILISNMWSAYGTVTNVSSPGIYIGDSAEQYFSWYNPSESILY
CCCCCEEEECCCCCEEEEHHHHHHHHHHCCEEECCCCCEEECCCHHHHHEECCCCHHHHH
QSCNNANTSSKYWAVGGIYQNLTIEFYTDTNFDPTVTQQVSLSRSSNYLYSFKAYGAGIG
CCCCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEEEEECCCCC
INEHSYFLRVDFDLLNIKLSNPTCFTAMLSGTSVTGSTVKMGEYSEAQIRNGATPVPFDI
CCCCEEEEEEEEEEEEEEECCCEEEEEEECCCCCCCCEEECCCCCHHHHCCCCCCCEEEC
SLQNCVRVTNIETKLVSTKVGTENRQLLGNTLTGNGAAKGVGVLIEGLANSKSALMILKP
CHHHEEEEECCEEEEEEEECCCCCCEEECEEECCCCCCCCCEEEEEECCCCCCEEEEECC
NDSTSVYKDNTGQTQNNDSDAIYPEDDGITYPLHFQATLKQDGNIAIEPGEFKATSTFQV
CCCCCEEECCCCCCCCCCCCEECCCCCCEEEEEEEEEEECCCCCEEEECCCEEEEEEEEE
TYP
ECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503; 8096212 [H]