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The map label for this gene is yadN [H]

Identifier: 170681382

GI number: 170681382

Start: 166703

End: 167287

Strand: Reverse

Name: yadN [H]

Synonym: EcSMS35_0152

Alternate gene names: 170681382

Gene position: 167287-166703 (Counterclockwise)

Preceding gene: 170680561

Following gene: 170680970

Centisome position: 3.3

GC content: 44.96

Gene sequence:

>585_bases
ATGTCTAAAAAATTAGGTTTTGCCCTGTCTGGTCTTATGCTGGCAATGGTTGCAGGTAATGCTTCTGCTGCACTGGACGG
TGGCCAATTAAATATCAGTGGTCTGGTAGTTGATAACACCTGTGAAACCCGTGTTGATGGTGGCAACAAAGATGGCCTGG
TGCTTCTGCAAACTGCAACTGTTGCTGAAATCAGTGCTGGCGTACTGAATGACACCGTAGGTGCTAAAGCTAAACCTTTC
AGCATCACCGTTGACTGCAGCAATGCAAACCCGAATCCTGGTAGCACCGCAAAAATGACCTTCGGTTCCGTGTTCTTTGG
CAACAGCAAAGGGACTCTGAACAACGATATGTCTATTAACACGCCTTCTGACGGCGTAAATATTGCCCTGCACAATATTG
ATGGTTCCACTATCAAACAGGTTCAAATTAACAACCCAGGCGATATTTACACAAAAACGCTGGACGCTACGACTAAATCT
GCAACCTATGATTTTAAAGCATCCTATGTCCGTGCTGAAGCAAGCCAGGCACCAACTGCTGGTTATGTTAAAACCAACAC
TGCATATACCATTACTTACCAGTAA

Upstream 100 bases:

>100_bases
TTGCTCATTAATATCTAACATTTGTTTCTTATATTCGTGTCATGAATAGTTACTCTTCAAACATGTAGTCTGACTAATGG
AATTTTATTCAAGGATTTTT

Downstream 100 bases:

>100_bases
TCCTTCGTTAGATTCATAAACTGAATATCTATGGGAGTAACTTTCTTAATAGTGGAATGTTACTCCCTATTTTAATTAAC
TCTGTCGGGAATGGTTTATG

Product: fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MSKKLGFALSGLMLAMVAGNASAALDGGQLNISGLVVDNTCETRVDGGNKDGLVLLQTATVAEISAGVLNDTVGAKAKPF
SITVDCSNANPNPGSTAKMTFGSVFFGNSKGTLNNDMSINTPSDGVNIALHNIDGSTIKQVQINNPGDIYTKTLDATTKS
ATYDFKASYVRAEASQAPTAGYVKTNTAYTITYQ

Sequences:

>Translated_194_residues
MSKKLGFALSGLMLAMVAGNASAALDGGQLNISGLVVDNTCETRVDGGNKDGLVLLQTATVAEISAGVLNDTVGAKAKPF
SITVDCSNANPNPGSTAKMTFGSVFFGNSKGTLNNDMSINTPSDGVNIALHNIDGSTIKQVQINNPGDIYTKTLDATTKS
ATYDFKASYVRAEASQAPTAGYVKTNTAYTITYQ
>Mature_193_residues
SKKLGFALSGLMLAMVAGNASAALDGGQLNISGLVVDNTCETRVDGGNKDGLVLLQTATVAEISAGVLNDTVGAKAKPFS
ITVDCSNANPNPGSTAKMTFGSVFFGNSKGTLNNDMSINTPSDGVNIALHNIDGSTIKQVQINNPGDIYTKTLDATTKSA
TYDFKASYVRAEASQAPTAGYVKTNTAYTITYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1786334, Length=194, Percent_Identity=92.2680412371134, Blast_Score=362, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 20058; Mature: 19926

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKLGFALSGLMLAMVAGNASAALDGGQLNISGLVVDNTCETRVDGGNKDGLVLLQTAT
CCCCHHHHHHHHEEEEECCCCCCEECCCEEEEEEEEECCCCCEEECCCCCCCEEEEEECC
VAEISAGVLNDTVGAKAKPFSITVDCSNANPNPGSTAKMTFGSVFFGNSKGTLNNDMSIN
EEHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCEEEE
TPSDGVNIALHNIDGSTIKQVQINNPGDIYTKTLDATTKSATYDFKASYVRAEASQAPTA
CCCCCEEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCC
GYVKTNTAYTITYQ
CEEECCCEEEEEEC
>Mature Secondary Structure 
SKKLGFALSGLMLAMVAGNASAALDGGQLNISGLVVDNTCETRVDGGNKDGLVLLQTAT
CCCHHHHHHHHEEEEECCCCCCEECCCEEEEEEEEECCCCCEEECCCCCCCEEEEEECC
VAEISAGVLNDTVGAKAKPFSITVDCSNANPNPGSTAKMTFGSVFFGNSKGTLNNDMSIN
EEHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCEEEE
TPSDGVNIALHNIDGSTIKQVQINNPGDIYTKTLDATTKSATYDFKASYVRAEASQAPTA
CCCCCEEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCC
GYVKTNTAYTITYQ
CEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]