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The map label for this gene is yadK [H]

Identifier: 170680339

GI number: 170680339

Start: 161401

End: 161997

Strand: Reverse

Name: yadK [H]

Synonym: EcSMS35_0147

Alternate gene names: 170680339

Gene position: 161997-161401 (Counterclockwise)

Preceding gene: 170681181

Following gene: 170682836

Centisome position: 3.2

GC content: 41.04

Gene sequence:

>597_bases
ATGCTTTCCTCTCAACTAAAAATTAAGATAAAAACAAGTCTGTTCCTGGCATTATTGTTTGCCACATCCAGTCCTGTATA
TGCAGGGCTGGATGTGGATATGGTTGCCAATATCAAGAACAGTACATGTAAAAGTGGCCTCAGTAACCTTGGTAATATCG
ACCTTGGTGTGGTTGGTGTGGATTATTTTTCTGGTAACGTCGCACCTGAAGATGATTATCCGGGTGGGAGAGAGTTCACT
ATCACTGTGACTGACTGCGCCATCCAGGGTTCTGGAAATGTGTTAAATCAGTTACATATTAACTTTAAACCGCTTAATGG
CGTGATGGCGACAGGCTCTCAGCAAATTTTTGCAAATGAAAATGTCGCCGGCGCTCAAAACGTAGGTGTAGTAATATTTT
CCACTCAGGACCCGGCTAATATATTTAATGTTCTTACCCCAGCGGGCAGTTCTCGTTCAATTTATCCGGTGATGACTGCT
GATTTAAACAATTCATCCTGGAAATTCTATACACGGATGCAAAAAATCAACCCTGTATTAAATGTCATGCCCGGCCAAAT
CATAAGCCATGTATTAATTGATATTTACTACGAGTAA

Upstream 100 bases:

>100_bases
AAAATAAAAGCAAAACCGACATCACTGCCGGTCCGTTTTCCGCACCTGCAACATTTTCTATCACCTATAACTAACAGGCC
ATTAAAGTCAGGGACCGATT

Downstream 100 bases:

>100_bases
CATACCAAAAACAAATTACTGCGACTATTACAGCAGTGGATGGTGGAGTGAAAATGAAGACATTCTTCAGATATTTTCTT
TTTTTAATTCTGTGCTTGAG

Product: putative fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MLSSQLKIKIKTSLFLALLFATSSPVYAGLDVDMVANIKNSTCKSGLSNLGNIDLGVVGVDYFSGNVAPEDDYPGGREFT
ITVTDCAIQGSGNVLNQLHINFKPLNGVMATGSQQIFANENVAGAQNVGVVIFSTQDPANIFNVLTPAGSSRSIYPVMTA
DLNNSSWKFYTRMQKINPVLNVMPGQIISHVLIDIYYE

Sequences:

>Translated_198_residues
MLSSQLKIKIKTSLFLALLFATSSPVYAGLDVDMVANIKNSTCKSGLSNLGNIDLGVVGVDYFSGNVAPEDDYPGGREFT
ITVTDCAIQGSGNVLNQLHINFKPLNGVMATGSQQIFANENVAGAQNVGVVIFSTQDPANIFNVLTPAGSSRSIYPVMTA
DLNNSSWKFYTRMQKINPVLNVMPGQIISHVLIDIYYE
>Mature_198_residues
MLSSQLKIKIKTSLFLALLFATSSPVYAGLDVDMVANIKNSTCKSGLSNLGNIDLGVVGVDYFSGNVAPEDDYPGGREFT
ITVTDCAIQGSGNVLNQLHINFKPLNGVMATGSQQIFANENVAGAQNVGVVIFSTQDPANIFNVLTPAGSSRSIYPVMTA
DLNNSSWKFYTRMQKINPVLNVMPGQIISHVLIDIYYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786329, Length=198, Percent_Identity=68.1818181818182, Blast_Score=286, Evalue=5e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21316; Mature: 21316

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSSQLKIKIKTSLFLALLFATSSPVYAGLDVDMVANIKNSTCKSGLSNLGNIDLGVVGV
CCCCEEEEEEHHHHHHHHHHHCCCCEEECCCEEEEECCCCHHHHHHHHHCCCCEEEEEEE
DYFSGNVAPEDDYPGGREFTITVTDCAIQGSGNVLNQLHINFKPLNGVMATGSQQIFANE
EEECCCCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCCEEECCCEEEEECC
NVAGAQNVGVVIFSTQDPANIFNVLTPAGSSRSIYPVMTADLNNSSWKFYTRMQKINPVL
CCCCCCCCCEEEEECCCCHHHHHEECCCCCCCEEEEEEEECCCCCCCCEEHHHHHHCHHH
NVMPGQIISHVLIDIYYE
HCCCHHHHHHHHEEEECC
>Mature Secondary Structure
MLSSQLKIKIKTSLFLALLFATSSPVYAGLDVDMVANIKNSTCKSGLSNLGNIDLGVVGV
CCCCEEEEEEHHHHHHHHHHHCCCCEEECCCEEEEECCCCHHHHHHHHHCCCCEEEEEEE
DYFSGNVAPEDDYPGGREFTITVTDCAIQGSGNVLNQLHINFKPLNGVMATGSQQIFANE
EEECCCCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCCEEECCCEEEEECC
NVAGAQNVGVVIFSTQDPANIFNVLTPAGSSRSIYPVMTADLNNSSWKFYTRMQKINPVL
CCCCCCCCCEEEEECCCCHHHHHEECCCCCCCEEEEEEEECCCCCCCCEEHHHHHHCHHH
NVMPGQIISHVLIDIYYE
HCCCHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]