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The map label for this gene is cse3 [C]

Identifier: 170681320

GI number: 170681320

Start: 2953516

End: 2954166

Strand: Reverse

Name: cse3 [C]

Synonym: EcSMS35_2884

Alternate gene names: 170681320

Gene position: 2954166-2953516 (Counterclockwise)

Preceding gene: 170680474

Following gene: 170681830

Centisome position: 58.29

GC content: 54.99

Gene sequence:

>651_bases
ATGTACCTCTCAAGAATAACCTTACATACCGGCCAGCTTTCGCCTGCGCAGTTGCTGCATCTGGTGGATCGCGGGGAATA
TGTGATGCATCAGTGGCTGTGGGATCTTTTTCCTGGCGGCAAAGAAAGGCAATTTCTTTATCGTCGGGAAGAACTCCAGG
GCGCGTTTCGCTTTTTTGTCCTGTCGCAGGAACGCCCGGCGGAAAGTGAAACGTTCACCATCGAATGCCGGTCATTTGCG
CCTGAACTGCATACCGGACAATCCCTTTGTTTCAACCTGCGGGCGAATCCAACAGTCTGTAAAGCGGGTAAGCGCCACGA
TCTGCTGATGGAGGCGAAACGGCAGGTGAGGGGGCAGGCGGAAGGAAGAAATGTCTGGTTGCATCAACAACAGGCGGCGC
TGGACTGGCTGGCAGCGCAGGGGGAGAGAAGCGGTTTTACACTGCTGGATACCTCGGTCGATGCCTACCGACAACAGCAA
CTGCGGCGGGAAAACTCCCGGCAACTGATCCAGTTCAGTAGCGTGGATTATACAGGGATGCTTACAGTCACCGATCCAGG
GTTATTTCTGCAACGTCTCTGCCTGGGGTATGGCAAAAGCCGGGCGTTCGGCTGTGGTCTGATGTTAATCAAACCCGGAG
CAGAGGCGTGA

Upstream 100 bases:

>100_bases
GCAAAATATTACGCCGCCGGGATGTTCCTTTAAATCGTCAGCAGTGGCTGTTTGGGGAACGCACCGTCAATCAGGGGCCG
TGGCTCAGCAAGGAGGAACC

Downstream 100 bases:

>100_bases
CGTTTGTACCACTGAGTCCGATCCCGTTAAAAGATCGCACATCTATGATCTTCCTCCAGTACGGTCAGGTCGACGTACTG
GACGGCGCTTTCGTGCTGAT

Product: CRISPR-associated Cse3 family protein

Products: NA

Alternate protein names: CRISPR-Associated Cse3 Family Protein; Cse3 Family CRISPR-Associated Protein; CRISPR-Associated Protein; Cytoplasmic Protein; CRISPR-Associated Protein Cse3 Family Protein; CRISPR-Associated Protein CT

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQERPAESETFTIECRSFA
PELHTGQSLCFNLRANPTVCKAGKRHDLLMEAKRQVRGQAEGRNVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQ
LRRENSRQLIQFSSVDYTGMLTVTDPGLFLQRLCLGYGKSRAFGCGLMLIKPGAEA

Sequences:

>Translated_216_residues
MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQERPAESETFTIECRSFA
PELHTGQSLCFNLRANPTVCKAGKRHDLLMEAKRQVRGQAEGRNVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQ
LRRENSRQLIQFSSVDYTGMLTVTDPGLFLQRLCLGYGKSRAFGCGLMLIKPGAEA
>Mature_216_residues
MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQERPAESETFTIECRSFA
PELHTGQSLCFNLRANPTVCKAGKRHDLLMEAKRQVRGQAEGRNVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQ
LRRENSRQLIQFSSVDYTGMLTVTDPGLFLQRLCLGYGKSRAFGCGLMLIKPGAEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24756; Mature: 24756

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFV
CCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEE
LSQERPAESETFTIECRSFAPELHTGQSLCFNLRANPTVCKAGKRHDLLMEAKRQVRGQA
ECCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCC
EGRNVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENSRQLIQFSSVDYTGM
CCCEEEEEHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHCCHHEEEECCCCEEEE
LTVTDPGLFLQRLCLGYGKSRAFGCGLMLIKPGAEA
EEEECHHHHHHHHHHHCCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFV
CCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEE
LSQERPAESETFTIECRSFAPELHTGQSLCFNLRANPTVCKAGKRHDLLMEAKRQVRGQA
ECCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCC
EGRNVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENSRQLIQFSSVDYTGM
CCCEEEEEHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHCCHHEEEECCCCEEEE
LTVTDPGLFLQRLCLGYGKSRAFGCGLMLIKPGAEA
EEEECHHHHHHHHHHHCCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA